FFCP PHASE1:Hg19::chr22:40441456..40441473,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23112 | |EntrezGene=23112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29190 | |HGNC=29190 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000402203_5end | |association_with_transcript=-4bp_to_ENST00000402203_5end | ||
|cluster_id=chr22:40441456..40441473,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_13_at_TNRC6B_5end | |description=CAGE_peak_13_at_TNRC6B_5end | ||
|id=chr22:40441456..40441473,+ | |id=chr22:40441456..40441473,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;7.15e-20;3!CL:0000037;2.38e-15;1!CL:0001024;2.38e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.05e-19,3;CL:0001024,2.06e-15,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.98e-16;1!UBERON:0001045;2.38e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.98e-16;1!UBERON:0001785;9.98e-16;1!UBERON:0002464;9.98e-16;1!UBERON:0004904;9.98e-16;1!UBERON:0001021;9.98e-16;1!UBERON:0000029;2.38e-15;1!UBERON:0001154;2.38e-15;1!UBERON:0001153;2.38e-15;1!UBERON:0009854;2.38e-15;1!UBERON:0003714;1.61e-08;2!UBERON:0005162;1.61e-08;2!UBERON:0000122;1.61e-08;2!UBERON:0000473;3.38e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.46e-16,1;UBERON:0001785,7.46e-16,1;UBERON:0002464,7.46e-16,1;UBERON:0004904,7.46e-16,1;UBERON:0001021,7.46e-16,1;UBERON:0003902,7.46e-16,1;UBERON:0005425,7.46e-16,1;UBERON:0000029,1.78e-15,1;UBERON:0001154,3.66e-15,1;UBERON:0001153,3.66e-15,1;UBERON:0001045,3.66e-15,1;UBERON:0003714,1.39e-08,2;UBERON:0005162,1.39e-08,2;UBERON:0000122,1.39e-08,2;UBERON:0000473,3.26e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.767658796194425,0,0,0,0,0.232401601740905,0,1.46800219667424,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0.853460445133014,0.800791974072025,1.14950487990897,0,0,0,0,0,2.64342657158052,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0,0,0.328875809207352,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.61958150995425,0,0,0,0,0,0.238490624305342,1.14398982156026,2.22874500797739,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0.854592569019785,0,0,0,0,0.0711418433484141,0.159426272728822,0.199579371432817,0.766021480529467,0,0,0,0,0,5.01268954180134,0.50787533340481,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0,1.10513566212459,0.251932747854276,0.306806047506464,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0.219385397153973,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0.364909578431332,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0,0.353024506766001,0.677942222341597,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.837847203816763,0,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0.2249738915515,0,0.121499113316049,0.335434687599266,0,0.209818352539992,0.211200673038813,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0.13223260174269,0.171086837884329,0,0.106787412567695,0,0,1.48849806543585,0,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0.218419276384028,0.169732529954025,0,0,0,0,0.315446980005013,0,0,0,0.256916900385838,0,0,0,0,0.207471757392654,0,2.85538840518309,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.591424344868181,0.0675375846183947,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0.345701962667338,0.171488009437418,0.475788130837822,0.131545547125698,0.236387681767936,0.111231401892069,0,0,0,0,0.215927591218621,0.47775168788705,0.571812353413251,0,0.348724276104376,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,1.1598144313382,0,0.233939463462106,0,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0.655678681511872,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.257831551894309,0.199882311849858,0.357107877211315,0,0.0802413666891683,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0.252332849670158,0.109265571963696,0,0,0,0,0.250707539292375,2.65225443763838,7.77095977452918,0,0.103432995861895,0.213233981900981,0.714193294391221,0.193766729508018,0.186224142887574,0.112131862580613,0.0636471582781649,0,0,0,0.606168477131288,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.767658796194425,0,0,0,0,0.232401601740905,0,1.46800219667424,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0.853460445133014,0.800791974072025,1.14950487990897,0,0,0,0,0,2.64342657158052,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0,0,0.328875809207352,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.61958150995425,0,0,0,0,0,0.238490624305342,1.14398982156026,2.22874500797739,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0.854592569019785,0,0,0,0,0.0711418433484141,0.159426272728822,0.199579371432817,0.766021480529467,0,0,0,0,0,5.01268954180134,0.50787533340481,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0,1.10513566212459,0.251932747854276,0.306806047506464,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0.219385397153973,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0.364909578431332,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0,0.353024506766001,0.677942222341597,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.837847203816763,0,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0.2249738915515,0,0.121499113316049,0.335434687599266,0,0.209818352539992,0.211200673038813,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0.13223260174269,0.171086837884329,0,0.106787412567695,0,0,1.48849806543585,0,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0.218419276384028,0.169732529954025,0,0,0,0,0.315446980005013,0,0,0,0.256916900385838,0,0,0,0,0.207471757392654,0,2.85538840518309,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.591424344868181,0.0675375846183947,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0.345701962667338,0.171488009437418,0.475788130837822,0.131545547125698,0.236387681767936,0.111231401892069,0,0,0,0,0.215927591218621,0.47775168788705,0.571812353413251,0,0.348724276104376,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,1.1598144313382,0,0.233939463462106,0,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0.655678681511872,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.257831551894309,0.199882311849858,0.357107877211315,0,0.0802413666891683,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0.252332849670158,0.109265571963696,0,0,0,0,0.250707539292375,2.65225443763838,7.77095977452918,0,0.103432995861895,0.213233981900981,0.714193294391221,0.193766729508018,0.186224142887574,0.112131862580613,0.0636471582781649,0,0,0,0.606168477131288,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p13@TNRC6B | |short_description=p13@TNRC6B | ||
}} | }} |
Latest revision as of 19:45, 24 September 2015
Short description: | p13@TNRC6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TNRC6B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -4bp_to_ENST00000402203_5end |
EntrezGene: | TNRC6B |
HGNC: | 29190 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.05e-19 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.06e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.46e-16 | 1 |
cranial nerve | 7.46e-16 | 1 |
nerve trunk | 7.46e-16 | 1 |
nerve connecting eye with brain | 7.46e-16 | 1 |
nerve | 7.46e-16 | 1 |
retinal neural layer | 7.46e-16 | 1 |
presumptive neural retina | 7.46e-16 | 1 |
lymph node | 1.78e-15 | 1 |
vermiform appendix | 3.66e-15 | 1 |
caecum | 3.66e-15 | 1 |
midgut | 3.66e-15 | 1 |
neural tissue | 1.39e-08 | 2 |
multi cell component structure | 1.39e-08 | 2 |
neuron projection bundle | 1.39e-08 | 2 |
testis | 3.26e-08 | 8 |