FFCP PHASE1:Hg19::chr6:130544130..130544137,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:130544130..130544137,- to FFCP PHASE1:Hg19::chr6:130544130..130544137,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=154075 | |EntrezGene=154075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21574 | |HGNC=21574 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6K7 | |UniProt=Q8N6K7 | ||
|association_with_transcript=-31bp_to_ENST00000439090,NM_001017373,uc003qbw.2_5end | |||
|cluster_id=chr6:130544130..130544137,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_6_at_SAMD3_5end | |||
|id=chr6:130544130..130544137,- | |||
|ontology_enrichment_celltype=CL:0000791!2.29e-41!18;CL:0000789!2.29e-41!18;CL:0002420!2.29e-41!18;CL:0002419!2.29e-41!18;CL:0000790!2.29e-41!18;CL:0000084!3.65e-35!25;CL:0000827!3.65e-35!25;CL:0000625!6.21e-27!11;CL:0000838!5.32e-23!52;CL:0000542!1.99e-22!53;CL:0000051!1.99e-22!53;CL:0002087!6.02e-15!119;CL:0000624!3.20e-14!6;CL:0000738!3.50e-13!140;CL:0002031!6.08e-11!124;CL:0000037!5.24e-09!172;CL:0000566!5.24e-09!172;CL:0000898!1.96e-08!3;CL:0000842!4.80e-08!3;CL:0000623!4.92e-08!3;CL:0000825!4.92e-08!3;CL:0000988!4.98e-08!182;CL:0002032!1.42e-07!165;CL:0000837!1.42e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000625;8.00e-50;11!CL:0000791;3.93e-43;18!CL:0000789;3.93e-43;18!CL:0002419;3.93e-43;18!CL:0000084;2.18e-30;25!CL:0000226;1.45e-16;3!CL:0000842;1.45e-16;3!CL:0000542;1.33e-10;53!CL:0000898;1.14e-08;3!CL:0000623;3.50e-08;3!CL:0000895;4.78e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.18e-50,11;CL:0000791,3.20e-43,18;CL:0000789,3.20e-43,18;CL:0002420,3.20e-43,18;CL:0002419,3.20e-43,18;CL:0000790,3.20e-43,18;CL:0000084,1.89e-30,25;CL:0000827,1.89e-30,25;CL:0000838,2.33e-18,52;CL:0000542,5.88e-18,53;CL:0000051,5.88e-18,53;CL:0000226,2.06e-16,3;CL:0000842,2.06e-16,3;CL:0002087,3.03e-10,115;CL:0000738,2.65e-09,136;CL:0000898,1.28e-08,3;CL:0000623,3.90e-08,3;CL:0000825,3.90e-08,3;CL:0000810,5.69e-07,1;CL:0000895,5.69e-07,1;CL:0002436,5.69e-07,1;CL:0002427,5.69e-07,1;CL:0002428,5.69e-07,1;CL:0002429,5.69e-07,1;CL:0002433,5.69e-07,1;CL:0002431,5.69e-07,1;CL:0002432,5.69e-07,1;CL:0000037,7.56e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;3.93e-43;18!CL:0000051;1.33e-10;53!CL:0002427;4.78e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.38e-14!15;UBERON:0000179!1.38e-14!15;UBERON:0000463!1.38e-14!15;UBERON:0004177!7.44e-11!7;UBERON:0002370!3.50e-09!4;UBERON:0005058!3.50e-09!4;UBERON:0009113!3.50e-09!4;UBERON:0003295!3.50e-09!4;UBERON:0005562!3.50e-09!4;UBERON:0007023!6.46e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.08e-27;15!UBERON:0000179;2.08e-27;15!UBERON:0000463;2.08e-27;15!UBERON:0002390;1.18e-11;32!UBERON:0002193;5.61e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.93e-27,15;UBERON:0000179,2.93e-27,15;UBERON:0000463,2.93e-27,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30297638858328,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0.647787332037959,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0.786021525498329,0.616804496998528,9.52963023726865,0.977766799900771,0.473447805734733,0,6.23898558556972,4.71369451959739,2.87994062958707,3.79125409271022,3.45846563259323,6.37290803043403,2.79544437826249,2.76350017785848,4.63684937176084,0.14828656316206,0.535081656179426,0,7.81834464613207,3.06576394881537,3.09264700934367,4.80737414837055,3.18565414324097,3.25541726928209,6.65316431113862,2.71035214339991,3.32765189001488,8.74515085866421,4.73554504088034,4.10563998460523,1.81446068902259,1.87208137048455,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.18218456121156,2.37190332345469,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.07857100409308,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,1.70894156152249,0.714695326373367,2.05681136543097,1.29694662238543,1.08006287447623,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.394573622547734,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.533937062838473,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0.248298857183432,0,0.0636471582781649,0,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30297638858328,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0.647787332037959,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0.786021525498329,0.616804496998528,9.52963023726865,0.977766799900771,0.473447805734733,0,6.23898558556972,4.71369451959739,2.87994062958707,3.79125409271022,3.45846563259323,6.37290803043403,2.79544437826249,2.76350017785848,4.63684937176084,0.14828656316206,0.535081656179426,0,7.81834464613207,3.06576394881537,3.09264700934367,4.80737414837055,3.18565414324097,3.25541726928209,6.65316431113862,2.71035214339991,3.32765189001488,8.74515085866421,4.73554504088034,4.10563998460523,1.81446068902259,1.87208137048455,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.18218456121156,2.37190332345469,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.07857100409308,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,1.70894156152249,0.714695326373367,2.05681136543097,1.29694662238543,1.08006287447623,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.394573622547734,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.533937062838473,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0.248298857183432,0,0.0636471582781649,0,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p6@SAMD3 | |||
}} | }} |
Latest revision as of 17:25, 24 September 2015
Short description: | p6@SAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SAMD3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -31bp_to_ENST00000439090, NM_001017373, uc003qbw.2_5end |
EntrezGene: | SAMD3 |
HGNC: | 21574 |
UniProt: | Q8N6K7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 2.93e-27 | 15 |
haemolymphatic fluid | 2.93e-27 | 15 |
organism substance | 2.93e-27 | 15 |