FFCP PHASE1:Hg19::chr12:71148381..71148405,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5801 | |EntrezGene=5801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9680 | |HGNC=9680 | ||
|TSSclassifier=strong | |||
|UniProt=Q15256,Q7Z2V8 | |UniProt=Q15256,Q7Z2V8 | ||
|association_with_transcript=0bp_to_NM_130846_5end | |association_with_transcript=0bp_to_NM_130846_5end | ||
|cluster_id=chr12:71148381..71148405,- | |||
|coexpression_cluster_id=C1684 | |coexpression_cluster_id=C1684 | ||
|description=CAGE_peak_3_at_PTPRR_5end | |description=CAGE_peak_3_at_PTPRR_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.33e-15;3!CL:0000159;1.31e-10;2 | |ontology_enrichment_celltype_v019=CL:0002541;2.33e-15;3!CL:0000159;1.31e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.45e-15,3;CL:0000159,1.19e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.08e-07;10 | |ontology_enrichment_development_v019=UBERON:0005795;1.08e-07;10 | ||
|ontology_enrichment_disease=DOID:305!1.44e-09!106;DOID:299!8.95e-09!25;DOID:1749!2.60e-07!14 | |ontology_enrichment_disease=DOID:305!1.44e-09!106;DOID:299!8.95e-09!25;DOID:1749!2.60e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:299;3.13e-08;25 | |ontology_enrichment_disease_v019=DOID:299;3.13e-08;25 | ||
|ontology_enrichment_disease_v019_2=DOID:299,2.97e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.81e-24!115;UBERON:0001049!8.56e-20!57;UBERON:0005068!8.56e-20!57;UBERON:0006241!8.56e-20!57;UBERON:0007135!8.56e-20!57;UBERON:0002780!2.14e-16!41;UBERON:0001890!2.14e-16!41;UBERON:0006240!2.14e-16!41;UBERON:0002616!5.69e-16!59;UBERON:0003080!7.65e-16!42;UBERON:0000955!2.35e-14!69;UBERON:0006238!2.35e-14!69;UBERON:0002020!9.47e-14!34;UBERON:0003528!9.47e-14!34;UBERON:0001017!1.17e-13!82;UBERON:0001869!1.17e-13!32;UBERON:0005743!1.38e-12!86;UBERON:0001893!1.48e-12!34;UBERON:0002619!1.04e-11!22;UBERON:0002791!1.25e-11!33;UBERON:0000073!2.47e-11!94;UBERON:0001016!2.47e-11!94;UBERON:0001950!3.16e-11!20;UBERON:0003075!6.10e-11!86;UBERON:0007284!6.10e-11!86;UBERON:0002346!4.56e-10!90;UBERON:0000956!6.68e-10!25;UBERON:0000203!6.68e-10!25;UBERON:0003056!7.21e-09!61;UBERON:0000062!2.71e-08!511;UBERON:0005409!1.96e-07!35;UBERON:0003296!6.02e-07!4;UBERON:0010133!6.02e-07!4;UBERON:0001046!6.80e-07!19;UBERON:0000481!7.73e-07!347 | |ontology_enrichment_uberon=UBERON:0007023!2.81e-24!115;UBERON:0001049!8.56e-20!57;UBERON:0005068!8.56e-20!57;UBERON:0006241!8.56e-20!57;UBERON:0007135!8.56e-20!57;UBERON:0002780!2.14e-16!41;UBERON:0001890!2.14e-16!41;UBERON:0006240!2.14e-16!41;UBERON:0002616!5.69e-16!59;UBERON:0003080!7.65e-16!42;UBERON:0000955!2.35e-14!69;UBERON:0006238!2.35e-14!69;UBERON:0002020!9.47e-14!34;UBERON:0003528!9.47e-14!34;UBERON:0001017!1.17e-13!82;UBERON:0001869!1.17e-13!32;UBERON:0005743!1.38e-12!86;UBERON:0001893!1.48e-12!34;UBERON:0002619!1.04e-11!22;UBERON:0002791!1.25e-11!33;UBERON:0000073!2.47e-11!94;UBERON:0001016!2.47e-11!94;UBERON:0001950!3.16e-11!20;UBERON:0003075!6.10e-11!86;UBERON:0007284!6.10e-11!86;UBERON:0002346!4.56e-10!90;UBERON:0000956!6.68e-10!25;UBERON:0000203!6.68e-10!25;UBERON:0003056!7.21e-09!61;UBERON:0000062!2.71e-08!511;UBERON:0005409!1.96e-07!35;UBERON:0003296!6.02e-07!4;UBERON:0010133!6.02e-07!4;UBERON:0001046!6.80e-07!19;UBERON:0000481!7.73e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.66e-18;22!UBERON:0000160;1.77e-15;17!UBERON:0003124;2.33e-15;3!UBERON:0000920;2.33e-15;3!UBERON:0000059;1.76e-10;11!UBERON:0004921;4.32e-10;33!UBERON:0001255;7.00e-10;2!UBERON:0001556;7.00e-10;2!UBERON:0001905;1.21e-09;2!UBERON:0002757;1.21e-09;2!UBERON:0010134;1.21e-09;2!UBERON:0005408;1.21e-09;2!UBERON:0001899;1.21e-09;2!UBERON:0001155;2.25e-08;9 | |ontology_enrichment_uberon_v019=UBERON:0005409;2.66e-18;22!UBERON:0000160;1.77e-15;17!UBERON:0003124;2.33e-15;3!UBERON:0000920;2.33e-15;3!UBERON:0000059;1.76e-10;11!UBERON:0004921;4.32e-10;33!UBERON:0001255;7.00e-10;2!UBERON:0001556;7.00e-10;2!UBERON:0001905;1.21e-09;2!UBERON:0002757;1.21e-09;2!UBERON:0010134;1.21e-09;2!UBERON:0005408;1.21e-09;2!UBERON:0001899;1.21e-09;2!UBERON:0001155;2.25e-08;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.24e-16,25;UBERON:0000160,1.24e-15,17;UBERON:0000920,2.45e-15,3;UBERON:0003124,5.29e-11,7;UBERON:0000059,1.33e-10,11;UBERON:0001255,5.33e-10,2;UBERON:0001556,5.33e-10,2;UBERON:0001905,1.89e-09,2;UBERON:0002757,1.89e-09,2;UBERON:0010134,1.89e-09,2;UBERON:0005408,1.89e-09,2;UBERON:0001899,1.89e-09,2;UBERON:0001155,1.71e-08,9;UBERON:0004921,2.41e-07,118;UBERON:0011216,8.16e-07,223 | |||
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|short_description=p3@PTPRR | |short_description=p3@PTPRR | ||
}} | }} |
Latest revision as of 16:17, 24 September 2015
Short description: | p3@PTPRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPRR_5end |
Coexpression cluster: | C1684_serous_gall_rectal_colon_chorionic_adult_non |
Association with transcript: | 0bp_to_NM_130846_5end |
EntrezGene: | PTPRR |
HGNC: | 9680 |
UniProt: | Q15256Q7Z2V8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.45e-15 | 3 |
seromucus secreting cell | 1.19e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.24e-16 | 25 |
intestine | 1.24e-15 | 17 |
egg chorion | 2.45e-15 | 3 |
chorion | 5.29e-11 | 7 |
large intestine | 1.33e-10 | 11 |
urinary bladder | 5.33e-10 | 2 |
lower urinary tract | 5.33e-10 | 2 |
pineal body | 1.89e-09 | 2 |
regional part of epithalamus | 1.89e-09 | 2 |
secretory circumventricular organ | 1.89e-09 | 2 |
circumventricular organ | 1.89e-09 | 2 |
epithalamus | 1.89e-09 | 2 |
colon | 1.71e-08 | 9 |
subdivision of digestive tract | 2.41e-07 | 118 |
organ system subdivision | 8.16e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.97e-08 | 25 |