FFCP PHASE1:Hg19::chr17:42092313..42092389,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84336 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28653 | |||
|TSSclassifier=strong | |||
|UniProt=Q96IK0 | |||
|association_with_transcript=0bp_to_ENST00000206380,NM_032376,uc002ieu.2_5end | |||
|cluster_id=chr17:42092313..42092389,- | |||
|coexpression_cluster_id=C895 | |||
|description=CAGE_peak_1_at_TMEM101_5end | |||
|id=chr17:42092313..42092389,- | |||
|ontology_enrichment_celltype=CL:0000055!2.33e-10!180;CL:0000183!1.03e-09!59;CL:0002321!2.01e-08!248;CL:0000220!2.65e-08!246;CL:0000222!4.40e-08!119;CL:0000192!6.54e-08!42;CL:0000514!6.54e-08!42;CL:0000187!1.03e-07!54;CL:0000548!1.50e-07!679;CL:0000004!1.50e-07!679;CL:0000255!1.50e-07!679;CL:0000680!1.83e-07!57;CL:0000056!1.83e-07!57;CL:0000355!1.83e-07!57;CL:0000012!2.83e-07!682;CL:0000066!4.33e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.69e-07;17!CL:0002518;3.69e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.66e-08,250;CL:0000222,3.85e-08,121;CL:0000192,1.15e-07,43;CL:0000514,1.15e-07,43;CL:0000187,1.62e-07,55;CL:0000680,2.80e-07,58;CL:0000056,2.80e-07,58;CL:0000355,2.80e-07,58;CL:0000066,3.79e-07,253;CL:1000497,4.29e-07,17;CL:0002518,4.29e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!2.26e-12!238;UBERON:0009142!2.26e-12!238;UBERON:0005256!8.28e-11!143;UBERON:0000490!2.55e-10!138;UBERON:0002100!4.98e-10!216;UBERON:0003914!3.96e-09!118;UBERON:0000481!5.01e-09!347;UBERON:0000486!1.95e-08!82;UBERON:0004290!1.50e-07!70;UBERON:0000914!2.56e-07!83;UBERON:0002329!2.56e-07!83;UBERON:0003077!2.56e-07!83;UBERON:0003059!2.56e-07!83;UBERON:0007282!2.56e-07!83;UBERON:0009618!2.56e-07!83;UBERON:0007285!2.56e-07!83;UBERON:0004119!3.03e-07!169;UBERON:0000925!3.03e-07!169;UBERON:0006595!3.03e-07!169;UBERON:0001134!7.49e-07!61;UBERON:0002036!7.49e-07!61;UBERON:0003082!7.49e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;6.66e-07;30!UBERON:0001008;6.66e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,2.47e-11,160;UBERON:0009142,2.47e-11,160;UBERON:0000490,5.42e-11,148;UBERON:0002100,2.19e-10,199;UBERON:0007503,1.16e-09,78;UBERON:0003914,2.94e-09,117;UBERON:0005256,3.48e-09,122;UBERON:0000486,2.79e-08,83;UBERON:0006554,8.54e-08,47;UBERON:0004119,1.15e-07,160;UBERON:0000925,1.15e-07,160;UBERON:0006595,1.15e-07,160;UBERON:0002329,2.17e-07,71;UBERON:0003059,2.17e-07,71;UBERON:0007282,2.17e-07,71;UBERON:0004290,2.17e-07,71;UBERON:0009618,2.17e-07,71;UBERON:0001008,2.76e-07,48;UBERON:0007524,3.76e-07,73;UBERON:0000483,4.80e-07,306;UBERON:0003077,5.43e-07,72;UBERON:0007285,5.43e-07,72;UBERON:0000119,5.54e-07,309 | |||
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| |||
|short_description=p1@TMEM101 | |||
}} |
Latest revision as of 19:18, 24 September 2015
Short description: | p1@TMEM101 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM101_5end |
Coexpression cluster: | C895_Mesenchymal_Renal_Alveolar_Fibroblast_Pericytes_Trabecular_Osteoblast |
Association with transcript: | 0bp_to_ENST00000206380, NM_032376, uc002ieu.2_5end |
EntrezGene: | TMEM101 |
HGNC: | 28653 |
UniProt: | Q96IK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.66e-08 | 250 |
mesodermal cell | 3.85e-08 | 121 |
smooth muscle cell | 1.15e-07 | 43 |
smooth muscle myoblast | 1.15e-07 | 43 |
muscle cell | 1.62e-07 | 55 |
muscle precursor cell | 2.80e-07 | 58 |
myoblast | 2.80e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.80e-07 | 58 |
epithelial cell | 3.79e-07 | 253 |
kidney cell | 4.29e-07 | 17 |
kidney epithelial cell | 4.29e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 2.47e-11 | 160 |
entire embryonic mesenchyme | 2.47e-11 | 160 |
unilaminar epithelium | 5.42e-11 | 148 |
trunk | 2.19e-10 | 199 |
epithelial vesicle | 1.16e-09 | 78 |
epithelial tube | 2.94e-09 | 117 |
trunk mesenchyme | 3.48e-09 | 122 |
multilaminar epithelium | 2.79e-08 | 83 |
urinary system structure | 8.54e-08 | 47 |
endoderm-derived structure | 1.15e-07 | 160 |
endoderm | 1.15e-07 | 160 |
presumptive endoderm | 1.15e-07 | 160 |
somite | 2.17e-07 | 71 |
presomitic mesoderm | 2.17e-07 | 71 |
presumptive segmental plate | 2.17e-07 | 71 |
dermomyotome | 2.17e-07 | 71 |
trunk paraxial mesoderm | 2.17e-07 | 71 |
renal system | 2.76e-07 | 48 |
dense mesenchyme tissue | 3.76e-07 | 73 |
epithelium | 4.80e-07 | 306 |
paraxial mesoderm | 5.43e-07 | 72 |
presumptive paraxial mesoderm | 5.43e-07 | 72 |
cell layer | 5.54e-07 | 309 |