FFCP PHASE1:Hg19::chr19:8117881..8117919,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6370 | |EntrezGene=6370 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10624 | |HGNC=10624 | ||
|TSSclassifier=strong | |||
|UniProt=O15444 | |UniProt=O15444 | ||
|association_with_transcript=0bp_to_ENST00000390669,uc002mjd.2,uc010dvy.1_5end | |association_with_transcript=0bp_to_ENST00000390669,uc002mjd.2,uc010dvy.1_5end | ||
|cluster_id=chr19:8117881..8117919,+ | |||
|coexpression_cluster_id=C2507 | |coexpression_cluster_id=C2507 | ||
|description=CAGE_peak_5_at_CCL25_5end | |description=CAGE_peak_5_at_CCL25_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!3.61e-15!5 | |ontology_enrichment_celltype=CL:0002322!3.61e-15!5 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.26e-19!4;UBERON:0005058!3.26e-19!4;UBERON:0009113!3.26e-19!4;UBERON:0003295!3.26e-19!4;UBERON:0005562!3.26e-19!4;UBERON:0003351!3.77e-13!6;UBERON:0002108!1.52e-11!14;UBERON:0004177!2.07e-11!7;UBERON:0000160!1.01e-10!27;UBERON:0005409!2.09e-08!35;UBERON:0000974!2.92e-08!10;UBERON:0003408!2.92e-08!10;UBERON:0001042!2.92e-08!10;UBERON:0009145!2.92e-08!10;UBERON:0006562!1.37e-07!11;UBERON:0009722!1.37e-07!11;UBERON:0007690!1.37e-07!11 | |ontology_enrichment_uberon=UBERON:0002370!3.26e-19!4;UBERON:0005058!3.26e-19!4;UBERON:0009113!3.26e-19!4;UBERON:0003295!3.26e-19!4;UBERON:0005562!3.26e-19!4;UBERON:0003351!3.77e-13!6;UBERON:0002108!1.52e-11!14;UBERON:0004177!2.07e-11!7;UBERON:0000160!1.01e-10!27;UBERON:0005409!2.09e-08!35;UBERON:0000974!2.92e-08!10;UBERON:0003408!2.92e-08!10;UBERON:0001042!2.92e-08!10;UBERON:0009145!2.92e-08!10;UBERON:0006562!1.37e-07!11;UBERON:0009722!1.37e-07!11;UBERON:0007690!1.37e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;4.05e-40;4!UBERON:0002370;4.90e-26;2!UBERON:0005058;4.90e-26;2!UBERON:0009113;4.90e-26;2!UBERON:0000160;5.09e-12;17!UBERON:0004177;2.80e-11;5!UBERON:0005057;2.80e-11;5!UBERON:0005409;1.22e-09;22!UBERON:0001871;1.96e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0002108;4.05e-40;4!UBERON:0002370;4.90e-26;2!UBERON:0005058;4.90e-26;2!UBERON:0009113;4.90e-26;2!UBERON:0000160;5.09e-12;17!UBERON:0004177;2.80e-11;5!UBERON:0005057;2.80e-11;5!UBERON:0005409;1.22e-09;22!UBERON:0001871;1.96e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,4.05e-40,4;UBERON:0002370,8.82e-14,4;UBERON:0005058,8.82e-14,4;UBERON:0009113,8.82e-14,4;UBERON:0003295,8.82e-14,4;UBERON:0005562,8.82e-14,4;UBERON:0000160,5.09e-12,17;UBERON:0003351,1.22e-09,6;UBERON:0005409,1.20e-08,25;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7;UBERON:0001871,2.03e-08,6 | |||
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|short_description=p5@CCL25 | |short_description=p5@CCL25 | ||
}} | }} |
Latest revision as of 23:14, 24 September 2015
Short description: | p5@CCL25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCL25_5end |
Coexpression cluster: | C2507_thymus_small_colon_duodenum_temporal_vein_throat |
Association with transcript: | 0bp_to_ENST00000390669, uc002mjd.2, uc010dvy.1_5end |
EntrezGene: | CCL25 |
HGNC: | 10624 |
UniProt: | O15444 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 4.05e-40 | 4 |
thymus | 8.82e-14 | 4 |
hemolymphoid system gland | 8.82e-14 | 4 |
thymic region | 8.82e-14 | 4 |
pharyngeal gland | 8.82e-14 | 4 |
thymus primordium | 8.82e-14 | 4 |
intestine | 5.09e-12 | 17 |
pharyngeal epithelium | 1.22e-09 | 6 |
gastrointestinal system | 1.20e-08 | 25 |
hemopoietic organ | 1.89e-08 | 7 |
immune organ | 1.89e-08 | 7 |
temporal lobe | 2.03e-08 | 6 |