FFCP PHASE1:Hg19::chr11:111412053..111412082,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=143903 | |EntrezGene=143903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29471 | |HGNC=29471 | ||
|TSSclassifier=strong | |||
|UniProt=E9PK64 | |UniProt=E9PK64 | ||
|association_with_transcript=0bp_to_ENST00000530962,uc010rwh.1_5end | |association_with_transcript=0bp_to_ENST00000530962,uc010rwh.1_5end | ||
|cluster_id=chr11:111412053..111412082,+ | |||
|description=CAGE_peak_2_at_LAYN_5end | |description=CAGE_peak_2_at_LAYN_5end | ||
|id=chr11:111412053..111412082,+ | |id=chr11:111412053..111412082,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.48e-34!180;CL:0000057!2.73e-24!75;CL:0002620!5.62e-12!23;CL:0000680!1.33e-10!57;CL:0000056!1.33e-10!57;CL:0000355!1.33e-10!57;CL:0000192!4.19e-10!42;CL:0000514!4.19e-10!42;CL:0000187!5.78e-10!54;CL:0000183!1.18e-08!59;CL:0000222!4.16e-08!119;CL:0000393!1.07e-07!60;CL:0000211!1.07e-07!60;CL:0000144!1.60e-07!625 | |ontology_enrichment_celltype=CL:0000055!2.48e-34!180;CL:0000057!2.73e-24!75;CL:0002620!5.62e-12!23;CL:0000680!1.33e-10!57;CL:0000056!1.33e-10!57;CL:0000355!1.33e-10!57;CL:0000192!4.19e-10!42;CL:0000514!4.19e-10!42;CL:0000187!5.78e-10!54;CL:0000183!1.18e-08!59;CL:0000222!4.16e-08!119;CL:0000393!1.07e-07!60;CL:0000211!1.07e-07!60;CL:0000144!1.60e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.79e-11;23!CL:0000349;1.28e-07;19!CL:0000057;4.47e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.95e-14,76;CL:0002620,2.81e-11,23;CL:0000349,1.80e-07,19;CL:0000048,2.41e-07,427;CL:0000723,5.35e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;4.98e-10;5!DOID:450;4.98e-10;5!DOID:66;4.98e-10;5!DOID:423;4.98e-10;5!DOID:0080000;4.98e-10;5!DOID:11722;4.98e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.67e-10,5;DOID:450,1.67e-10,5;DOID:66,1.67e-10,5;DOID:423,1.67e-10,5;DOID:0080000,1.67e-10,5;DOID:11722,1.67e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.69e-16!83;UBERON:0002329!1.69e-16!83;UBERON:0003077!1.69e-16!83;UBERON:0003059!1.69e-16!83;UBERON:0007282!1.69e-16!83;UBERON:0009618!1.69e-16!83;UBERON:0007285!1.69e-16!83;UBERON:0004290!5.81e-12!70;UBERON:0000475!2.07e-11!365;UBERON:0000486!1.45e-10!82;UBERON:0005256!1.53e-09!143;UBERON:0002199!3.23e-09!45;UBERON:0002416!3.23e-09!45;UBERON:0002385!3.27e-09!63;UBERON:0001015!3.27e-09!63;UBERON:0000383!3.27e-09!63;UBERON:0002097!4.93e-09!40;UBERON:0001134!5.33e-09!61;UBERON:0002036!5.33e-09!61;UBERON:0003082!5.33e-09!61;UBERON:0003102!7.48e-08!95 | |ontology_enrichment_uberon=UBERON:0000914!1.69e-16!83;UBERON:0002329!1.69e-16!83;UBERON:0003077!1.69e-16!83;UBERON:0003059!1.69e-16!83;UBERON:0007282!1.69e-16!83;UBERON:0009618!1.69e-16!83;UBERON:0007285!1.69e-16!83;UBERON:0004290!5.81e-12!70;UBERON:0000475!2.07e-11!365;UBERON:0000486!1.45e-10!82;UBERON:0005256!1.53e-09!143;UBERON:0002199!3.23e-09!45;UBERON:0002416!3.23e-09!45;UBERON:0002385!3.27e-09!63;UBERON:0001015!3.27e-09!63;UBERON:0000383!3.27e-09!63;UBERON:0002097!4.93e-09!40;UBERON:0001134!5.33e-09!61;UBERON:0002036!5.33e-09!61;UBERON:0003082!5.33e-09!61;UBERON:0003102!7.48e-08!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.61e-09;41!UBERON:0002199;7.98e-07;46!UBERON:0002416;7.98e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.77e-11,41;UBERON:0002199,2.38e-10,46;UBERON:0002416,2.38e-10,46;UBERON:0003102,2.61e-08,99 | |||
|phase1_expression=0,0.642301571672949,0.422863212287913,2.00146596706261,0,0.872338524100369,2.53299878168311,0,0,0.491467873003018,0,0.873765488520689,1.05506791291381,0.37129905888014,0.994192127183747,0.672325146451775,0,0.730310090387373,0.975865597581014,0.369363174230364,1.63200552995402,0.940364164434263,0.572471974262113,0.821246550437305,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.50401373190767,0.724232594804119,0,0.486634870302636,1.03988298880475,0.443458794925128,0.87834785693126,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0.33472061276467,0,2.28081631715554,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.397227542439656,0.573673241497627,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0.538842688278752,0,0.302714855289863,0,0.937285727335186,0.312160076830321,0.570471821544449,0.448346041655403,0.23486899728753,0.647491777472526,0.561803226808994,0.204154171254893,0.491337269247072,0.309977343527296,1.18800285728205,3.4617370098998,2.73048408581408,1.43723628363248,0.505008341862199,0.375355559615893,1.10825646193673,3.95079858792754,1.83892677479412,1.20190447125277,0.113432183160021,1.97328599257748,4.27114777637135,2.7551147150743,1.50045548042201,3.91599611106068,0.772921620136887,1.8611685633159,1.18143432568886,1.55899208257918,1.26216887122057,2.48534726334208,0.646584227275248,1.42003837006646,1.71278566986988,2.88253006927829,0,0,0.286804595389004,0,0,0,0.10366105501537,0.252320850875628,0,7.8224766164908,1.28648187638577,1.38134921352481,3.71494342425583,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,1.47008711385542,0,0,0,0,0,1.02940686179115,0.219500570817251,0,0,0,0.977424915930974,0,1.44331342025273,0.695582429850461,0.352226082707465,0.577465791044295,0,0.380508304469197,0,0,0,0,0,0,0.839910640994298,1.13420077793909,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.258543431515556,3.57656445851882,0.845302752556,0.531876233169741,0,0.257207374262142,0,0.799266537048298,0.428933980974443,1.08524321078289,1.64648067356154,0.325736184293735,1.42156779497018,1.58390374586686,1.50719688529793,4.35766729300147,0.799783929456456,0,0,0,2.63587341040741,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0,1.08506009479894,2.70362119990049,2.3195768543631,2.20783381047509,0.585707074963566,2.10662269809403,4.5481500811197,2.0694614258501,0,1.84369168541703,2.25897397617015,0,0,0,0,0,0.303127571446259,0,0.907170879989041,0.992431231275107,2.14846762603287,2.52594084989766,0.512556597022804,1.02341449813341,1.28683136914886,0,0.616838775210622,0.355123450626254,0.9033987161519,1.03850885836724,0.813472649219715,0,0.200506470303285,0,0.34444334449382,0.910455840033585,2.36023946926963,0,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0,0,0,0.541892875087706,0,0.254876273045038,0,0.895499018888713,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0.193341436584244,0.462145851343933,0.307007349452259,0.275673144969061,0.429680979473094,1.30515024522806,0.0852266274161009,0.445160178233687,0.495854746082934,0,0,0.10115778085555,0.464845549297286,0.94443704049192,0.6970372701606,0.616067160352178,0.532306030317022,0,1.66791797193528,0.429374660225974,0,0.949138274156178,1.33441135746677,2.04718233049067,0.42793898803392,0.318203247925937,0,2.15846949099978,1.09814811894422,1.29593642580255,2.22400729730648,0,0,1.46290121726877,0.974853958525138,2.11300293513511,1.50149902548784,0.424216295861138,0,1.10273068709225,0,0.438450885253763,2.89387767133344,1.9676842561399,0.811641507850816,0.6196469961995,0.281695602532241,3.15504974848913,3.04572027140676,0,0,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.854592569019785,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,2.07875276582847,2.15012491469462,0,0,1.11308705022906,0,0,0.19924798825107,0,0,1.84083628503879,0,3.11039587661807,0.0898683511473268,0,0,0,0,3.33410970433911,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0.108647371922008,1.27600463892768,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.822251547880505,0,0.0633107959558787,0,0,0,0,0,2.63434171181606,0,0,0.124252535565433,0,1.22313785466253,0.313808538937,0.611989305817931,0.577901179803038,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0.720599767084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| ||
|short_description=p2@LAYN | |short_description=p2@LAYN | ||
}} | }} |
Latest revision as of 02:49, 25 September 2015
Short description: | p2@LAYN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LAYN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530962, uc010rwh.1_5end |
EntrezGene: | LAYN |
HGNC: | 29471 |
UniProt: | E9PK64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.95e-14 | 76 |
skin fibroblast | 2.81e-11 | 23 |
extraembryonic cell | 1.80e-07 | 19 |
multi fate stem cell | 2.41e-07 | 427 |
somatic stem cell | 5.35e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
skin of body | 9.77e-11 | 41 |
integument | 2.38e-10 | 46 |
integumental system | 2.38e-10 | 46 |
surface structure | 2.61e-08 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.67e-10 | 5 |
myotonic disease | 1.67e-10 | 5 |
muscle tissue disease | 1.67e-10 | 5 |
myopathy | 1.67e-10 | 5 |
muscular disease | 1.67e-10 | 5 |
myotonic dystrophy | 1.67e-10 | 5 |