FFCP PHASE1:Hg19::chr6:138188378..138188415,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:138188378..138188415,+ to FFCP PHASE1:Hg19::chr6:138188378..138188415,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7128 | |EntrezGene=7128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11896 | |HGNC=11896 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VXR0 | |UniProt=Q5VXR0 | ||
|association_with_transcript=27bp_to_ENST00000421450_5end | |||
|cluster_id=chr6:138188378..138188415,+ | |||
|coexpression_cluster_id=C290 | |||
|description=CAGE_peak_1_at_TNFAIP3_5end | |||
|id=chr6:138188378..138188415,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.67e-36!140;CL:0002087!1.56e-27!119;CL:0002031!8.08e-27!124;CL:0000037!1.48e-22!172;CL:0000566!1.48e-22!172;CL:0002057!4.07e-22!42;CL:0000988!1.74e-21!182;CL:0000766!2.00e-20!76;CL:0002032!3.59e-20!165;CL:0000837!3.59e-20!165;CL:0000860!3.16e-18!45;CL:0000557!3.14e-17!71;CL:0002009!1.99e-16!65;CL:0002194!2.22e-15!63;CL:0000576!2.22e-15!63;CL:0000040!2.22e-15!63;CL:0000559!2.22e-15!63;CL:0000839!6.32e-15!70;CL:0000838!6.60e-11!52;CL:0000542!9.38e-11!53;CL:0000051!9.38e-11!53;CL:0000763!3.96e-10!112;CL:0000049!3.96e-10!112;CL:0000723!5.20e-09!436;CL:0000048!7.32e-09!430;CL:0000034!2.00e-08!444;CL:0000134!8.92e-08!358;CL:0000359!3.07e-07!32;CL:0000084!5.18e-07!25;CL:0000827!5.18e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.95e-18;33!CL:0002057;8.95e-18;33!CL:0000473;5.99e-15;39!CL:0000234;5.99e-15;39!CL:0000576;2.31e-12;48!CL:0000766;7.92e-11;69!CL:0002087;6.34e-10;104!CL:0000738;2.60e-08;136!CL:0000084;5.47e-07;25!CL:0000359;8.00e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.28e-39,136;CL:0002087,6.35e-30,115;CL:0002031,4.23e-29,120;CL:0000037,3.48e-24,168;CL:0000988,1.54e-23,177;CL:0000766,4.32e-23,72;CL:0000473,3.49e-22,48;CL:0000234,3.49e-22,48;CL:0000860,4.01e-22,42;CL:0002057,4.01e-22,42;CL:0002032,1.00e-21,161;CL:0000837,1.00e-21,161;CL:0000557,1.05e-19,67;CL:0002009,5.58e-19,61;CL:0002194,7.20e-18,59;CL:0000576,7.20e-18,59;CL:0000040,7.20e-18,59;CL:0000559,7.20e-18,59;CL:0000839,3.51e-17,66;CL:0000763,2.25e-11,108;CL:0000049,2.25e-11,108;CL:0000838,6.55e-11,52;CL:0000542,9.32e-11,53;CL:0000051,9.32e-11,53;CL:0000723,8.02e-10,433;CL:0000048,1.19e-09,427;CL:0000034,3.41e-09,441;CL:0000134,1.16e-08,354;CL:0002320,1.76e-07,361;CL:0000359,3.06e-07,32;CL:0000084,5.16e-07,25;CL:0000827,5.16e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;3.12e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.81e-20!102;UBERON:0003061!3.81e-20!102;UBERON:0002193!5.07e-20!112;UBERON:0003081!8.54e-18!216;UBERON:0002405!9.66e-16!115;UBERON:0002371!2.38e-15!80;UBERON:0001474!4.82e-12!86;UBERON:0002204!8.44e-11!167;UBERON:0004765!1.02e-09!101;UBERON:0001434!1.02e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.75e-22,98;UBERON:0003061,2.75e-22,98;UBERON:0002193,5.08e-22,108;UBERON:0003081,3.39e-19,203;UBERON:0002405,6.31e-19,93;UBERON:0002371,1.92e-17,76;UBERON:0001474,9.16e-14,82;UBERON:0004765,1.63e-12,90;UBERON:0002204,4.76e-11,167;UBERON:0001434,2.80e-10,100;UBERON:0000926,5.98e-10,315;UBERON:0004120,5.98e-10,315;UBERON:0006603,5.98e-10,315;UBERON:0002384,8.79e-07,371 | |||
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| ||
|short_description=p1@TNFAIP3 | |||
}} | }} |
Latest revision as of 03:08, 25 September 2015
Short description: | p1@TNFAIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFAIP3_5end |
Coexpression cluster: | C290_Eosinophils_CD14_Basophils_Mast_CD4_CD8_immature |
Association with transcript: | 27bp_to_ENST00000421450_5end |
EntrezGene: | TNFAIP3 |
HGNC: | 11896 |
UniProt: | Q5VXR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.75e-22 | 98 |
blood island | 2.75e-22 | 98 |
hemolymphoid system | 5.08e-22 | 108 |
lateral plate mesoderm | 3.39e-19 | 203 |
immune system | 6.31e-19 | 93 |
bone marrow | 1.92e-17 | 76 |
bone element | 9.16e-14 | 82 |
skeletal element | 1.63e-12 | 90 |
musculoskeletal system | 4.76e-11 | 167 |
skeletal system | 2.80e-10 | 100 |
mesoderm | 5.98e-10 | 315 |
mesoderm-derived structure | 5.98e-10 | 315 |
presumptive mesoderm | 5.98e-10 | 315 |
connective tissue | 8.79e-07 | 371 |