FFCP PHASE1:Hg19::chr5:138210977..138210999,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:138210977..138210999,-
|short_description=p2@LRRTM2
|description=CAGE_peak_2_at_LRRTM2_5end
|association_with_transcript=0bp_to_ENST00000274711,ENST0000052...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26045 | |EntrezGene=26045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19409 | |HGNC=19409 | ||
|TSSclassifier=strong | |||
|UniProt=O43300,E5RHE5 | |UniProt=O43300,E5RHE5 | ||
|association_with_transcript=0bp_to_ENST00000274711,ENST00000521094_5end | |||
|cluster_id=chr5:138210977..138210999,- | |||
|coexpression_cluster_id=C257 | |||
|description=CAGE_peak_2_at_LRRTM2_5end | |||
|id=chr5:138210977..138210999,- | |||
|ontology_enrichment_celltype=CL:0002319!5.30e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.22e-07;3!CL:0002319;5.42e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.90e-08,8;CL:0002605,3.37e-07,3;CL:0002319,5.18e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.57e-20;82!UBERON:0006215;1.36e-07;3!UBERON:0006241;1.77e-07;3!UBERON:0003057;1.77e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.61e-65;34!UBERON:0003528;9.74e-65;34!UBERON:0002020;9.74e-65;34!UBERON:0001869;1.07e-64;32!UBERON:0002791;2.54e-64;32!UBERON:0002780;1.46e-58;41!UBERON:0001890;1.46e-58;41!UBERON:0000956;1.19e-55;25!UBERON:0000203;1.19e-55;25!UBERON:0000073;8.04e-54;53!UBERON:0002616;8.04e-54;53!UBERON:0002619;4.46e-50;22!UBERON:0001950;1.24e-45;20!UBERON:0001017;2.95e-41;75!UBERON:0000955;2.50e-39;68!UBERON:0001016;9.69e-36;83!UBERON:0002420;4.52e-21;9!UBERON:0007245;4.52e-21;9!UBERON:0010009;4.52e-21;9!UBERON:0010011;4.52e-21;9!UBERON:0000454;4.52e-21;9!UBERON:0000125;5.22e-21;9!UBERON:0002308;5.22e-21;9!UBERON:0009663;7.58e-17;7!UBERON:0004732;4.66e-16;13!UBERON:0000200;9.77e-16;6!UBERON:0004733;2.97e-14;12!UBERON:0002028;2.97e-14;12!UBERON:0002298;1.06e-13;6!UBERON:0011216;1.28e-13;132!UBERON:0001872;2.00e-13;5!UBERON:0002021;2.96e-13;5!UBERON:0001871;7.08e-13;6!UBERON:0007023;1.18e-12;114!UBERON:0000349;1.21e-12;5!UBERON:0002784;3.25e-11;4!UBERON:0000369;7.28e-11;4!UBERON:0002435;7.28e-11;4!UBERON:0000204;7.28e-11;4!UBERON:0001894;1.65e-09;7!UBERON:0002680;6.13e-09;9!UBERON:0001895;6.13e-09;9!UBERON:0001870;8.04e-09;3!UBERON:0005383;1.76e-08;3!UBERON:0005382;1.76e-08;3!UBERON:0010314;3.06e-08;132!UBERON:0000988;7.43e-08;3!UBERON:0001896;1.63e-07;3!UBERON:0005290;1.63e-07;3!UBERON:0002240;1.77e-07;3!UBERON:0005174;1.77e-07;3!UBERON:0001137;1.77e-07;3!UBERON:0001905;9.43e-07;2!UBERON:0002757;9.43e-07;2!UBERON:0010134;9.43e-07;2!UBERON:0005408;9.43e-07;2!UBERON:0001899;9.43e-07;2!UBERON:0004121;9.49e-07;165 | |||
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| ||
|short_description=p2@LRRTM2 | |||
}} | }} |
Latest revision as of 23:38, 24 September 2015
Short description: | p2@LRRTM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRTM2_5end |
Coexpression cluster: | C257_pineal_insula_frontal_occipital_temporal_medial_paracentral |
Association with transcript: | 0bp_to_ENST00000274711, ENST00000521094_5end |
EntrezGene: | LRRTM2 |
HGNC: | 19409 |
UniProt: | O43300E5RHE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.90e-08 | 8 |
astrocyte of the cerebral cortex | 3.37e-07 | 3 |
neural cell | 5.18e-07 | 25 |