FFCP PHASE1:Hg19::chr5:137610161..137610174,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2676 | |EntrezGene=2676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4245 | |HGNC=4245 | ||
|TSSclassifier=strong | |||
|UniProt=O60609 | |UniProt=O60609 | ||
|association_with_transcript=78bp_to_NM_001496,uc003lcn.2,uc003lco.2_5end | |association_with_transcript=78bp_to_NM_001496,uc003lcn.2,uc003lco.2_5end | ||
|cluster_id=chr5:137610161..137610174,- | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_3_at_GFRA3_5end | |description=CAGE_peak_3_at_GFRA3_5end | ||
|id=chr5:137610161..137610174,- | |id=chr5:137610161..137610174,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.56e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;7.88e-13;1!DOID:1357;7.88e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,7.89e-13,1;DOID:1357,7.89e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.27e-17!115;UBERON:0003135!2.35e-12!11;UBERON:0003101!2.52e-08!22;UBERON:0000079!2.52e-08!22;UBERON:0006947!7.21e-08!3;UBERON:0004054!7.21e-08!3;UBERON:0000473!5.14e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!2.27e-17!115;UBERON:0003135!2.35e-12!11;UBERON:0003101!2.52e-08!22;UBERON:0000079!2.52e-08!22;UBERON:0006947!7.21e-08!3;UBERON:0004054!7.21e-08!3;UBERON:0000473!5.14e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;6.80e-17;49!UBERON:0001764;7.88e-13;1!UBERON:0001825;7.88e-13;1!UBERON:0002426;9.92e-13;1!UBERON:0003831;9.92e-13;1!UBERON:0003898;9.92e-13;1!UBERON:0004830;9.92e-13;1!UBERON:0003830;9.92e-13;1!UBERON:0005175;9.92e-13;1!UBERON:0001774;9.92e-13;1!UBERON:0001103;9.92e-13;1!UBERON:0007029;1.40e-12;1!UBERON:0005795;3.08e-12;1!UBERON:0006955;4.55e-07;2!UBERON:0004801;4.55e-07;2!UBERON:0005090;5.41e-07;2!UBERON:0001630;5.41e-07;2!UBERON:0003127;9.53e-07;2!UBERON:0000341;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,7.89e-13,1;UBERON:0001825,7.89e-13,1;UBERON:0002426,9.92e-13,1;UBERON:0003831,9.92e-13,1;UBERON:0003898,9.92e-13,1;UBERON:0004830,9.92e-13,1;UBERON:0003830,9.92e-13,1;UBERON:0005175,9.92e-13,1;UBERON:0001774,9.92e-13,1;UBERON:0001103,9.92e-13,1;UBERON:0010084,9.92e-13,1;UBERON:0007029,1.25e-12,1;UBERON:0006955,4.56e-07,2;UBERON:0004801,4.56e-07,2;UBERON:0005090,5.41e-07,2;UBERON:0001630,5.41e-07,2;UBERON:0003127,7.61e-07,2;UBERON:0000341,8.06e-07,2 | |||
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| ||
|short_description=p3@GFRA3 | |short_description=p3@GFRA3 | ||
}} | }} |
Latest revision as of 22:06, 24 September 2015
Short description: | p3@GFRA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GFRA3_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 78bp_to_NM_001496, uc003lcn.2, uc003lco.2_5end |
EntrezGene: | GFRA3 |
HGNC: | 4245 |
UniProt: | O60609 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 7.89e-13 | 1 |
paranasal sinus | 7.89e-13 | 1 |
chest muscle | 9.92e-13 | 1 |
respiratory system muscle | 9.92e-13 | 1 |
skeletal muscle of trunk | 9.92e-13 | 1 |
respiratory system skeletal muscle | 9.92e-13 | 1 |
thoracic segment muscle | 9.92e-13 | 1 |
chest organ | 9.92e-13 | 1 |
muscle of trunk | 9.92e-13 | 1 |
diaphragm | 9.92e-13 | 1 |
future diaphragm | 9.92e-13 | 1 |
surface | 1.25e-12 | 1 |
uterine epithelium | 4.56e-07 | 2 |
cervix epithelium | 4.56e-07 | 2 |
muscle structure | 5.41e-07 | 2 |
muscle organ | 5.41e-07 | 2 |
open tracheal system trachea | 7.61e-07 | 2 |
throat | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 7.89e-13 | 1 |
maxillary sinus cancer | 7.89e-13 | 1 |