FFCP PHASE1:Hg19::chr2:223289046..223289056,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:223289046..223289056,+
|short_description=p12@SGPP2
|description=CAGE_peak_12_at_SGPP2_5end
|association_with_transcript=-179bp_to_ENST00000321276_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=130367 | |EntrezGene=130367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19953 | |HGNC=19953 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWX5 | |UniProt=Q8IWX5 | ||
|association_with_transcript=-179bp_to_ENST00000321276_5end | |||
|cluster_id=chr2:223289046..223289056,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_12_at_SGPP2_5end | |||
|id=chr2:223289046..223289056,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.14e-16!42;CL:0000860!6.75e-15!45;CL:0002194!2.73e-12!63;CL:0000576!2.73e-12!63;CL:0000040!2.73e-12!63;CL:0000559!2.73e-12!63;CL:0002009!1.02e-11!65;CL:0000839!1.97e-10!70;CL:0000557!3.38e-10!71;CL:0000766!3.57e-10!76;CL:0002087!1.64e-08!119;CL:0002031!3.05e-07!124;CL:0002619!3.10e-07!3;CL:0000738!9.25e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.09e-67;33!CL:0002057;1.09e-67;33!CL:0000473;8.53e-49;39!CL:0000234;8.53e-49;39!CL:0000576;1.91e-27;48!CL:0000766;2.16e-20;69!CL:0002087;8.56e-11;104!CL:0000763;1.39e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.43e-57,42;CL:0002057,2.43e-57,42;CL:0000473,5.97e-50,48;CL:0000234,5.97e-50,48;CL:0002194,1.35e-39,59;CL:0000576,1.35e-39,59;CL:0000040,1.35e-39,59;CL:0000559,1.35e-39,59;CL:0002009,2.94e-38,61;CL:0000839,2.90e-35,66;CL:0000557,1.02e-34,67;CL:0000766,3.28e-32,72;CL:0000763,6.30e-21,108;CL:0000049,6.30e-21,108;CL:0002087,1.53e-19,115;CL:0002031,1.19e-18,120;CL:0000738,3.10e-16,136;CL:0002032,2.09e-13,161;CL:0000837,2.09e-13,161;CL:0000037,9.17e-13,168;CL:0000988,5.19e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.09e-41;42!CL:0000049;8.54e-07;108 | |||
|ontology_enrichment_disease=DOID:299!4.71e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.31e-13!57;UBERON:0005068!8.31e-13!57;UBERON:0006241!8.31e-13!57;UBERON:0007135!8.31e-13!57;UBERON:0002780!1.00e-11!41;UBERON:0001890!1.00e-11!41;UBERON:0006240!1.00e-11!41;UBERON:0002020!1.93e-11!34;UBERON:0003528!1.93e-11!34;UBERON:0003080!2.44e-11!42;UBERON:0002616!6.22e-11!59;UBERON:0007023!4.02e-10!115;UBERON:0001893!7.22e-10!34;UBERON:0000955!2.55e-09!69;UBERON:0006238!2.55e-09!69;UBERON:0001869!2.59e-09!32;UBERON:0002791!7.68e-09!33;UBERON:0002371!2.27e-08!80;UBERON:0001017!8.42e-08!82;UBERON:0002619!1.31e-07!22;UBERON:0001474!2.22e-07!86;UBERON:0002308!2.33e-07!9;UBERON:0000125!2.33e-07!9;UBERON:0003075!2.35e-07!86;UBERON:0007284!2.35e-07!86;UBERON:0002390!3.31e-07!102;UBERON:0003061!3.31e-07!102;UBERON:0005743!3.53e-07!86;UBERON:0000062!4.20e-07!511;UBERON:0001950!5.97e-07!20;UBERON:0000988!7.03e-07!3;UBERON:0002346!8.90e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.94e-30,76;UBERON:0001474,4.25e-28,82;UBERON:0004765,1.86e-25,90;UBERON:0002405,1.39e-24,93;UBERON:0002390,3.05e-23,98;UBERON:0003061,3.05e-23,98;UBERON:0001434,9.65e-23,100;UBERON:0002193,6.30e-21,108;UBERON:0002204,7.48e-13,167;UBERON:0003081,3.32e-10,203 | |||
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| ||
|short_description=p12@SGPP2 | |||
}} | }} |
Latest revision as of 23:31, 24 September 2015
Short description: | p12@SGPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SGPP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -179bp_to_ENST00000321276_5end |
EntrezGene: | SGPP2 |
HGNC: | 19953 |
UniProt: | Q8IWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.43e-57 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.43e-57 | 42 |
defensive cell | 5.97e-50 | 48 |
phagocyte | 5.97e-50 | 48 |
monopoietic cell | 1.35e-39 | 59 |
monocyte | 1.35e-39 | 59 |
monoblast | 1.35e-39 | 59 |
promonocyte | 1.35e-39 | 59 |
macrophage dendritic cell progenitor | 2.94e-38 | 61 |
myeloid lineage restricted progenitor cell | 2.90e-35 | 66 |
granulocyte monocyte progenitor cell | 1.02e-34 | 67 |
myeloid leukocyte | 3.28e-32 | 72 |
myeloid cell | 6.30e-21 | 108 |
common myeloid progenitor | 6.30e-21 | 108 |
nongranular leukocyte | 1.53e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.19e-18 | 120 |
leukocyte | 3.10e-16 | 136 |
hematopoietic oligopotent progenitor cell | 2.09e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-13 | 161 |
hematopoietic stem cell | 9.17e-13 | 168 |
hematopoietic cell | 5.19e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.94e-30 | 76 |
bone element | 4.25e-28 | 82 |
skeletal element | 1.86e-25 | 90 |
immune system | 1.39e-24 | 93 |
hematopoietic system | 3.05e-23 | 98 |
blood island | 3.05e-23 | 98 |
skeletal system | 9.65e-23 | 100 |
hemolymphoid system | 6.30e-21 | 108 |
musculoskeletal system | 7.48e-13 | 167 |
lateral plate mesoderm | 3.32e-10 | 203 |