FFCP PHASE1:Hg19::chr19:6710641..6710652,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=718 | |EntrezGene=718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |HGNC=1318 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=315bp_to_ENST00000466344_5end | |association_with_transcript=315bp_to_ENST00000466344_5end | ||
|cluster_id=chr19:6710641..6710652,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_37_at_C3_5end | |description=CAGE_peak_37_at_C3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000860!4.56e-10!45;CL:0000453!2.35e-09!5;CL:0002057!1.98e-08!42;CL:0002009!1.26e-07!65;CL:0000557!1.30e-07!71;CL:0002194!6.70e-07!63;CL:0000576!6.70e-07!63;CL:0000040!6.70e-07!63;CL:0000559!6.70e-07!63;CL:0000839!9.42e-07!70 | |ontology_enrichment_celltype=CL:0000860!4.56e-10!45;CL:0000453!2.35e-09!5;CL:0002057!1.98e-08!42;CL:0002009!1.26e-07!65;CL:0000557!1.30e-07!71;CL:0002194!6.70e-07!63;CL:0000576!6.70e-07!63;CL:0000040!6.70e-07!63;CL:0000559!6.70e-07!63;CL:0000839!9.42e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000453;3.81e-40;5!CL:0000990;1.08e-22;8!CL:0000451;1.04e-18;10!CL:0001014;1.75e-12;2!CL:0001016;1.75e-12;2!CL:0000182;2.01e-08;12 | |ontology_enrichment_celltype_v019=CL:0000453;3.81e-40;5!CL:0000990;1.08e-22;8!CL:0000451;1.04e-18;10!CL:0001014;1.75e-12;2!CL:0001016;1.75e-12;2!CL:0000182;2.01e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,3.33e-40,5;CL:0000990,1.01e-22,8;CL:0000451,9.78e-19,10;CL:0001014,1.85e-12,2;CL:0001016,1.85e-12,2;CL:0000182,1.97e-08,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;4.59e-23;1!DOID:4549;4.59e-23;1!DOID:5861;4.59e-23;1!DOID:6496;4.59e-23;1 | |ontology_enrichment_disease_v019=DOID:3371;4.59e-23;1!DOID:4549;4.59e-23;1!DOID:5861;4.59e-23;1!DOID:6496;4.59e-23;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,4.10e-23,1;DOID:4549,4.10e-23,1;DOID:5861,4.10e-23,1;DOID:6496,4.10e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0001474!5.20e-08!86;UBERON:0002405!8.12e-07!115;UBERON:0004765!8.43e-07!101;UBERON:0001434!8.43e-07!101 | |ontology_enrichment_uberon=UBERON:0001474!5.20e-08!86;UBERON:0002405!8.12e-07!115;UBERON:0004765!8.43e-07!101;UBERON:0001434!8.43e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.05e-09;10!UBERON:0002418;1.35e-08;3!UBERON:0004755;1.35e-08;3!UBERON:0000178;9.09e-07;15!UBERON:0000179;9.09e-07;15!UBERON:0000463;9.09e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0002331;1.05e-09;10!UBERON:0002418;1.35e-08;3!UBERON:0004755;1.35e-08;3!UBERON:0000178;9.09e-07;15!UBERON:0000179;9.09e-07;15!UBERON:0000463;9.09e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.15e-09,10;UBERON:0000358,1.15e-09,10;UBERON:0000307,1.15e-09,10;UBERON:0000091,1.15e-09,10;UBERON:0000087,1.15e-09,10;UBERON:0007010,1.15e-09,10;UBERON:0007806,1.15e-09,10;UBERON:0008780,1.15e-09,10;UBERON:0005728,1.15e-09,10;UBERON:0002418,1.30e-08,3;UBERON:0004755,1.30e-08,3;UBERON:0000178,9.64e-07,15;UBERON:0000179,9.64e-07,15;UBERON:0000463,9.64e-07,15 | |||
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| ||
|short_description=p37@C3 | |short_description=p37@C3 | ||
}} | }} |
Latest revision as of 18:07, 24 September 2015
Short description: | p37@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 315bp_to_ENST00000466344_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 3.33e-40 | 5 |
conventional dendritic cell | 1.01e-22 | 8 |
dendritic cell | 9.78e-19 | 10 |
CD1a-positive Langerhans cell | 1.85e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.85e-12 | 2 |
hepatocyte | 1.97e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.15e-09 | 10 |
blastocyst | 1.15e-09 | 10 |
blastula | 1.15e-09 | 10 |
bilaminar disc | 1.15e-09 | 10 |
inner cell mass | 1.15e-09 | 10 |
cleaving embryo | 1.15e-09 | 10 |
connecting stalk | 1.15e-09 | 10 |
inner cell mass derived epiblast | 1.15e-09 | 10 |
extraembryonic mesoderm | 1.15e-09 | 10 |
cartilage tissue | 1.30e-08 | 3 |
skeletal tissue | 1.30e-08 | 3 |
blood | 9.64e-07 | 15 |
haemolymphatic fluid | 9.64e-07 | 15 |
organism substance | 9.64e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.10e-23 | 1 |
extraosseous chondrosarcoma | 4.10e-23 | 1 |
myxoid chondrosarcoma | 4.10e-23 | 1 |
extraskeletal myxoid chondrosarcoma | 4.10e-23 | 1 |