FFCP PHASE1:Hg19::chr22:39096661..39096681,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9929 | |EntrezGene=9929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28953 | |HGNC=28953 | ||
|TSSclassifier=strong | |||
|UniProt=Q15040 | |UniProt=Q15040 | ||
|association_with_transcript=0bp_to_ENST00000216039_5end | |association_with_transcript=0bp_to_ENST00000216039_5end | ||
|cluster_id=chr22:39096661..39096681,- | |||
|coexpression_cluster_id=C3832 | |||
|description=CAGE_peak_2_at_JOSD1_5end | |description=CAGE_peak_2_at_JOSD1_5end | ||
|id=chr22:39096661..39096681,- | |id=chr22:39096661..39096681,- | ||
|ontology_enrichment_celltype=CL:0000766!2.22e-22!76;CL:0002057!1.84e-21!42;CL:0000860!3.72e-21!45;CL:0000557!1.31e-19!71;CL:0002009!1.05e-17!65;CL:0000012!2.49e-17!682;CL:0000548!1.44e-16!679;CL:0000004!1.44e-16!679;CL:0000255!1.44e-16!679;CL:0002194!1.48e-16!63;CL:0000576!1.48e-16!63;CL:0000040!1.48e-16!63;CL:0000559!1.48e-16!63;CL:0000839!1.87e-16!70;CL:0000063!2.25e-15!578;CL:0002371!8.03e-13!591;CL:0000763!7.68e-12!112;CL:0000049!7.68e-12!112;CL:0000144!1.29e-11!625;CL:0000738!3.94e-10!140;CL:0000213!5.50e-10!57;CL:0000215!5.50e-10!57;CL:0002078!1.11e-09!44;CL:0000115!4.73e-09!35;CL:0002139!6.50e-09!24;CL:0000003!6.63e-09!722;CL:0000222!5.22e-08!119;CL:0000071!1.48e-07!18;CL:0002546!1.48e-07!18;CL:0000066!3.33e-07!254 | |ontology_enrichment_celltype=CL:0000766!2.22e-22!76;CL:0002057!1.84e-21!42;CL:0000860!3.72e-21!45;CL:0000557!1.31e-19!71;CL:0002009!1.05e-17!65;CL:0000012!2.49e-17!682;CL:0000548!1.44e-16!679;CL:0000004!1.44e-16!679;CL:0000255!1.44e-16!679;CL:0002194!1.48e-16!63;CL:0000576!1.48e-16!63;CL:0000040!1.48e-16!63;CL:0000559!1.48e-16!63;CL:0000839!1.87e-16!70;CL:0000063!2.25e-15!578;CL:0002371!8.03e-13!591;CL:0000763!7.68e-12!112;CL:0000049!7.68e-12!112;CL:0000144!1.29e-11!625;CL:0000738!3.94e-10!140;CL:0000213!5.50e-10!57;CL:0000215!5.50e-10!57;CL:0002078!1.11e-09!44;CL:0000115!4.73e-09!35;CL:0002139!6.50e-09!24;CL:0000003!6.63e-09!722;CL:0000222!5.22e-08!119;CL:0000071!1.48e-07!18;CL:0002546!1.48e-07!18;CL:0000066!3.33e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-18;33!CL:0002057;2.21e-18;33!CL:0000473;2.09e-15;39!CL:0000234;2.09e-15;39!CL:0000766;1.96e-10;69!CL:0000576;3.46e-10;48!CL:0002139;5.05e-09;24!CL:0000115;4.49e-08;36!CL:0000071;1.39e-07;18!CL:0002078;4.89e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.68e-22,72;CL:0000860,1.83e-21,42;CL:0002057,1.83e-21,42;CL:0000473,1.92e-21,48;CL:0000234,1.92e-21,48;CL:0000557,1.67e-19,67;CL:0002009,1.33e-17,61;CL:0002194,1.94e-16,59;CL:0000576,1.94e-16,59;CL:0000040,1.94e-16,59;CL:0000559,1.94e-16,59;CL:0000839,2.75e-16,66;CL:0000763,1.68e-11,108;CL:0000049,1.68e-11,108;CL:0000213,2.35e-10,58;CL:0000215,2.35e-10,58;CL:0002078,4.88e-10,45;CL:0000738,6.45e-10,136;CL:0000115,2.05e-09,36;CL:0002139,6.48e-09,24;CL:0000222,2.87e-08,121;CL:0000071,1.48e-07,18;CL:0002546,1.48e-07,18;CL:0000066,3.37e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;6.86e-16;42!CL:0002546;1.39e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.81e-19!216;UBERON:0001474!2.28e-17!86;UBERON:0002371!2.88e-17!80;UBERON:0004765!2.89e-15!101;UBERON:0001434!2.89e-15!101;UBERON:0002193!2.75e-12!112;UBERON:0002405!5.09e-12!115;UBERON:0002204!9.63e-12!167;UBERON:0000926!1.47e-11!448;UBERON:0004120!1.47e-11!448;UBERON:0006603!1.47e-11!448;UBERON:0002390!2.11e-11!102;UBERON:0003061!2.11e-11!102;UBERON:0000055!1.36e-08!69;UBERON:0002049!1.49e-08!79;UBERON:0007798!1.49e-08!79;UBERON:0001986!1.48e-07!18;UBERON:0004638!1.48e-07!18;UBERON:0004852!1.48e-07!18;UBERON:0001981!3.68e-07!60;UBERON:0007500!3.68e-07!60;UBERON:0004537!3.68e-07!60;UBERON:0006965!3.68e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.39e-07;18!UBERON:0001986;1.39e-07;18!UBERON:0004852;1.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.27e-18,203;UBERON:0001474,3.88e-17,82;UBERON:0002371,4.65e-17,76;UBERON:0004765,1.56e-16,90;UBERON:0001434,7.26e-15,100;UBERON:0002405,1.11e-14,93;UBERON:0002193,6.22e-12,108;UBERON:0002204,2.04e-11,167;UBERON:0002390,4.67e-11,98;UBERON:0003061,4.67e-11,98;UBERON:0000926,4.08e-09,315;UBERON:0004120,4.08e-09,315;UBERON:0006603,4.08e-09,315;UBERON:0000055,1.74e-08,68;UBERON:0002049,1.92e-08,78;UBERON:0007798,1.92e-08,78;UBERON:0004638,1.48e-07,18;UBERON:0001986,1.48e-07,18;UBERON:0004852,1.48e-07,18;UBERON:0007500,4.69e-07,59;UBERON:0001981,4.69e-07,59;UBERON:0004537,4.69e-07,59;UBERON:0006965,4.69e-07,59 | |||
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| ||
|short_description=p2@JOSD1 | |short_description=p2@JOSD1 | ||
}} | }} |
Latest revision as of 16:16, 24 September 2015
Short description: | p2@JOSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JOSD1_5end |
Coexpression cluster: | C3832_CD14_Eosinophils_Basophils_Neutrophils_immature_Mast_migratory |
Association with transcript: | 0bp_to_ENST00000216039_5end |
EntrezGene: | JOSD1 |
HGNC: | 28953 |
UniProt: | Q15040 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.68e-22 | 72 |
classical monocyte | 1.83e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-21 | 42 |
defensive cell | 1.92e-21 | 48 |
phagocyte | 1.92e-21 | 48 |
granulocyte monocyte progenitor cell | 1.67e-19 | 67 |
macrophage dendritic cell progenitor | 1.33e-17 | 61 |
monopoietic cell | 1.94e-16 | 59 |
monocyte | 1.94e-16 | 59 |
monoblast | 1.94e-16 | 59 |
promonocyte | 1.94e-16 | 59 |
myeloid lineage restricted progenitor cell | 2.75e-16 | 66 |
myeloid cell | 1.68e-11 | 108 |
common myeloid progenitor | 1.68e-11 | 108 |
lining cell | 2.35e-10 | 58 |
barrier cell | 2.35e-10 | 58 |
meso-epithelial cell | 4.88e-10 | 45 |
leukocyte | 6.45e-10 | 136 |
endothelial cell | 2.05e-09 | 36 |
endothelial cell of vascular tree | 6.48e-09 | 24 |
mesodermal cell | 2.87e-08 | 121 |
blood vessel endothelial cell | 1.48e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.48e-07 | 18 |
epithelial cell | 3.37e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.27e-18 | 203 |
bone element | 3.88e-17 | 82 |
bone marrow | 4.65e-17 | 76 |
skeletal element | 1.56e-16 | 90 |
skeletal system | 7.26e-15 | 100 |
immune system | 1.11e-14 | 93 |
hemolymphoid system | 6.22e-12 | 108 |
musculoskeletal system | 2.04e-11 | 167 |
hematopoietic system | 4.67e-11 | 98 |
blood island | 4.67e-11 | 98 |
mesoderm | 4.08e-09 | 315 |
mesoderm-derived structure | 4.08e-09 | 315 |
presumptive mesoderm | 4.08e-09 | 315 |
vessel | 1.74e-08 | 68 |
vasculature | 1.92e-08 | 78 |
vascular system | 1.92e-08 | 78 |
blood vessel endothelium | 1.48e-07 | 18 |
endothelium | 1.48e-07 | 18 |
cardiovascular system endothelium | 1.48e-07 | 18 |
epithelial tube open at both ends | 4.69e-07 | 59 |
blood vessel | 4.69e-07 | 59 |
blood vasculature | 4.69e-07 | 59 |
vascular cord | 4.69e-07 | 59 |