FFCP PHASE1:Hg19::chr4:1165260..1165276,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10417 | |EntrezGene=10417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |HGNC=11253 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H7I1 | |UniProt=Q9H7I1 | ||
|association_with_transcript=0bp_to_uc003gcm.1_5end | |association_with_transcript=0bp_to_uc003gcm.1_5end | ||
|cluster_id=chr4:1165260..1165276,- | |||
|coexpression_cluster_id=C574 | |||
|description=CAGE_peak_17_at_SPON2_5end | |description=CAGE_peak_17_at_SPON2_5end | ||
|id=chr4:1165260..1165276,- | |id=chr4:1165260..1165276,- | ||
|ontology_enrichment_celltype=CL:0000048!2.14e-13!430;CL:0000034!2.22e-13!444;CL:0000723!7.11e-13!436;CL:0002334!2.53e-12!12;CL:0000057!6.20e-10!75;CL:0002320!1.22e-09!365;CL:0000134!3.49e-09!358;CL:0000055!7.83e-09!180;CL:0002371!2.59e-08!591;CL:0000219!1.21e-07!390;CL:0002622!4.65e-07!3;CL:0000144!6.61e-07!625 | |ontology_enrichment_celltype=CL:0000048!2.14e-13!430;CL:0000034!2.22e-13!444;CL:0000723!7.11e-13!436;CL:0002334!2.53e-12!12;CL:0000057!6.20e-10!75;CL:0002320!1.22e-09!365;CL:0000134!3.49e-09!358;CL:0000055!7.83e-09!180;CL:0002371!2.59e-08!591;CL:0000219!1.21e-07!390;CL:0002622!4.65e-07!3;CL:0000144!6.61e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002622;1.13e-22;3!CL:0002600;4.28e-15;2!CL:0002615;6.46e-11;3!CL:0002504;2.26e-10;3!CL:1000279;2.26e-10;3!CL:1000280;2.26e-10;3!CL:0000136;2.80e-09;13!CL:0002599;7.27e-09;1!CL:0002568;2.12e-08;1!CL:0002581;2.12e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,5.63e-23,3;CL:0002600,6.14e-15,2;CL:0002615,7.14e-11,3;CL:0002504,1.70e-10,3;CL:1000279,1.70e-10,3;CL:1000280,1.70e-10,3;CL:0002599,7.01e-09,1;CL:0002568,1.37e-08,1;CL:0002581,1.59e-08,1;CL:0000136,4.13e-08,15;CL:0000048,1.07e-07,427;CL:0000723,1.60e-07,433;CL:0000192,2.43e-07,43;CL:0000514,2.43e-07,43;CL:0000034,2.67e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.99e-13!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.24e-10!6;UBERON:0002358!1.24e-10!6;UBERON:0003684!1.24e-10!6;UBERON:0001178!1.24e-10!6;UBERON:0004457!6.56e-10!12;UBERON:0000042!6.56e-10!12;UBERON:0004923!1.63e-09!57;UBERON:0002384!2.51e-09!375;UBERON:0000914!3.23e-08!83;UBERON:0002329!3.23e-08!83;UBERON:0003077!3.23e-08!83;UBERON:0003059!3.23e-08!83;UBERON:0007282!3.23e-08!83;UBERON:0009618!3.23e-08!83;UBERON:0007285!3.23e-08!83;UBERON:0002100!1.28e-07!216;UBERON:0004290!9.69e-07!70 | |ontology_enrichment_uberon=UBERON:0003688!1.24e-10!6;UBERON:0002358!1.24e-10!6;UBERON:0003684!1.24e-10!6;UBERON:0001178!1.24e-10!6;UBERON:0004457!6.56e-10!12;UBERON:0000042!6.56e-10!12;UBERON:0004923!1.63e-09!57;UBERON:0002384!2.51e-09!375;UBERON:0000914!3.23e-08!83;UBERON:0002329!3.23e-08!83;UBERON:0003077!3.23e-08!83;UBERON:0003059!3.23e-08!83;UBERON:0007282!3.23e-08!83;UBERON:0009618!3.23e-08!83;UBERON:0007285!3.23e-08!83;UBERON:0002100!1.28e-07!216;UBERON:0004290!9.69e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;5.68e-11;11!UBERON:0010147;5.68e-11;11!UBERON:0003937;4.55e-10;12!UBERON:0005399;4.55e-10;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,4.45e-11,11;UBERON:0010147,4.45e-11,11;UBERON:0009846,4.45e-11,11;UBERON:0003353,4.45e-11,11;UBERON:0004902,4.45e-11,11;UBERON:0003820,4.45e-11,11;UBERON:0009847,4.45e-11,11;UBERON:0003937,3.65e-10,12;UBERON:0005399,3.65e-10,12;UBERON:0000162,9.99e-09,14;UBERON:0001353,9.99e-09,14;UBERON:0000163,9.99e-09,14;UBERON:0006866,9.99e-09,14;UBERON:0000164,9.99e-09,14;UBERON:0000931,9.99e-09,14;UBERON:0004122,3.77e-08,15 | |||
|phase1_expression=0.908391896352783,1.71280419112787,0.422863212287913,2.00146596706261,3.5756887554183,0,5.06599756336621,0,0.261185628199839,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06976078313403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06400514659507,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0.234321431833797,1.24864030732128,0.570471821544449,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0.741800787835671,0.910161361938026,1.43723628363248,0,0,0,0,0.30648779579902,0.600952235626387,0,0,0,0,0.600182192168805,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,1.32969058292435,1.04007436911366,0,0,0,0.142977993658148,2.17048642156577,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.521301686808497,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0,0.561320188866147,0.384417447767103,0.511707249066704,0.321707842287215,1.48418066444991,0,0.355123450626254,0.164254312027618,0.519254429183621,0.581051892299796,0,0,0,1.60740227430449,2.36718518408732,7.47409165268718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,1.02359116524534,0.855877976067841,0,0,0.899362287916574,1.37268514868027,1.53156123049392,0,0,0,3.90106991271672,0,0,0.545999645631943,4.24216295861138,0,0,0,0,1.15755106853338,1.31178950409327,0,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0.422215270595328,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.604923695052956,0,0,0.318593534327405,0.899606224327209,0,0.829412415681711,0.265841714557995,1.5652351854352,0.300515217994437,0.761610424337591,0,0.363697318405119,0.107410557042488,0.928067519756987,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1437183414724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.908391896352783,1.71280419112787,0.422863212287913,2.00146596706261,3.5756887554183,0,5.06599756336621,0,0.261185628199839,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06976078313403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06400514659507,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0.234321431833797,1.24864030732128,0.570471821544449,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0.741800787835671,0.910161361938026,1.43723628363248,0,0,0,0,0.30648779579902,0.600952235626387,0,0,0,0,0.600182192168805,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,1.32969058292435,1.04007436911366,0,0,0,0.142977993658148,2.17048642156577,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.521301686808497,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0,0.561320188866147,0.384417447767103,0.511707249066704,0.321707842287215,1.48418066444991,0,0.355123450626254,0.164254312027618,0.519254429183621,0.581051892299796,0,0,0,1.60740227430449,2.36718518408732,7.47409165268718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,1.02359116524534,0.855877976067841,0,0,0.899362287916574,1.37268514868027,1.53156123049392,0,0,0,3.90106991271672,0,0,0.545999645631943,4.24216295861138,0,0,0,0,1.15755106853338,1.31178950409327,0,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0.422215270595328,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.604923695052956,0,0,0.318593534327405,0.899606224327209,0,0.829412415681711,0.265841714557995,1.5652351854352,0.300515217994437,0.761610424337591,0,0.363697318405119,0.107410557042488,0.928067519756987,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1437183414724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@SPON2 | |short_description=p17@SPON2 | ||
}} | }} |
Latest revision as of 20:26, 24 September 2015
Short description: | p17@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SPON2_5end |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | 0bp_to_uc003gcm.1_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | Q9H7I1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 5.63e-23 | 3 |
smooth muscle cell of trachea | 6.14e-15 | 2 |
adipocyte of omentum tissue | 7.14e-11 | 3 |
enteric smooth muscle cell | 1.70e-10 | 3 |
smooth muscle cell of large intestine | 1.70e-10 | 3 |
smooth muscle cell of colon | 1.70e-10 | 3 |
smooth muscle cell of the esophagus | 7.01e-09 | 1 |
mesenchymal stem cell of Wharton's jelly | 1.37e-08 | 1 |
perirenal preadipocyte | 1.59e-08 | 1 |
fat cell | 4.13e-08 | 15 |
multi fate stem cell | 1.07e-07 | 427 |
somatic stem cell | 1.60e-07 | 433 |
smooth muscle cell | 2.43e-07 | 43 |
smooth muscle myoblast | 2.43e-07 | 43 |
stem cell | 2.67e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 4.45e-11 | 11 |
male accessory sex gland | 4.45e-11 | 11 |
embryonic cloacal epithelium | 4.45e-11 | 11 |
epithelium of hindgut | 4.45e-11 | 11 |
urogenital sinus epithelium | 4.45e-11 | 11 |
prostate bud | 4.45e-11 | 11 |
prostate field | 4.45e-11 | 11 |
sex gland | 3.65e-10 | 12 |
male reproductive gland | 3.65e-10 | 12 |
cloaca | 9.99e-09 | 14 |
anal region | 9.99e-09 | 14 |
embryonic cloaca | 9.99e-09 | 14 |
terminal part of digestive tract | 9.99e-09 | 14 |
primitive urogenital sinus | 9.99e-09 | 14 |
proctodeum | 9.99e-09 | 14 |
genitourinary system | 3.77e-08 | 15 |