FFCP PHASE1:Hg19::chr4:113207277..113207292,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92610 | |EntrezGene=92610 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19075 | |HGNC=19075 | ||
|TSSclassifier=strong | |||
|UniProt=Q96CG3 | |UniProt=Q96CG3 | ||
|association_with_transcript=-218bp_to_ENST00000361717,NM_052864,uc003ial.2_5end | |association_with_transcript=-218bp_to_ENST00000361717,NM_052864,uc003ial.2_5end | ||
|cluster_id=chr4:113207277..113207292,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_10_at_TIFA_5end | |description=CAGE_peak_10_at_TIFA_5end | ||
|id=chr4:113207277..113207292,- | |id=chr4:113207277..113207292,- | ||
|ontology_enrichment_celltype=CL:0000860;1.06e-89;33!CL:0002057;1.06e-89;33!CL:0000473;2.08e-69;39!CL:0000234;2.08e-69;39!CL:0000576;1.78e-41;48!CL:0000766;2.15e-23;69!CL:0000763;1.08e-15;100!CL:0002087;3.66e-13;104!CL:0000738;1.19e-07;136 | |ontology_enrichment_celltype=CL:0002194!8.34e-41!63;CL:0000576!8.34e-41!63;CL:0000040!8.34e-41!63;CL:0000559!8.34e-41!63;CL:0002009!2.93e-39!65;CL:0002057!4.29e-38!42;CL:0000839!8.87e-36!70;CL:0000557!3.85e-35!71;CL:0000860!5.03e-35!45;CL:0000766!3.34e-32!76;CL:0002087!2.63e-22!119;CL:0002031!9.73e-20!124;CL:0000763!8.13e-19!112;CL:0000049!8.13e-19!112;CL:0000738!2.03e-17!140;CL:0000988!7.30e-14!182;CL:0002032!2.14e-12!165;CL:0000837!2.14e-12!165;CL:0000037!2.52e-12!172;CL:0000566!2.52e-12!172;CL:0000080!3.80e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.06e-89;33!CL:0002057;1.06e-89;33!CL:0000473;2.08e-69;39!CL:0000234;2.08e-69;39!CL:0000576;1.78e-41;48!CL:0000766;2.15e-23;69!CL:0000763;1.08e-15;100!CL:0002087;3.66e-13;104!CL:0000738;1.19e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.64e-78,42;CL:0002057,1.64e-78,42;CL:0000473,5.15e-76,48;CL:0000234,5.15e-76,48;CL:0002194,2.62e-60,59;CL:0000576,2.62e-60,59;CL:0000040,2.62e-60,59;CL:0000559,2.62e-60,59;CL:0002009,2.79e-58,61;CL:0000839,9.69e-54,66;CL:0000557,6.53e-53,67;CL:0000766,4.13e-49,72;CL:0000763,5.14e-32,108;CL:0000049,5.14e-32,108;CL:0002087,6.40e-30,115;CL:0002031,1.43e-28,120;CL:0000738,6.50e-25,136;CL:0000988,1.00e-20,177;CL:0002032,1.23e-20,161;CL:0000837,1.23e-20,161;CL:0000037,1.15e-19,168;CL:0000134,8.52e-08,354;CL:0002320,1.39e-07,361;CL:0000219,7.74e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.11e-55;42!CL:0000049;7.30e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.61e-31!102;UBERON:0003061!1.61e-31!102;UBERON:0002371!4.07e-30!80;UBERON:0001474!4.46e-29!86;UBERON:0002193!1.02e-27!112;UBERON:0004765!2.05e-26!101;UBERON:0001434!2.05e-26!101;UBERON:0002405!6.06e-22!115;UBERON:0002204!6.67e-14!167;UBERON:0003081!3.69e-13!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.00e-46,76;UBERON:0001474,7.03e-43,82;UBERON:0002390,1.84e-39,98;UBERON:0003061,1.84e-39,98;UBERON:0004765,7.06e-39,90;UBERON:0002405,1.49e-37,93;UBERON:0002193,1.35e-35,108;UBERON:0001434,9.16e-35,100;UBERON:0002204,8.44e-20,167;UBERON:0003081,1.01e-17,203;UBERON:0000926,2.18e-10,315;UBERON:0004120,2.18e-10,315;UBERON:0006603,2.18e-10,315;UBERON:0002384,2.70e-07,371 | |||
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| ||
|short_description=p10@TIFA | |short_description=p10@TIFA | ||
}} | }} |
Latest revision as of 17:55, 24 September 2015
Short description: | p10@TIFA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TIFA_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -218bp_to_ENST00000361717, NM_052864, uc003ial.2_5end |
EntrezGene: | TIFA |
HGNC: | 19075 |
UniProt: | Q96CG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.64e-78 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-78 | 42 |
defensive cell | 5.15e-76 | 48 |
phagocyte | 5.15e-76 | 48 |
monopoietic cell | 2.62e-60 | 59 |
monocyte | 2.62e-60 | 59 |
monoblast | 2.62e-60 | 59 |
promonocyte | 2.62e-60 | 59 |
macrophage dendritic cell progenitor | 2.79e-58 | 61 |
myeloid lineage restricted progenitor cell | 9.69e-54 | 66 |
granulocyte monocyte progenitor cell | 6.53e-53 | 67 |
myeloid leukocyte | 4.13e-49 | 72 |
myeloid cell | 5.14e-32 | 108 |
common myeloid progenitor | 5.14e-32 | 108 |
nongranular leukocyte | 6.40e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.43e-28 | 120 |
leukocyte | 6.50e-25 | 136 |
hematopoietic cell | 1.00e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.23e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-20 | 161 |
hematopoietic stem cell | 1.15e-19 | 168 |
mesenchymal cell | 8.52e-08 | 354 |
connective tissue cell | 1.39e-07 | 361 |
motile cell | 7.74e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.00e-46 | 76 |
bone element | 7.03e-43 | 82 |
hematopoietic system | 1.84e-39 | 98 |
blood island | 1.84e-39 | 98 |
skeletal element | 7.06e-39 | 90 |
immune system | 1.49e-37 | 93 |
hemolymphoid system | 1.35e-35 | 108 |
skeletal system | 9.16e-35 | 100 |
musculoskeletal system | 8.44e-20 | 167 |
lateral plate mesoderm | 1.01e-17 | 203 |
mesoderm | 2.18e-10 | 315 |
mesoderm-derived structure | 2.18e-10 | 315 |
presumptive mesoderm | 2.18e-10 | 315 |
connective tissue | 2.70e-07 | 371 |