FFCP PHASE1:Hg19::chr3:129407485..129407505,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23023 | |EntrezGene=23023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29116 | |HGNC=29116 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003emy.3_5end | |association_with_transcript=0bp_to_uc003emy.3_5end | ||
|cluster_id=chr3:129407485..129407505,- | |||
|coexpression_cluster_id=C1127 | |||
|description=CAGE_peak_5_at_TMCC1_5end | |description=CAGE_peak_5_at_TMCC1_5end | ||
|id=chr3:129407485..129407505,- | |id=chr3:129407485..129407505,- | ||
|ontology_enrichment_celltype=CL:0000128!2.02e-07!7;CL:0000126!2.02e-07!7;CL:0000127!2.02e-07!7;CL:0002453!2.02e-07!7 | |ontology_enrichment_celltype=CL:0000128!2.02e-07!7;CL:0000126!2.02e-07!7;CL:0000127!2.02e-07!7;CL:0002453!2.02e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.28e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.75e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.27e-18;82!UBERON:0004161;1.00e-08;11!UBERON:0006215;1.06e-08;3!UBERON:0006241;3.06e-08;3!UBERON:0003057;3.06e-08;3!UBERON:0009497;3.16e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.58e-63!57;UBERON:0005068!8.58e-63!57;UBERON:0006241!8.58e-63!57;UBERON:0007135!8.58e-63!57;UBERON:0001017!7.19e-59!82;UBERON:0005743!5.40e-57!86;UBERON:0007023!1.12e-56!115;UBERON:0000073!1.77e-56!94;UBERON:0001016!1.77e-56!94;UBERON:0002616!4.17e-52!59;UBERON:0000955!1.47e-48!69;UBERON:0006238!1.47e-48!69;UBERON:0002780!6.67e-46!41;UBERON:0001890!6.67e-46!41;UBERON:0006240!6.67e-46!41;UBERON:0003075!1.07e-45!86;UBERON:0007284!1.07e-45!86;UBERON:0003080!1.83e-44!42;UBERON:0002346!1.11e-42!90;UBERON:0001893!1.32e-39!34;UBERON:0002020!1.63e-39!34;UBERON:0003528!1.63e-39!34;UBERON:0002791!2.48e-38!33;UBERON:0001869!8.29e-37!32;UBERON:0003056!1.57e-30!61;UBERON:0004121!3.49e-30!169;UBERON:0000924!6.92e-29!173;UBERON:0006601!6.92e-29!173;UBERON:0000153!1.03e-28!129;UBERON:0007811!1.03e-28!129;UBERON:0000956!4.19e-28!25;UBERON:0000203!4.19e-28!25;UBERON:0000033!4.60e-28!123;UBERON:0002619!2.96e-25!22;UBERON:0001950!7.79e-23!20;UBERON:0000025!4.72e-19!194;UBERON:0003076!8.98e-19!15;UBERON:0003057!8.98e-19!15;UBERON:0004111!7.93e-17!241;UBERON:0004732!2.97e-16!13;UBERON:0004733!5.74e-15!12;UBERON:0002028!5.74e-15!12;UBERON:0007277!5.74e-15!12;UBERON:0000477!2.61e-13!286;UBERON:0002308!8.70e-13!9;UBERON:0000125!8.70e-13!9;UBERON:0002420!1.82e-12!9;UBERON:0007245!1.82e-12!9;UBERON:0010009!1.82e-12!9;UBERON:0010011!1.82e-12!9;UBERON:0000454!1.82e-12!9;UBERON:0002680!2.58e-11!9;UBERON:0001895!2.58e-11!9;UBERON:0010092!2.58e-11!9;UBERON:0000475!4.46e-11!365;UBERON:0009663!2.66e-10!7;UBERON:0000483!4.11e-10!309;UBERON:0000119!8.55e-10!312;UBERON:0000064!1.01e-09!219;UBERON:0002298!6.34e-09!8;UBERON:0000200!7.89e-09!6;UBERON:0001871!3.22e-08!7;UBERON:0000062!7.74e-08!511;UBERON:0001894!1.23e-07!7;UBERON:0006222!1.23e-07!7;UBERON:0002037!1.45e-07!6;UBERON:0006215!1.45e-07!6;UBERON:0000349!1.94e-07!5;UBERON:0001872!2.19e-07!5;UBERON:0000481!3.40e-07!347;UBERON:0000468!4.73e-07!659;UBERON:0002021!4.95e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!8.58e-63!57;UBERON:0005068!8.58e-63!57;UBERON:0006241!8.58e-63!57;UBERON:0007135!8.58e-63!57;UBERON:0001017!7.19e-59!82;UBERON:0005743!5.40e-57!86;UBERON:0007023!1.12e-56!115;UBERON:0000073!1.77e-56!94;UBERON:0001016!1.77e-56!94;UBERON:0002616!4.17e-52!59;UBERON:0000955!1.47e-48!69;UBERON:0006238!1.47e-48!69;UBERON:0002780!6.67e-46!41;UBERON:0001890!6.67e-46!41;UBERON:0006240!6.67e-46!41;UBERON:0003075!1.07e-45!86;UBERON:0007284!1.07e-45!86;UBERON:0003080!1.83e-44!42;UBERON:0002346!1.11e-42!90;UBERON:0001893!1.32e-39!34;UBERON:0002020!1.63e-39!34;UBERON:0003528!1.63e-39!34;UBERON:0002791!2.48e-38!33;UBERON:0001869!8.29e-37!32;UBERON:0003056!1.57e-30!61;UBERON:0004121!3.49e-30!169;UBERON:0000924!6.92e-29!173;UBERON:0006601!6.92e-29!173;UBERON:0000153!1.03e-28!129;UBERON:0007811!1.03e-28!129;UBERON:0000956!4.19e-28!25;UBERON:0000203!4.19e-28!25;UBERON:0000033!4.60e-28!123;UBERON:0002619!2.96e-25!22;UBERON:0001950!7.79e-23!20;UBERON:0000025!4.72e-19!194;UBERON:0003076!8.98e-19!15;UBERON:0003057!8.98e-19!15;UBERON:0004111!7.93e-17!241;UBERON:0004732!2.97e-16!13;UBERON:0004733!5.74e-15!12;UBERON:0002028!5.74e-15!12;UBERON:0007277!5.74e-15!12;UBERON:0000477!2.61e-13!286;UBERON:0002308!8.70e-13!9;UBERON:0000125!8.70e-13!9;UBERON:0002420!1.82e-12!9;UBERON:0007245!1.82e-12!9;UBERON:0010009!1.82e-12!9;UBERON:0010011!1.82e-12!9;UBERON:0000454!1.82e-12!9;UBERON:0002680!2.58e-11!9;UBERON:0001895!2.58e-11!9;UBERON:0010092!2.58e-11!9;UBERON:0000475!4.46e-11!365;UBERON:0009663!2.66e-10!7;UBERON:0000483!4.11e-10!309;UBERON:0000119!8.55e-10!312;UBERON:0000064!1.01e-09!219;UBERON:0002298!6.34e-09!8;UBERON:0000200!7.89e-09!6;UBERON:0001871!3.22e-08!7;UBERON:0000062!7.74e-08!511;UBERON:0001894!1.23e-07!7;UBERON:0006222!1.23e-07!7;UBERON:0002037!1.45e-07!6;UBERON:0006215!1.45e-07!6;UBERON:0000349!1.94e-07!5;UBERON:0001872!2.19e-07!5;UBERON:0000481!3.40e-07!347;UBERON:0000468!4.73e-07!659;UBERON:0002021!4.95e-07!5 | ||
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|short_description=p5@TMCC1 | |short_description=p5@TMCC1 | ||
}} | }} |
Latest revision as of 18:06, 24 September 2015
Short description: | p5@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMCC1_5end |
Coexpression cluster: | C1127_cerebellum_substantia_spinal_thalamus_medulla_occipital_globus |
Association with transcript: | 0bp_to_uc003emy.3_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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hepatocyte | 3.75e-10 | 12 |