FFCP PHASE1:Hg19::chr12:71031220..71031229,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5787 | |EntrezGene=5787 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9665 | |HGNC=9665 | ||
|TSSclassifier=strong | |||
|UniProt=P23467,Q86VA4 | |UniProt=P23467,Q86VA4 | ||
|association_with_transcript=0bp_to_ENST00000334414,ENST00000552253,NM_001109754_5end | |association_with_transcript=0bp_to_ENST00000334414,ENST00000552253,NM_001109754_5end | ||
|cluster_id=chr12:71031220..71031229,- | |||
|coexpression_cluster_id=C428 | |coexpression_cluster_id=C428 | ||
|description=CAGE_peak_10_at_PTPRB_5end | |description=CAGE_peak_10_at_PTPRB_5end | ||
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|ontology_enrichment_celltype=CL:0002139!1.01e-41!24;CL:0000115!1.14e-31!35;CL:0000071!3.65e-29!18;CL:0002546!3.65e-29!18;CL:0002078!1.38e-23!44;CL:0000213!1.73e-16!57;CL:0000215!1.73e-16!57;CL:1000413!2.43e-15!9;CL:0005020!3.02e-14!6;CL:0002138!3.02e-14!6;CL:0005022!3.02e-14!6;CL:0002543!9.28e-14!6;CL:0002544!1.69e-09!6;CL:0002618!9.56e-08!3 | |ontology_enrichment_celltype=CL:0002139!1.01e-41!24;CL:0000115!1.14e-31!35;CL:0000071!3.65e-29!18;CL:0002546!3.65e-29!18;CL:0002078!1.38e-23!44;CL:0000213!1.73e-16!57;CL:0000215!1.73e-16!57;CL:1000413!2.43e-15!9;CL:0005020!3.02e-14!6;CL:0002138!3.02e-14!6;CL:0005022!3.02e-14!6;CL:0002543!9.28e-14!6;CL:0002544!1.69e-09!6;CL:0002618!9.56e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.05e-115;24!CL:0000071;1.30e-74;18!CL:0000115;9.28e-65;36!CL:0002138;8.99e-44;6!CL:0002543;4.85e-42;6!CL:0002078;4.40e-39;45!CL:1000413;2.86e-38;9!CL:0000213;2.59e-27;58!CL:0000215;2.59e-27;58!CL:0002618;5.18e-22;3!CL:0002544;1.18e-19;6!CL:0000076;2.25e-11;63 | |ontology_enrichment_celltype_v019=CL:0002139;1.05e-115;24!CL:0000071;1.30e-74;18!CL:0000115;9.28e-65;36!CL:0002138;8.99e-44;6!CL:0002543;4.85e-42;6!CL:0002078;4.40e-39;45!CL:1000413;2.86e-38;9!CL:0000213;2.59e-27;58!CL:0000215;2.59e-27;58!CL:0002618;5.18e-22;3!CL:0002544;1.18e-19;6!CL:0000076;2.25e-11;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.00e-116,24;CL:0000115,3.06e-76,36;CL:0000071,6.88e-75,18;CL:0002546,6.88e-75,18;CL:0002078,2.82e-60,45;CL:0000213,5.96e-46,58;CL:0000215,5.96e-46,58;CL:0005020,6.49e-44,6;CL:0002138,6.49e-44,6;CL:0005022,6.49e-44,6;CL:0002543,2.84e-42,6;CL:1000413,2.79e-38,9;CL:0002618,3.76e-22,3;CL:0000222,4.40e-20,121;CL:0002544,1.15e-19,6;CL:0000076,1.49e-19,63;CL:0002321,1.18e-07,250;CL:0000066,1.30e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;1.30e-74;18!CL:0005022;8.99e-44;6!UBERON:0010226;2.55e-08;1!UBERON:0005062;4.46e-08;4!UBERON:0007284;4.46e-08;4 | |ontology_enrichment_development_v019=CL:0002546;1.30e-74;18!CL:0005022;8.99e-44;6!UBERON:0010226;2.55e-08;1!UBERON:0005062;4.46e-08;4!UBERON:0007284;4.46e-08;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;7.84e-09;1!DOID:4549;7.84e-09;1!DOID:5861;7.84e-09;1!DOID:6496;7.84e-09;1 | |ontology_enrichment_disease_v019=DOID:3371;7.84e-09;1!DOID:4549;7.84e-09;1!DOID:5861;7.84e-09;1!DOID:6496;7.84e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,7.01e-09,1;DOID:4549,7.01e-09,1;DOID:5861,7.01e-09,1;DOID:6496,7.01e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!3.65e-29!18;UBERON:0004638!3.65e-29!18;UBERON:0004852!3.65e-29!18;UBERON:0007023!4.64e-26!115;UBERON:0000487!5.98e-23!22;UBERON:0006914!1.32e-19!25;UBERON:0004111!6.74e-16!241;UBERON:0003915!2.43e-15!9;UBERON:0004700!2.43e-15!9;UBERON:0001917!2.43e-15!9;UBERON:0000055!5.28e-15!69;UBERON:0000477!5.42e-15!286;UBERON:0000025!1.05e-13!194;UBERON:0002049!3.87e-12!79;UBERON:0007798!3.87e-12!79;UBERON:0004872!1.49e-11!84;UBERON:0001009!4.37e-11!113;UBERON:0002465!2.02e-10!10;UBERON:0001473!2.04e-10!8;UBERON:0004536!2.04e-10!8;UBERON:0006558!2.04e-10!8;UBERON:0004535!7.34e-10!110;UBERON:0001981!1.41e-09!60;UBERON:0007500!1.41e-09!60;UBERON:0004537!1.41e-09!60;UBERON:0006965!1.41e-09!60;UBERON:0001638!7.84e-09!9;UBERON:0003920!7.84e-09!9;UBERON:0004582!7.84e-09!9;UBERON:0003914!3.49e-08!118;UBERON:0000483!1.33e-07!309;UBERON:0004151!1.90e-07!3;UBERON:0000119!2.11e-07!312;UBERON:0003978!3.72e-07!3;UBERON:0009751!3.72e-07!3;UBERON:0000946!3.72e-07!3;UBERON:0002523!3.72e-07!3;UBERON:0005983!3.72e-07!3;UBERON:0002165!3.72e-07!3;UBERON:0002062!3.72e-07!3;UBERON:0007280!3.72e-07!3 | |ontology_enrichment_uberon=UBERON:0001986!3.65e-29!18;UBERON:0004638!3.65e-29!18;UBERON:0004852!3.65e-29!18;UBERON:0007023!4.64e-26!115;UBERON:0000487!5.98e-23!22;UBERON:0006914!1.32e-19!25;UBERON:0004111!6.74e-16!241;UBERON:0003915!2.43e-15!9;UBERON:0004700!2.43e-15!9;UBERON:0001917!2.43e-15!9;UBERON:0000055!5.28e-15!69;UBERON:0000477!5.42e-15!286;UBERON:0000025!1.05e-13!194;UBERON:0002049!3.87e-12!79;UBERON:0007798!3.87e-12!79;UBERON:0004872!1.49e-11!84;UBERON:0001009!4.37e-11!113;UBERON:0002465!2.02e-10!10;UBERON:0001473!2.04e-10!8;UBERON:0004536!2.04e-10!8;UBERON:0006558!2.04e-10!8;UBERON:0004535!7.34e-10!110;UBERON:0001981!1.41e-09!60;UBERON:0007500!1.41e-09!60;UBERON:0004537!1.41e-09!60;UBERON:0006965!1.41e-09!60;UBERON:0001638!7.84e-09!9;UBERON:0003920!7.84e-09!9;UBERON:0004582!7.84e-09!9;UBERON:0003914!3.49e-08!118;UBERON:0000483!1.33e-07!309;UBERON:0004151!1.90e-07!3;UBERON:0000119!2.11e-07!312;UBERON:0003978!3.72e-07!3;UBERON:0009751!3.72e-07!3;UBERON:0000946!3.72e-07!3;UBERON:0002523!3.72e-07!3;UBERON:0005983!3.72e-07!3;UBERON:0002165!3.72e-07!3;UBERON:0002062!3.72e-07!3;UBERON:0007280!3.72e-07!3 | ||
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| ||
|short_description=p10@PTPRB | |short_description=p10@PTPRB | ||
}} | }} |
Latest revision as of 16:04, 24 September 2015
Short description: | p10@PTPRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PTPRB_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 0bp_to_ENST00000334414, ENST00000552253, NM_001109754_5end |
EntrezGene: | PTPRB |
HGNC: | 9665 |
UniProt: | P23467Q86VA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.00e-116 | 24 |
endothelial cell | 3.06e-76 | 36 |
blood vessel endothelial cell | 6.88e-75 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.88e-75 | 18 |
meso-epithelial cell | 2.82e-60 | 45 |
lining cell | 5.96e-46 | 58 |
barrier cell | 5.96e-46 | 58 |
lymphangioblast | 6.49e-44 | 6 |
endothelial cell of lymphatic vessel | 6.49e-44 | 6 |
vascular lymphangioblast | 6.49e-44 | 6 |
vein endothelial cell | 2.84e-42 | 6 |
endothelial cell of artery | 2.79e-38 | 9 |
endothelial cell of umbilical vein | 3.76e-22 | 3 |
mesodermal cell | 4.40e-20 | 121 |
aortic endothelial cell | 1.15e-19 | 6 |
squamous epithelial cell | 1.49e-19 | 63 |
embryonic cell | 1.18e-07 | 250 |
epithelial cell | 1.30e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.01e-09 | 1 |
extraosseous chondrosarcoma | 7.01e-09 | 1 |
myxoid chondrosarcoma | 7.01e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 7.01e-09 | 1 |