FFCP PHASE1:Hg19::chr2:219246930..219246965,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6556 | |EntrezGene=6556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10907 | |HGNC=10907 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000486451_5end | |association_with_transcript=4bp_to_ENST00000486451_5end | ||
|cluster_id=chr2:219246930..219246965,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_SLC11A1_5end | |description=CAGE_peak_2_at_SLC11A1_5end | ||
|id=chr2:219246930..219246965,+ | |id=chr2:219246930..219246965,+ | ||
|ontology_enrichment_celltype=CL:0000766!5.33e-48!76;CL:0002057!5.48e-45!42;CL:0002194!1.44e-44!63;CL:0000576!1.44e-44!63;CL:0000040!1.44e-44!63;CL:0000559!1.44e-44!63;CL:0002009!1.71e-42!65;CL:0000860!1.05e-40!45;CL:0000557!2.36e-38!71;CL:0000839!7.71e-38!70;CL:0000738!3.52e-34!140;CL:0002087!1.00e-30!119;CL:0000763!7.50e-28!112;CL:0000049!7.50e-28!112;CL:0002031!5.41e-25!124;CL:0000037!6.65e-25!172;CL:0000566!6.65e-25!172;CL:0002032!4.41e-22!165;CL:0000837!4.41e-22!165;CL:0000988!6.87e-22!182;CL:0002393!7.36e-10!9;CL:0002397!7.36e-10!9;CL:0000094!7.54e-10!8 | |ontology_enrichment_celltype=CL:0000766!5.33e-48!76;CL:0002057!5.48e-45!42;CL:0002194!1.44e-44!63;CL:0000576!1.44e-44!63;CL:0000040!1.44e-44!63;CL:0000559!1.44e-44!63;CL:0002009!1.71e-42!65;CL:0000860!1.05e-40!45;CL:0000557!2.36e-38!71;CL:0000839!7.71e-38!70;CL:0000738!3.52e-34!140;CL:0002087!1.00e-30!119;CL:0000763!7.50e-28!112;CL:0000049!7.50e-28!112;CL:0002031!5.41e-25!124;CL:0000037!6.65e-25!172;CL:0000566!6.65e-25!172;CL:0002032!4.41e-22!165;CL:0000837!4.41e-22!165;CL:0000988!6.87e-22!182;CL:0002393!7.36e-10!9;CL:0002397!7.36e-10!9;CL:0000094!7.54e-10!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.44e-39;33!CL:0002057;2.44e-39;33!CL:0000473;3.68e-38;39!CL:0000234;3.68e-38;39!CL:0000576;5.09e-33;48!CL:0000766;4.60e-26;69!CL:0000094;1.80e-11;8!CL:0002087;1.85e-11;104!CL:0000763;2.77e-11;100!CL:0000738;6.67e-09;136!CL:0002393;2.65e-08;6!CL:0002397;2.65e-08;6!CL:0000081;9.93e-08;11!CL:0000235;1.14e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.67e-60,48;CL:0000234,5.67e-60,48;CL:0000766,1.41e-58,72;CL:0002194,3.51e-54,59;CL:0000576,3.51e-54,59;CL:0000040,3.51e-54,59;CL:0000559,3.51e-54,59;CL:0000860,1.58e-53,42;CL:0002057,1.58e-53,42;CL:0002009,9.39e-52,61;CL:0000557,6.04e-47,67;CL:0000839,2.47e-46,66;CL:0000738,5.80e-38,136;CL:0002087,4.75e-34,115;CL:0000763,1.18e-32,108;CL:0000049,1.18e-32,108;CL:0002031,7.24e-28,120;CL:0000037,1.32e-26,168;CL:0002032,5.70e-24,161;CL:0000837,5.70e-24,161;CL:0000988,5.73e-24,177;CL:0002393,1.77e-11,9;CL:0002397,1.77e-11,9;CL:0000094,1.83e-11,8;CL:0000081,1.00e-07,11;CL:0000235,1.15e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.10e-38;42!CL:0000049;8.47e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-54!115;UBERON:0002390!1.60e-41!102;UBERON:0003061!1.60e-41!102;UBERON:0002193!1.23e-37!112;UBERON:0002371!1.57e-32!80;UBERON:0001474!1.06e-28!86;UBERON:0001049!3.28e-25!57;UBERON:0005068!3.28e-25!57;UBERON:0006241!3.28e-25!57;UBERON:0007135!3.28e-25!57;UBERON:0002405!9.76e-25!115;UBERON:0004765!3.67e-22!101;UBERON:0001434!3.67e-22!101;UBERON:0002616!5.39e-20!59;UBERON:0003080!1.44e-19!42;UBERON:0002780!3.59e-19!41;UBERON:0001890!3.59e-19!41;UBERON:0006240!3.59e-19!41;UBERON:0003075!7.84e-17!86;UBERON:0007284!7.84e-17!86;UBERON:0001017!8.86e-16!82;UBERON:0000955!1.41e-15!69;UBERON:0006238!1.41e-15!69;UBERON:0002346!2.42e-15!90;UBERON:0002020!3.72e-15!34;UBERON:0003528!3.72e-15!34;UBERON:0005743!5.08e-15!86;UBERON:0001893!6.81e-15!34;UBERON:0002791!2.16e-14!33;UBERON:0003081!8.50e-14!216;UBERON:0001869!1.65e-13!32;UBERON:0000073!7.83e-13!94;UBERON:0001016!7.83e-13!94;UBERON:0002619!2.23e-11!22;UBERON:0003056!2.50e-11!61;UBERON:0001950!5.50e-10!20;UBERON:0000062!7.86e-10!511;UBERON:0000956!2.31e-09!25;UBERON:0000203!2.31e-09!25;UBERON:0000178!3.48e-09!15;UBERON:0000179!3.48e-09!15;UBERON:0000463!3.48e-09!15;UBERON:0000479!5.00e-08!787;UBERON:0002308!7.91e-08!9;UBERON:0000125!7.91e-08!9;UBERON:0002420!1.00e-07!9;UBERON:0007245!1.00e-07!9;UBERON:0010009!1.00e-07!9;UBERON:0010011!1.00e-07!9;UBERON:0000454!1.00e-07!9;UBERON:0002204!1.02e-07!167;UBERON:0002298!3.33e-07!8;UBERON:0003076!7.38e-07!15;UBERON:0003057!7.38e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.51e-54!115;UBERON:0002390!1.60e-41!102;UBERON:0003061!1.60e-41!102;UBERON:0002193!1.23e-37!112;UBERON:0002371!1.57e-32!80;UBERON:0001474!1.06e-28!86;UBERON:0001049!3.28e-25!57;UBERON:0005068!3.28e-25!57;UBERON:0006241!3.28e-25!57;UBERON:0007135!3.28e-25!57;UBERON:0002405!9.76e-25!115;UBERON:0004765!3.67e-22!101;UBERON:0001434!3.67e-22!101;UBERON:0002616!5.39e-20!59;UBERON:0003080!1.44e-19!42;UBERON:0002780!3.59e-19!41;UBERON:0001890!3.59e-19!41;UBERON:0006240!3.59e-19!41;UBERON:0003075!7.84e-17!86;UBERON:0007284!7.84e-17!86;UBERON:0001017!8.86e-16!82;UBERON:0000955!1.41e-15!69;UBERON:0006238!1.41e-15!69;UBERON:0002346!2.42e-15!90;UBERON:0002020!3.72e-15!34;UBERON:0003528!3.72e-15!34;UBERON:0005743!5.08e-15!86;UBERON:0001893!6.81e-15!34;UBERON:0002791!2.16e-14!33;UBERON:0003081!8.50e-14!216;UBERON:0001869!1.65e-13!32;UBERON:0000073!7.83e-13!94;UBERON:0001016!7.83e-13!94;UBERON:0002619!2.23e-11!22;UBERON:0003056!2.50e-11!61;UBERON:0001950!5.50e-10!20;UBERON:0000062!7.86e-10!511;UBERON:0000956!2.31e-09!25;UBERON:0000203!2.31e-09!25;UBERON:0000178!3.48e-09!15;UBERON:0000179!3.48e-09!15;UBERON:0000463!3.48e-09!15;UBERON:0000479!5.00e-08!787;UBERON:0002308!7.91e-08!9;UBERON:0000125!7.91e-08!9;UBERON:0002420!1.00e-07!9;UBERON:0007245!1.00e-07!9;UBERON:0010009!1.00e-07!9;UBERON:0010011!1.00e-07!9;UBERON:0000454!1.00e-07!9;UBERON:0002204!1.02e-07!167;UBERON:0002298!3.33e-07!8;UBERON:0003076!7.38e-07!15;UBERON:0003057!7.38e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.16e-11;53!UBERON:0002616;2.16e-11;53!UBERON:0000178;5.71e-11;15!UBERON:0000179;5.71e-11;15!UBERON:0000463;5.71e-11;15!UBERON:0002780;1.73e-10;41!UBERON:0001890;1.73e-10;41!UBERON:0007023;1.77e-10;114!UBERON:0003528;6.46e-10;34!UBERON:0002020;6.46e-10;34!UBERON:0001893;8.00e-10;34!UBERON:0002791;3.74e-09;32!UBERON:0001869;9.43e-09;32!UBERON:0002619;4.88e-08;22!UBERON:0000125;1.86e-07;9!UBERON:0002308;1.86e-07;9!UBERON:0002420;2.30e-07;9!UBERON:0007245;2.30e-07;9!UBERON:0010009;2.30e-07;9!UBERON:0010011;2.30e-07;9!UBERON:0000454;2.30e-07;9!UBERON:0002298;6.20e-07;6 | |||
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| ||
|short_description=p2@SLC11A1 | |short_description=p2@SLC11A1 | ||
}} | }} |
Latest revision as of 17:14, 24 September 2015
Short description: | p2@SLC11A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC11A1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 4bp_to_ENST00000486451_5end |
EntrezGene: | SLC11A1 |
HGNC: | 10907 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.67e-60 | 48 |
phagocyte | 5.67e-60 | 48 |
myeloid leukocyte | 1.41e-58 | 72 |
monopoietic cell | 3.51e-54 | 59 |
monocyte | 3.51e-54 | 59 |
monoblast | 3.51e-54 | 59 |
promonocyte | 3.51e-54 | 59 |
classical monocyte | 1.58e-53 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.58e-53 | 42 |
macrophage dendritic cell progenitor | 9.39e-52 | 61 |
granulocyte monocyte progenitor cell | 6.04e-47 | 67 |
myeloid lineage restricted progenitor cell | 2.47e-46 | 66 |
leukocyte | 5.80e-38 | 136 |
nongranular leukocyte | 4.75e-34 | 115 |
myeloid cell | 1.18e-32 | 108 |
common myeloid progenitor | 1.18e-32 | 108 |
hematopoietic lineage restricted progenitor cell | 7.24e-28 | 120 |
hematopoietic stem cell | 1.32e-26 | 168 |
hematopoietic oligopotent progenitor cell | 5.70e-24 | 161 |
hematopoietic multipotent progenitor cell | 5.70e-24 | 161 |
hematopoietic cell | 5.73e-24 | 177 |
intermediate monocyte | 1.77e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.77e-11 | 9 |
granulocyte | 1.83e-11 | 8 |
blood cell | 1.00e-07 | 11 |
macrophage | 1.15e-07 | 6 |