FFCP PHASE1:Hg19::chr2:219246988..219247016,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:219246988..219247016,+ to FFCP PHASE1:Hg19::chr2:219246988..219247016,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6556 | |EntrezGene=6556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10907 | |HGNC=10907 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000469799,ENST00000471875,ENST00000481524,ENST00000492413,ENST00000494322_5end | |||
|cluster_id=chr2:219246988..219247016,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_SLC11A1_5end | |||
|id=chr2:219246988..219247016,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.07e-46!76;CL:0002194!7.25e-44!63;CL:0000576!7.25e-44!63;CL:0000040!7.25e-44!63;CL:0000559!7.25e-44!63;CL:0002057!8.34e-42!42;CL:0002009!9.52e-42!65;CL:0000860!1.16e-37!45;CL:0000557!1.39e-37!71;CL:0000738!2.40e-37!140;CL:0000839!5.32e-37!70;CL:0002087!8.12e-34!119;CL:0000763!5.04e-28!112;CL:0000049!5.04e-28!112;CL:0002031!1.11e-27!124;CL:0000037!1.17e-27!172;CL:0000566!1.17e-27!172;CL:0002032!6.00e-25!165;CL:0000837!6.00e-25!165;CL:0000988!3.08e-24!182;CL:0002393!1.87e-09!9;CL:0002397!1.87e-09!9;CL:0000094!2.83e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.62e-35;33!CL:0002057;4.62e-35;33!CL:0000473;3.68e-34;39!CL:0000234;3.68e-34;39!CL:0000576;2.02e-29;48!CL:0000766;3.50e-23;69!CL:0002087;5.32e-11;104!CL:0000094;1.91e-10;8!CL:0000763;2.25e-10;100!CL:0000738;1.13e-09;136!CL:0002393;1.22e-07;6!CL:0002397;1.22e-07;6!CL:0000235;3.98e-07;6!CL:0000081;6.26e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.15e-55,72;CL:0000473,8.09e-54,48;CL:0000234,8.09e-54,48;CL:0002194,1.21e-51,59;CL:0000576,1.21e-51,59;CL:0000040,1.21e-51,59;CL:0000559,1.21e-51,59;CL:0002009,3.16e-49,61;CL:0000860,5.99e-48,42;CL:0002057,5.99e-48,42;CL:0000557,1.65e-44,67;CL:0000839,7.81e-44,66;CL:0000738,2.80e-39,136;CL:0002087,2.52e-36,115;CL:0000763,8.96e-32,108;CL:0000049,8.96e-32,108;CL:0002031,6.92e-30,120;CL:0000037,1.07e-28,168;CL:0002032,2.93e-26,161;CL:0000837,2.93e-26,161;CL:0000988,9.91e-26,177;CL:0002393,1.19e-10,9;CL:0002397,1.19e-10,9;CL:0000094,1.91e-10,8;CL:0000235,4.01e-07,6;CL:0000081,6.27e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-34;42!CL:0000049;1.17e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.02e-55!115;UBERON:0002390!2.35e-39!102;UBERON:0003061!2.35e-39!102;UBERON:0002193!2.59e-35!112;UBERON:0002371!1.58e-31!80;UBERON:0001474!1.21e-27!86;UBERON:0002405!5.54e-23!115;UBERON:0004765!1.31e-21!101;UBERON:0001434!1.31e-21!101;UBERON:0001049!2.42e-21!57;UBERON:0005068!2.42e-21!57;UBERON:0006241!2.42e-21!57;UBERON:0007135!2.42e-21!57;UBERON:0002616!1.10e-16!59;UBERON:0003080!1.53e-16!42;UBERON:0002780!4.60e-16!41;UBERON:0001890!4.60e-16!41;UBERON:0006240!4.60e-16!41;UBERON:0000955!3.27e-14!69;UBERON:0006238!3.27e-14!69;UBERON:0001017!5.01e-14!82;UBERON:0003075!1.17e-13!86;UBERON:0007284!1.17e-13!86;UBERON:0005743!2.27e-13!86;UBERON:0002020!1.09e-12!34;UBERON:0003528!1.09e-12!34;UBERON:0003081!2.14e-12!216;UBERON:0001893!2.23e-12!34;UBERON:0002346!2.50e-12!90;UBERON:0002791!5.00e-12!33;UBERON:0000073!2.59e-11!94;UBERON:0001016!2.59e-11!94;UBERON:0001869!3.27e-11!32;UBERON:0002619!1.86e-09!22;UBERON:0003056!3.34e-09!61;UBERON:0001950!2.80e-08!20;UBERON:0002204!2.89e-08!167;UBERON:0000178!3.51e-08!15;UBERON:0000179!3.51e-08!15;UBERON:0000463!3.51e-08!15;UBERON:0000479!5.14e-08!787;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0000062!1.33e-07!511;UBERON:0002308!4.28e-07!9;UBERON:0000125!4.28e-07!9;UBERON:0002420!4.32e-07!9;UBERON:0007245!4.32e-07!9;UBERON:0010009!4.32e-07!9;UBERON:0010011!4.32e-07!9;UBERON:0000454!4.32e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.19e-12;114!UBERON:0002780;8.68e-12;41!UBERON:0001890;8.68e-12;41!UBERON:0000073;4.81e-11;53!UBERON:0002616;4.81e-11;53!UBERON:0003528;1.48e-10;34!UBERON:0002020;1.48e-10;34!UBERON:0001893;2.14e-10;34!UBERON:0002791;4.84e-10;32!UBERON:0001869;8.40e-10;32!UBERON:0000178;1.95e-09;15!UBERON:0000179;1.95e-09;15!UBERON:0000463;1.95e-09;15!UBERON:0002619;3.22e-08;22!UBERON:0000125;5.69e-08;9!UBERON:0002308;5.69e-08;9!UBERON:0002420;6.03e-08;9!UBERON:0007245;6.03e-08;9!UBERON:0010009;6.03e-08;9!UBERON:0010011;6.03e-08;9!UBERON:0000454;6.03e-08;9!UBERON:0001950;5.79e-07;20!UBERON:0000956;9.46e-07;25!UBERON:0000203;9.46e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.98e-46,114;UBERON:0002390,5.91e-45,98;UBERON:0003061,5.91e-45,98;UBERON:0002193,9.89e-40,108;UBERON:0002371,1.24e-36,76;UBERON:0001474,2.25e-32,82;UBERON:0002405,3.80e-31,93;UBERON:0004765,1.29e-27,90;UBERON:0001434,1.16e-23,100;UBERON:0001049,1.92e-21,56;UBERON:0005068,1.92e-21,56;UBERON:0006241,1.92e-21,56;UBERON:0007135,1.92e-21,56;UBERON:0000073,1.61e-19,53;UBERON:0002616,1.61e-19,53;UBERON:0003081,3.77e-16,203;UBERON:0002780,9.76e-16,41;UBERON:0001890,9.76e-16,41;UBERON:0003080,9.76e-16,41;UBERON:0006240,9.76e-16,41;UBERON:0000955,6.91e-14,68;UBERON:0006238,6.91e-14,68;UBERON:0003075,1.36e-13,82;UBERON:0007284,1.36e-13,82;UBERON:0001017,6.58e-13,81;UBERON:0002346,2.49e-12,86;UBERON:0003528,5.56e-12,34;UBERON:0002020,5.56e-12,34;UBERON:0001893,1.17e-11,34;UBERON:0001016,4.65e-11,89;UBERON:0002791,1.09e-10,32;UBERON:0001869,2.17e-10,32;UBERON:0000178,1.95e-09,15;UBERON:0000179,1.95e-09,15;UBERON:0000463,1.95e-09,15;UBERON:0003056,4.70e-09,61;UBERON:0002204,1.05e-08,167;UBERON:0000479,1.71e-08,773;UBERON:0002619,4.83e-08,22;UBERON:0010371,4.97e-08,104;UBERON:0000125,6.16e-08,9;UBERON:0002308,6.16e-08,9;UBERON:0002420,6.22e-08,9;UBERON:0007245,6.22e-08,9;UBERON:0010009,6.22e-08,9;UBERON:0010011,6.22e-08,9;UBERON:0000454,6.22e-08,9;UBERON:0003076,5.82e-07,15;UBERON:0003057,5.82e-07,15;UBERON:0001950,8.41e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,99.5211620427727,71.0084386479843,141.192304464261,0,0,0,0,0,0.293600439334847,170.076590419286,239.851159174289,150.605544276801,14.1066748771152,7.77344798445551,17.7727141667589,345.902410056584,319.683048360733,270.481228224415,440.220595899367,416.101902678088,456.507190699383,401.3308872894,413.187219631439,280.467924647862,447.479893596131,404.073411923475,375.131367866327,442.369497925121,361.327742676588,230.791018525102,535.646811649079,399.877567736813,437.945931172343,240.131746535929,296.402995225745,185.833991232255,420.22297753419,384.687182340593,286.498234537964,528.375943034931,517.83253799126,379.211722855134,234.895007021747,327.767096028933,184.181109490595,156.751422443461,135.216334777768,144.664465400779,175.120335957386,154.832376519593,206.210927732354,165.307391369924,146.004841064132,162.02310438923,1.75996244461323,2.18455444504853,0,5.54749289336459,0.400395987036012,1.72425731986345,1.98313461835459,2.86216126360609,1.70763890732835,6.45960908308033,1.91136614062614,2.64342657158052,32.5094966529291,0.263384084775077,0.196709770113833,0,1.64481199199607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,1.59282707162048,0.651083453856419,0,4.36667845325541,2.55973222308837,1.24930726552346,6.62976305723247,2.46338399076314,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.351339142772504,7.92423406761161,0,0,1.9472843619281,2.43781632218974,14.2265017755186,6.43924685624423,8.00792875092179,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,622.003570298219,779.438330938134,0,0,0,0,0,3.19201543978521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404493924480493,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.4070371610261,98.0477870933406,151.009260885348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4059451602976,38.1715389488416,80.116897003552,0,0,0,0,0,0,0,4.72873824484625,0.646882724578552,5.51875056002918,0,0,0,0.837581326671744,0,798.441487527696,646.188751880694,736.416367375835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.583031654006,80.2456827045255,58.379974118484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1352180499991,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54911749049875,0,0,0,0,0,0.422215270595328,0,0,0,0,2.68120910214315,0,20.5233485693379,0,0,0,0,118.742740560328,84.8747299928037,142.411796793541,62.8931887208563,75.6906582478597,142.015655151205,97.7456901400988,126.106903030789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01268954180134,0,0,0,0.425846237690326,2.40453741329035,0.307240764308458,0.223676107892416,0.667396566847634,0,0,0,0,0,0,0,18.7530469468024,0,0,0,0.47748896947538,4.15750553165694,0,19.882952955326,6.89280140411512,0,0,0,8.76691148304707,0.276283915531148,0,0,0,0,0,0,0,10.8507746200627,126.926038943878,0,0.969332746095218,8.99850552169957,3.99227596002388,0,0,3.62499787717397,0,0,0,0,0,0,18.6005691020906,5.42683973814336,4.5774520895125,1.65868889896837,2.95547618953547,0.438770794307945,0,0,1.46205491157214,0,0,0,0,4.14701507651495,0.915975934018623,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76915129006678,0.611030144933625,0,0,0,6.13350310124161,0.802577647298789,1.63985112007737,0,0,0,0.789168805698781,1.20990716048664,0.30607276163049,52.571234250902,0,0,0,0,0,0,0,0,0,0,0,4.19344003780872,0,0,0,0,2.32773639572207,0,3.61569185248852,0,0,1.26621591911757,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,21.0147101048426,17.7976992559591,5.10986352267889,0,0,2.79282401272254,0.687481272035051,15.7932065406899,5.99037001496973,10.7306512034143,10.489058499768,4.90439349153102,0,0,0,0,0,0,0,29.4234985229442,5.31193283835145,0,0,0,0,0,0.971992906528395,0,4.09789677955831,3.19972987623488,0,0.537862017998534,0,0.714695326373367,15.8902072887704,0,0,0,0,0,0,0,0,3.22414914091781,7.95041333473328,13.8332763306859,12.4298645638129,0,0,55.956604185472,7.8602152549833,63.3785754681209,31.2584593741529,0,0,0,1.08803560673895,0,0.919036730290385,0.327872630709804,0,3.54427271986794,6.10131324509816,10.516038179346,26.3768230017433,16.6393577305278,14.7789439000493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22162962682788,0,0.132864840313363,0.327130788511688,0,0,0,0,0.213383459388282,0,0,0,0,6.22077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28458450192919,1.41696576325585,12.6110748655149,1.23069818544453,0,0.553258019713743,1.61475645631851,7.13847101295772,0,0,0,0,0,0,0,4.28698871590766,0,2.34454203369928,0,0,0,1.48582686160468,13.2783276764354,9.71427943555565,1.45856363445986,0,0,0,0,0,13.9282477328355,6.38939072215766,4.85572483389305,1.59363533945908,3.37069006618028,0,0,4.21412344456357,1.31545547125698,0,0,1.88383422841234,8.64135744538011,0,0,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| ||
|short_description=p1@SLC11A1 | |||
}} | }} |
Latest revision as of 17:16, 24 September 2015
Short description: | p1@SLC11A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC11A1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000469799, ENST00000471875, ENST00000481524, ENST00000492413, ENST00000494322_5end |
EntrezGene: | SLC11A1 |
HGNC: | 10907 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.15e-55 | 72 |
defensive cell | 8.09e-54 | 48 |
phagocyte | 8.09e-54 | 48 |
monopoietic cell | 1.21e-51 | 59 |
monocyte | 1.21e-51 | 59 |
monoblast | 1.21e-51 | 59 |
promonocyte | 1.21e-51 | 59 |
macrophage dendritic cell progenitor | 3.16e-49 | 61 |
classical monocyte | 5.99e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.99e-48 | 42 |
granulocyte monocyte progenitor cell | 1.65e-44 | 67 |
myeloid lineage restricted progenitor cell | 7.81e-44 | 66 |
leukocyte | 2.80e-39 | 136 |
nongranular leukocyte | 2.52e-36 | 115 |
myeloid cell | 8.96e-32 | 108 |
common myeloid progenitor | 8.96e-32 | 108 |
hematopoietic lineage restricted progenitor cell | 6.92e-30 | 120 |
hematopoietic stem cell | 1.07e-28 | 168 |
hematopoietic oligopotent progenitor cell | 2.93e-26 | 161 |
hematopoietic multipotent progenitor cell | 2.93e-26 | 161 |
hematopoietic cell | 9.91e-26 | 177 |
intermediate monocyte | 1.19e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.19e-10 | 9 |
granulocyte | 1.91e-10 | 8 |
macrophage | 4.01e-07 | 6 |
blood cell | 6.27e-07 | 11 |