FFCP PHASE1:Hg19::chr2:219247042..219247053,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6556 | |EntrezGene=6556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10907 | |HGNC=10907 | ||
|TSSclassifier=strong | |||
|UniProt=C0H5Y3 | |UniProt=C0H5Y3 | ||
|association_with_transcript=10bp_to_ENST00000539932_5end | |association_with_transcript=10bp_to_ENST00000539932_5end | ||
|cluster_id=chr2:219247042..219247053,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_SLC11A1_5end | |description=CAGE_peak_4_at_SLC11A1_5end | ||
|id=chr2:219247042..219247053,+ | |id=chr2:219247042..219247053,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.36e-55!76;CL:0002057!2.16e-54!42;CL:0002194!1.34e-50!63;CL:0000576!1.34e-50!63;CL:0000040!1.34e-50!63;CL:0000559!1.34e-50!63;CL:0000860!1.30e-49!45;CL:0002009!1.94e-48!65;CL:0000839!1.39e-43!70;CL:0000557!1.08e-42!71;CL:0000738!2.40e-38!140;CL:0002087!2.61e-35!119;CL:0000763!1.31e-30!112;CL:0000049!1.31e-30!112;CL:0002031!4.30e-29!124;CL:0000037!2.20e-26!172;CL:0000566!2.20e-26!172;CL:0002032!1.53e-24!165;CL:0000837!1.53e-24!165;CL:0000988!1.47e-23!182;CL:0000094!1.01e-11!8;CL:0002393!1.02e-11!9;CL:0002397!1.02e-11!9;CL:0000081!6.50e-08!11 | |ontology_enrichment_celltype=CL:0000766!1.36e-55!76;CL:0002057!2.16e-54!42;CL:0002194!1.34e-50!63;CL:0000576!1.34e-50!63;CL:0000040!1.34e-50!63;CL:0000559!1.34e-50!63;CL:0000860!1.30e-49!45;CL:0002009!1.94e-48!65;CL:0000839!1.39e-43!70;CL:0000557!1.08e-42!71;CL:0000738!2.40e-38!140;CL:0002087!2.61e-35!119;CL:0000763!1.31e-30!112;CL:0000049!1.31e-30!112;CL:0002031!4.30e-29!124;CL:0000037!2.20e-26!172;CL:0000566!2.20e-26!172;CL:0002032!1.53e-24!165;CL:0000837!1.53e-24!165;CL:0000988!1.47e-23!182;CL:0000094!1.01e-11!8;CL:0002393!1.02e-11!9;CL:0002397!1.02e-11!9;CL:0000081!6.50e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.48e-62;33!CL:0002057;7.48e-62;33!CL:0000473;4.33e-60;39!CL:0000234;4.33e-60;39!CL:0000576;3.08e-46;48!CL:0000766;7.66e-40;69!CL:0000094;1.73e-17;8!CL:0000763;2.44e-17;100!CL:0002087;1.18e-14;104!CL:0002393;3.02e-12;6!CL:0002397;3.02e-12;6!CL:0000081;3.11e-12;11!CL:0000738;1.07e-11;136!CL:0000235;1.72e-11;6!CL:0000775;3.58e-08;3!CL:0000988;2.32e-07;177!CL:0000875;6.92e-07;3!CL:0002396;6.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.61e-95,48;CL:0000234,2.61e-95,48;CL:0000766,2.82e-88,72;CL:0000860,9.71e-85,42;CL:0002057,9.71e-85,42;CL:0002194,2.31e-79,59;CL:0000576,2.31e-79,59;CL:0000040,2.31e-79,59;CL:0000559,2.31e-79,59;CL:0002009,2.72e-76,61;CL:0000839,2.02e-69,66;CL:0000557,3.61e-68,67;CL:0000763,2.72e-53,108;CL:0000049,2.72e-53,108;CL:0000738,3.35e-52,136;CL:0002087,5.43e-47,115;CL:0002031,4.53e-39,120;CL:0000037,9.54e-39,168;CL:0002032,1.04e-36,161;CL:0000837,1.04e-36,161;CL:0000988,7.65e-36,177;CL:0000094,1.74e-17,8;CL:0002393,1.76e-17,9;CL:0002397,1.76e-17,9;CL:0000081,3.12e-12,11;CL:0000235,1.69e-11,6;CL:0000134,9.03e-10,354;CL:0002320,2.88e-09,361;CL:0000775,3.59e-08,3;CL:0000219,1.59e-07,386;CL:0000875,6.86e-07,3;CL:0002396,6.86e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.17e-60;42!CL:0000049;1.74e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.36e-46!102;UBERON:0003061!6.36e-46!102;UBERON:0002193!2.37e-42!112;UBERON:0007023!5.11e-36!115;UBERON:0002371!1.02e-35!80;UBERON:0001474!6.76e-32!86;UBERON:0002405!2.22e-27!115;UBERON:0004765!2.12e-24!101;UBERON:0001434!2.12e-24!101;UBERON:0003081!4.29e-15!216;UBERON:0000178!4.42e-11!15;UBERON:0000179!4.42e-11!15;UBERON:0000463!4.42e-11!15;UBERON:0001049!7.49e-11!57;UBERON:0005068!7.49e-11!57;UBERON:0006241!7.49e-11!57;UBERON:0007135!7.49e-11!57;UBERON:0002204!3.16e-10!167;UBERON:0002020!1.11e-08!34;UBERON:0003528!1.11e-08!34;UBERON:0001893!1.59e-08!34;UBERON:0002308!1.68e-08!9;UBERON:0000125!1.68e-08!9;UBERON:0002616!1.70e-08!59;UBERON:0002791!4.83e-08!33;UBERON:0002780!5.53e-08!41;UBERON:0001890!5.53e-08!41;UBERON:0006240!5.53e-08!41;UBERON:0003075!7.18e-08!86;UBERON:0007284!7.18e-08!86;UBERON:0003080!1.15e-07!42;UBERON:0001869!2.21e-07!32;UBERON:0002346!3.93e-07!90;UBERON:0009663!6.58e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.12e-17;15!UBERON:0000179;3.12e-17;15!UBERON:0000463;3.12e-17;15!UBERON:0002390;1.12e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.39e-74,98;UBERON:0003061,7.39e-74,98;UBERON:0002193,1.22e-67,108;UBERON:0002371,2.28e-58,76;UBERON:0001474,5.07e-53,82;UBERON:0002405,4.13e-51,93;UBERON:0004765,5.35e-47,90;UBERON:0001434,7.99e-41,100;UBERON:0003081,1.66e-27,203;UBERON:0002204,1.13e-18,167;UBERON:0000178,3.20e-17,15;UBERON:0000179,3.20e-17,15;UBERON:0000463,3.20e-17,15;UBERON:0000926,2.87e-12,315;UBERON:0004120,2.87e-12,315;UBERON:0006603,2.87e-12,315;UBERON:0002384,4.44e-09,371 | |||
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|short_description=p4@SLC11A1 | |short_description=p4@SLC11A1 | ||
}} | }} |
Latest revision as of 17:18, 24 September 2015
Short description: | p4@SLC11A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC11A1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 10bp_to_ENST00000539932_5end |
EntrezGene: | SLC11A1 |
HGNC: | 10907 |
UniProt: | C0H5Y3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.39e-74 | 98 |
blood island | 7.39e-74 | 98 |
hemolymphoid system | 1.22e-67 | 108 |
bone marrow | 2.28e-58 | 76 |
bone element | 5.07e-53 | 82 |
immune system | 4.13e-51 | 93 |
skeletal element | 5.35e-47 | 90 |
skeletal system | 7.99e-41 | 100 |
lateral plate mesoderm | 1.66e-27 | 203 |
musculoskeletal system | 1.13e-18 | 167 |
blood | 3.20e-17 | 15 |
haemolymphatic fluid | 3.20e-17 | 15 |
organism substance | 3.20e-17 | 15 |
mesoderm | 2.87e-12 | 315 |
mesoderm-derived structure | 2.87e-12 | 315 |
presumptive mesoderm | 2.87e-12 | 315 |
connective tissue | 4.44e-09 | 371 |