FFCP PHASE1:Hg19::chr14:61747897..61747906,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:61747897..61747906,-
|short_description=p10@TMEM30B
|description=CAGE_peak_10_at_TMEM30B_5end
|association_with_transcript=52bp_to_ENST00000355702_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=161291 | |EntrezGene=161291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27254 | |HGNC=27254 | ||
|TSSclassifier=strong | |||
|UniProt=Q3MIR4 | |UniProt=Q3MIR4 | ||
|association_with_transcript=52bp_to_ENST00000355702_5end | |||
|cluster_id=chr14:61747897..61747906,- | |||
|description=CAGE_peak_10_at_TMEM30B_5end | |||
|id=chr14:61747897..61747906,- | |||
|ontology_enrichment_celltype=CL:0002076!6.26e-11!43;CL:0002251!9.59e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000082;7.08e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,5.09e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.22e-09;2!UBERON:0009847;4.64e-07;3!UBERON:0003353;4.64e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!5.53e-08!14;DOID:305!8.56e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.84e-11;14!DOID:1324;3.80e-10;15!DOID:0050615;1.79e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.27e-11,14;DOID:1324,2.48e-10,15;DOID:0050615,1.20e-09,16;DOID:305,2.20e-09,106;DOID:0050687,8.07e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.84e-17!169;UBERON:0000925!2.84e-17!169;UBERON:0006595!2.84e-17!169;UBERON:0001007!9.17e-14!155;UBERON:0001555!9.17e-14!155;UBERON:0007026!9.17e-14!155;UBERON:0004921!2.45e-11!129;UBERON:0004185!2.45e-11!129;UBERON:0000077!1.58e-10!130;UBERON:0007023!2.53e-10!115;UBERON:0001004!2.55e-10!72;UBERON:0000464!9.36e-10!104;UBERON:0000161!2.93e-09!35;UBERON:0005178!6.01e-09!34;UBERON:0002224!6.01e-09!34;UBERON:0005181!1.67e-08!35;UBERON:0000466!5.63e-08!126;UBERON:0000065!1.08e-07!53;UBERON:0005911!1.84e-07!82;UBERON:0000922!3.35e-07!612;UBERON:0001041!3.57e-07!98;UBERON:0005153!4.10e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000058;1.21e-10;10!UBERON:0001829;1.22e-09;2!UBERON:0005181;6.04e-08;35!UBERON:0004802;7.08e-08;19!UBERON:0000115;7.08e-08;19!UBERON:0005178;9.48e-08;34!UBERON:0002224;9.48e-08;34!UBERON:0001041;1.17e-07;14!UBERON:0000072;4.70e-07;37!UBERON:0001044;4.97e-07;6!UBERON:0003293;4.97e-07;6!UBERON:0003294;4.97e-07;6!UBERON:0010047;4.97e-07;6!UBERON:0003408;4.97e-07;6!UBERON:0000167;4.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,5.20e-12,87;UBERON:0004921,3.11e-11,118;UBERON:0004119,3.48e-11,160;UBERON:0000925,3.48e-11,160;UBERON:0006595,3.48e-11,160;UBERON:0001007,1.76e-10,145;UBERON:0001555,1.76e-10,145;UBERON:0007026,1.76e-10,145;UBERON:0001829,1.07e-09,2;UBERON:0000072,4.37e-09,47;UBERON:0005178,4.72e-09,34;UBERON:0002224,4.72e-09,34;UBERON:0005181,9.49e-09,35;UBERON:0001004,1.78e-08,74;UBERON:0005153,3.56e-08,37;UBERON:0004802,5.09e-08,19;UBERON:0000115,5.09e-08,19;UBERON:0008947,6.18e-08,38;UBERON:0003258,6.18e-08,38;UBERON:0000065,1.23e-07,54;UBERON:0001044,5.38e-07,6;UBERON:0003293,5.38e-07,6;UBERON:0003294,5.38e-07,6;UBERON:0010047,5.38e-07,6;UBERON:0000167,5.38e-07,6;UBERON:0002048,7.75e-07,22;UBERON:0000117,7.75e-07,22;UBERON:0000171,7.75e-07,22;UBERON:0000170,7.75e-07,22;UBERON:0005597,7.75e-07,22;UBERON:0000118,7.75e-07,22 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0.74259811776028,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.109750285408626,0,0.402115889646523,0.277765335475589,0,0,0,0,0.352226082707465,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0.447792613514241,0.290633938513962,0,0,0,0.621984346622316,0.432359860250884,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.431255149719035,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0,0.178428988797162,0.157702415033935,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.647142602455851,0.106727557803444,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0.40101294060657,0.552485933615378,0,0,0.262248829918848,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0.844430541190656,1.31717957183961,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0.282431402330337,0,1.68471475667626,0.886860307073351,0.459446800413919,0,0.764637207142375,0,0.476463550915578,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0.23874448473769,0.296964680832639,0.614321404198464,0.994147647766298,0,0,0,0,0.19924798825107,0,0.503865495708552,0,0,0.311039587661807,1.16828856491525,0.716084698702437,0,0.295930216910801,0,0,0,0,0,0.7812832832557,1.04951999995435,0,1.4793148277115,1.77977555204936,1.89110145414349,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0.83654246567162,0.461701551022782,0,0,0,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0.141353071433941,0,0,0.530745387020035,0.611030144933625,0,0,0,0,0,0,0,0.391329237864179,0,0.394584402849391,1.20990716048664,0,0.442306057399416,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,3.62571870433197,1.74118413160805,1.57254001417827,3.26773461696071,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0,0.586654148204409,0.160317640503067,0.640358984218058,0,2.01726584015748,0,0,0,0,1.64985824231757,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,1.99679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,2.30298236783334,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0.129282956361551,0,0,1.40963004463334,0.320362237703084,0,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.294443155503077,0.707818340086442,0.366857197043358,1.03973099535304,0,0,0,0.451261970095544,0,1.56302802246618,0,0,1.47856086217045,0,0,0,0,0.546974809018219,1.64477330057155,0,0,1.78867398695433,0.535701835878287,0.336283722218824,1.82089681270989,0.682986574053893,0.0887023701626388,0,0,0,0,0,4.6717188794669,1.02041020705668,0.314231179832004,0.280272163313789,0,0,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,1.29068207646083,0,0,1.27016115057279,0.68732060563215,0,0,1.34226518157351,0.98150233615243,0.975343399858155,0.647428837187895,0.205325613712494,1.1598144313382,0.485710993059139,2.57333409808316,0,0.118920090777569,0.22589216407792,0,2.71733118420012,0.154348316215889,0.218559560503957,0.470317296361523,0,0,0.588925401344836,0.297046400327086,1.2679671827502,0,0.0939839179798536,0,0,0.178553938605658,0,1.44434460040503,1.46067277649303,1.37618785021362,0.286679166302903,0,0,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394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| ||
|short_description=p10@TMEM30B | |||
}} | }} |
Latest revision as of 21:26, 24 September 2015
Short description: | p10@TMEM30B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TMEM30B_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000355702_5end |
EntrezGene: | TMEM30B |
HGNC: | 27254 |
UniProt: | Q3MIR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 5.09e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
foregut | 5.20e-12 | 87 |
subdivision of digestive tract | 3.11e-11 | 118 |
endoderm-derived structure | 3.48e-11 | 160 |
endoderm | 3.48e-11 | 160 |
presumptive endoderm | 3.48e-11 | 160 |
digestive system | 1.76e-10 | 145 |
digestive tract | 1.76e-10 | 145 |
primitive gut | 1.76e-10 | 145 |
major salivary gland | 1.07e-09 | 2 |
segment of respiratory tract | 4.37e-09 | 47 |
thoracic cavity element | 4.72e-09 | 34 |
thoracic cavity | 4.72e-09 | 34 |
thoracic segment organ | 9.49e-09 | 35 |
respiratory system | 1.78e-08 | 74 |
epithelial bud | 3.56e-08 | 37 |
respiratory tract epithelium | 5.09e-08 | 19 |
lung epithelium | 5.09e-08 | 19 |
respiratory primordium | 6.18e-08 | 38 |
endoderm of foregut | 6.18e-08 | 38 |
respiratory tract | 1.23e-07 | 54 |
saliva-secreting gland | 5.38e-07 | 6 |
gland of oral region | 5.38e-07 | 6 |
gland of foregut | 5.38e-07 | 6 |
oral gland | 5.38e-07 | 6 |
oral cavity | 5.38e-07 | 6 |
lung | 7.75e-07 | 22 |
respiratory tube | 7.75e-07 | 22 |
respiration organ | 7.75e-07 | 22 |
pair of lungs | 7.75e-07 | 22 |
lung primordium | 7.75e-07 | 22 |
lung bud | 7.75e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.27e-11 | 14 |
lung cancer | 2.48e-10 | 15 |
respiratory system cancer | 1.20e-09 | 16 |
carcinoma | 2.20e-09 | 106 |
cell type cancer | 8.07e-08 | 143 |