FFCP PHASE1:Hg19::chr4:113207001..113207043,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:113207001..113207043,- to FFCP PHASE1:Hg19::chr4:113207001..113207043,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92610 | |EntrezGene=92610 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19075 | |HGNC=19075 | ||
|TSSclassifier=strong | |||
|UniProt=C9JPF7 | |UniProt=C9JPF7 | ||
|association_with_transcript=0bp_to_ENST00000438746_5end | |||
|cluster_id=chr4:113207001..113207043,- | |||
|description=CAGE_peak_2_at_TIFA_5end | |||
|id=chr4:113207001..113207043,- | |||
|ontology_enrichment_celltype=CL:0002087!3.80e-31!119;CL:0000738!1.68e-30!140;CL:0000037!1.49e-27!172;CL:0000566!1.49e-27!172;CL:0000542!3.25e-27!53;CL:0000051!3.25e-27!53;CL:0000988!4.79e-27!182;CL:0002031!4.95e-27!124;CL:0000838!1.14e-26!52;CL:0002032!3.21e-26!165;CL:0000837!3.21e-26!165;CL:0000945!1.07e-15!24;CL:0000826!1.07e-15!24;CL:0000084!1.90e-11!25;CL:0000827!1.90e-11!25;CL:0000236!1.99e-09!14;CL:0000791!7.84e-09!18;CL:0000789!7.84e-09!18;CL:0002420!7.84e-09!18;CL:0002419!7.84e-09!18;CL:0000790!7.84e-09!18;CL:0000766!1.37e-08!76;CL:0002009!7.26e-08!65;CL:0002194!7.31e-08!63;CL:0000576!7.31e-08!63;CL:0000040!7.31e-08!63;CL:0000559!7.31e-08!63;CL:0000557!2.46e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.76e-16;53!CL:0000945;3.30e-16;24!CL:0000084;9.19e-12;25!CL:0002087;1.03e-10;104!CL:0000791;4.69e-09;18!CL:0000789;4.69e-09;18!CL:0002419;4.69e-09;18!CL:0000236;4.82e-09;13!CL:0000860;2.69e-07;33!CL:0002057;2.69e-07;33!CL:0000738;4.73e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.50e-31,115;CL:0000738,1.86e-30,136;CL:0000037,2.03e-27,168;CL:0000542,2.27e-27,53;CL:0000051,2.27e-27,53;CL:0002031,3.35e-27,120;CL:0000988,7.58e-27,177;CL:0000838,8.06e-27,52;CL:0002032,4.36e-26,161;CL:0000837,4.36e-26,161;CL:0000945,8.78e-16,24;CL:0000826,8.78e-16,24;CL:0000084,1.65e-11,25;CL:0000827,1.65e-11,25;CL:0000236,1.78e-09,14;CL:0000791,7.09e-09,18;CL:0000789,7.09e-09,18;CL:0002420,7.09e-09,18;CL:0002419,7.09e-09,18;CL:0000790,7.09e-09,18;CL:0000766,1.80e-08,72;CL:0002194,1.17e-07,59;CL:0000576,1.17e-07,59;CL:0000040,1.17e-07,59;CL:0000559,1.17e-07,59;CL:0002009,1.17e-07,61;CL:0000557,3.35e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000051;1.76e-16;53!CL:0000790;4.69e-09;18 | |||
|ontology_enrichment_disease=DOID:0060058!3.07e-07!10;DOID:2531!7.87e-07!51;DOID:0060083!7.87e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.92e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.83e-07,10;DOID:2531,7.89e-07,51;DOID:0060083,7.89e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.02e-13!112;UBERON:0002390!8.73e-12!102;UBERON:0003061!8.73e-12!102;UBERON:0003081!2.00e-10!216;UBERON:0002405!7.10e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.89e-13,108;UBERON:0002390,1.27e-11,98;UBERON:0003061,1.27e-11,98;UBERON:0003081,9.97e-11,203;UBERON:0002405,1.26e-09,93 | |||
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| ||
|short_description=p2@TIFA | |||
}} | }} |
Latest revision as of 17:50, 24 September 2015
Short description: | p2@TIFA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TIFA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000438746_5end |
EntrezGene: | TIFA |
HGNC: | 19075 |
UniProt: | C9JPF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 3.50e-31 | 115 |
leukocyte | 1.86e-30 | 136 |
hematopoietic stem cell | 2.03e-27 | 168 |
lymphocyte | 2.27e-27 | 53 |
common lymphoid progenitor | 2.27e-27 | 53 |
hematopoietic lineage restricted progenitor cell | 3.35e-27 | 120 |
hematopoietic cell | 7.58e-27 | 177 |
lymphoid lineage restricted progenitor cell | 8.06e-27 | 52 |
hematopoietic oligopotent progenitor cell | 4.36e-26 | 161 |
hematopoietic multipotent progenitor cell | 4.36e-26 | 161 |
lymphocyte of B lineage | 8.78e-16 | 24 |
pro-B cell | 8.78e-16 | 24 |
T cell | 1.65e-11 | 25 |
pro-T cell | 1.65e-11 | 25 |
B cell | 1.78e-09 | 14 |
mature alpha-beta T cell | 7.09e-09 | 18 |
alpha-beta T cell | 7.09e-09 | 18 |
immature T cell | 7.09e-09 | 18 |
mature T cell | 7.09e-09 | 18 |
immature alpha-beta T cell | 7.09e-09 | 18 |
myeloid leukocyte | 1.80e-08 | 72 |
monopoietic cell | 1.17e-07 | 59 |
monocyte | 1.17e-07 | 59 |
monoblast | 1.17e-07 | 59 |
promonocyte | 1.17e-07 | 59 |
macrophage dendritic cell progenitor | 1.17e-07 | 61 |
granulocyte monocyte progenitor cell | 3.35e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.89e-13 | 108 |
hematopoietic system | 1.27e-11 | 98 |
blood island | 1.27e-11 | 98 |
lateral plate mesoderm | 9.97e-11 | 203 |
immune system | 1.26e-09 | 93 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.83e-07 | 10 |
hematologic cancer | 7.89e-07 | 51 |
immune system cancer | 7.89e-07 | 51 |