FFCP PHASE1:Hg19::chr20:20065997..20066011,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26074 | |EntrezGene=26074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15872 | |HGNC=15872 | ||
|TSSclassifier=strong | |||
|UniProt=C9JA66 | |UniProt=C9JA66 | ||
|association_with_transcript=-94bp_to_ENST00000377297,ENST00000442372_5end | |association_with_transcript=-94bp_to_ENST00000377297,ENST00000442372_5end | ||
|cluster_id=chr20:20065997..20066011,+ | |||
|coexpression_cluster_id=C2608 | |coexpression_cluster_id=C2608 | ||
|description=CAGE_peak_7_at_C20orf26_5end | |description=CAGE_peak_7_at_C20orf26_5end | ||
|id=chr20:20065997..20066011,+ | |id=chr20:20065997..20066011,+ | ||
|ontology_enrichment_celltype=CL:0000148!9.76e-07!10;CL:0000541!9.76e-07!10 | |ontology_enrichment_celltype=CL:0000148!9.76e-07!10;CL:0000541!9.76e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;3.85e-23;10!CL:0002567;5.36e-20;3!CL:0000147;1.23e-16;14!CL:0002566;6.44e-16;1!CL:0000710;9.68e-12;20!CL:0000075;9.21e-09;27!CL:0002077;5.54e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.45e-23,10;CL:0000541,4.45e-23,10;CL:0002567,7.88e-20,3;CL:0000147,1.36e-16,14;CL:0002566,6.44e-16,1;CL:0000710,1.04e-11,20;CL:0000075,9.70e-09,27;CL:0002077,5.54e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.92e-15;1!UBERON:0008814;2.23e-08;2!UBERON:0010056;2.23e-08;2 | |||
|ontology_enrichment_disease=DOID:114!2.18e-09!2;DOID:1909!1.01e-08!2 | |ontology_enrichment_disease=DOID:114!2.18e-09!2;DOID:1909!1.01e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:114;1.33e-29;2!DOID:178;1.92e-15;1!DOID:326;1.92e-15;1!DOID:3978;1.92e-15;1!DOID:3394;1.92e-15;1!DOID:5844;1.92e-15;1!DOID:1287;2.47e-15;4!DOID:1909;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.31e-30,2;DOID:178,1.34e-15,1;DOID:326,1.34e-15,1;DOID:3978,1.34e-15,1;DOID:3394,1.34e-15,1;DOID:5844,1.34e-15,1;DOID:1287,2.07e-15,4;DOID:1909,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.68e-24!115;UBERON:0001049!4.10e-14!57;UBERON:0005068!4.10e-14!57;UBERON:0006241!4.10e-14!57;UBERON:0007135!4.10e-14!57;UBERON:0006331!8.34e-12!3;UBERON:0002616!1.10e-11!59;UBERON:0002346!2.56e-11!90;UBERON:0002298!3.59e-11!8;UBERON:0000924!1.07e-10!173;UBERON:0006601!1.07e-10!173;UBERON:0003075!1.12e-10!86;UBERON:0007284!1.12e-10!86;UBERON:0005743!1.95e-10!86;UBERON:0000073!2.92e-10!94;UBERON:0001016!2.92e-10!94;UBERON:0002308!3.94e-10!9;UBERON:0000125!3.94e-10!9;UBERON:0004121!4.17e-10!169;UBERON:0001017!8.53e-10!82;UBERON:0000955!2.49e-09!69;UBERON:0006238!2.49e-09!69;UBERON:0000341!6.59e-09!2;UBERON:0002780!2.50e-08!41;UBERON:0001890!2.50e-08!41;UBERON:0006240!2.50e-08!41;UBERON:0000153!2.87e-08!129;UBERON:0007811!2.87e-08!129;UBERON:0003076!3.28e-08!15;UBERON:0003057!3.28e-08!15;UBERON:0002148!3.38e-08!2;UBERON:0009662!3.38e-08!2;UBERON:0003080!4.38e-08!42;UBERON:0004733!3.36e-07!12;UBERON:0002028!3.36e-07!12;UBERON:0007277!3.36e-07!12;UBERON:0000033!5.98e-07!123;UBERON:0002020!7.32e-07!34;UBERON:0003528!7.32e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!9.68e-24!115;UBERON:0001049!4.10e-14!57;UBERON:0005068!4.10e-14!57;UBERON:0006241!4.10e-14!57;UBERON:0007135!4.10e-14!57;UBERON:0006331!8.34e-12!3;UBERON:0002616!1.10e-11!59;UBERON:0002346!2.56e-11!90;UBERON:0002298!3.59e-11!8;UBERON:0000924!1.07e-10!173;UBERON:0006601!1.07e-10!173;UBERON:0003075!1.12e-10!86;UBERON:0007284!1.12e-10!86;UBERON:0005743!1.95e-10!86;UBERON:0000073!2.92e-10!94;UBERON:0001016!2.92e-10!94;UBERON:0002308!3.94e-10!9;UBERON:0000125!3.94e-10!9;UBERON:0004121!4.17e-10!169;UBERON:0001017!8.53e-10!82;UBERON:0000955!2.49e-09!69;UBERON:0006238!2.49e-09!69;UBERON:0000341!6.59e-09!2;UBERON:0002780!2.50e-08!41;UBERON:0001890!2.50e-08!41;UBERON:0006240!2.50e-08!41;UBERON:0000153!2.87e-08!129;UBERON:0007811!2.87e-08!129;UBERON:0003076!3.28e-08!15;UBERON:0003057!3.28e-08!15;UBERON:0002148!3.38e-08!2;UBERON:0009662!3.38e-08!2;UBERON:0003080!4.38e-08!42;UBERON:0004733!3.36e-07!12;UBERON:0002028!3.36e-07!12;UBERON:0007277!3.36e-07!12;UBERON:0000033!5.98e-07!123;UBERON:0002020!7.32e-07!34;UBERON:0003528!7.32e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.92e-15;1!UBERON:0002146;1.92e-15;1!UBERON:0002082;1.92e-15;1!UBERON:0005623;1.92e-15;1!UBERON:0007100;3.33e-14;25!UBERON:0000341;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,9.99e-16,1;UBERON:0002082,9.99e-16,1;UBERON:0010226,9.99e-16,1;UBERON:0002146,1.16e-15,1;UBERON:0005623,1.16e-15,1;UBERON:0007100,2.89e-13,27;UBERON:0003103,8.38e-10,68;UBERON:0000341,2.15e-08,2;UBERON:0007023,2.72e-07,114 | |||
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| ||
|short_description=p7@C20orf26 | |short_description=p7@C20orf26 | ||
}} | }} |
Latest revision as of 16:58, 24 September 2015
Short description: | p7@C20orf26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_C20orf26_5end |
Coexpression cluster: | C2608_Melanocyte_heart_skeletal_melanoma_left_umbilical_carcinoid |
Association with transcript: | -94bp_to_ENST00000377297, ENST00000442372_5end |
EntrezGene: | C20orf26 |
HGNC: | 15872 |
UniProt: | C9JA66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.45e-23 | 10 |
melanoblast | 4.45e-23 | 10 |
light melanocyte | 7.88e-20 | 3 |
pigment cell | 1.36e-16 | 14 |
dark melanocyte | 6.44e-16 | 1 |
neurecto-epithelial cell | 1.04e-11 | 20 |
columnar/cuboidal epithelial cell | 9.70e-09 | 27 |
ecto-epithelial cell | 5.54e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 9.99e-16 | 1 |
cardiac ventricle | 9.99e-16 | 1 |
future cardiac ventricle | 9.99e-16 | 1 |
pulmonary valve | 1.16e-15 | 1 |
semi-lunar valve | 1.16e-15 | 1 |
primary circulatory organ | 2.89e-13 | 27 |
compound organ | 8.38e-10 | 68 |
throat | 2.15e-08 | 2 |
adult organism | 2.72e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.31e-30 | 2 |
vascular disease | 1.34e-15 | 1 |
ischemia | 1.34e-15 | 1 |
extrinsic cardiomyopathy | 1.34e-15 | 1 |
myocardial ischemia | 1.34e-15 | 1 |
myocardial infarction | 1.34e-15 | 1 |
cardiovascular system disease | 2.07e-15 | 4 |
melanoma | 3.08e-08 | 2 |