FFCP PHASE1:Hg19::chr6:138195747..138195761,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7128 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11896 | |||
|TSSclassifier=strong | |||
|UniProt=Q5PY18 | |||
|association_with_transcript=-235bp_to_AY820830_5end | |||
|cluster_id=chr6:138195747..138195761,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_26_at_TNFAIP3_5end | |||
|id=chr6:138195747..138195761,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.47e-51!42;CL:0000860!1.36e-47!45;CL:0000766!1.54e-37!76;CL:0002194!4.86e-32!63;CL:0000576!4.86e-32!63;CL:0000040!4.86e-32!63;CL:0000559!4.86e-32!63;CL:0000839!2.34e-31!70;CL:0002009!6.35e-31!65;CL:0000557!7.49e-31!71;CL:0000763!5.78e-26!112;CL:0000049!5.78e-26!112;CL:0000738!3.27e-25!140;CL:0000988!7.98e-23!182;CL:0002087!4.96e-20!119;CL:0000037!2.12e-19!172;CL:0000566!2.12e-19!172;CL:0002031!4.54e-19!124;CL:0002032!6.90e-19!165;CL:0000837!6.90e-19!165;CL:0000080!1.41e-13!6;CL:0000134!2.35e-08!358;CL:0002320!4.56e-08!365;CL:0000775!6.21e-08!3;CL:0000081!1.01e-07!11;CL:0000219!4.67e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-58;33!CL:0002057;1.08e-58;33!CL:0000473;4.40e-42;39!CL:0000234;4.40e-42;39!CL:0000576;1.15e-23;48!CL:0000766;3.97e-18;69!CL:0002087;9.16e-13;104!CL:0000763;8.53e-12;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.58e-51,42;CL:0002057,3.58e-51,42;CL:0000473,1.12e-44,48;CL:0000234,1.12e-44,48;CL:0002194,1.41e-35,59;CL:0000576,1.41e-35,59;CL:0000040,1.41e-35,59;CL:0000559,1.41e-35,59;CL:0002009,2.11e-34,61;CL:0000839,9.06e-32,66;CL:0000557,2.74e-31,67;CL:0000766,4.38e-29,72;CL:0000763,3.67e-19,108;CL:0000049,3.67e-19,108;CL:0002087,6.05e-18,115;CL:0002031,3.68e-17,120;CL:0000738,4.94e-15,136;CL:0002032,1.52e-12,161;CL:0000837,1.52e-12,161;CL:0000037,5.62e-12,168;CL:0000988,2.59e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.68e-34;42!CL:0000049;4.68e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.29e-31!102;UBERON:0003061!2.29e-31!102;UBERON:0002193!4.54e-28!112;UBERON:0002371!7.21e-27!80;UBERON:0001474!1.14e-24!86;UBERON:0004765!2.28e-22!101;UBERON:0001434!2.28e-22!101;UBERON:0002405!5.10e-19!115;UBERON:0003081!6.22e-13!216;UBERON:0002204!1.45e-11!167;UBERON:0002384!1.12e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.58e-27,76;UBERON:0001474,1.81e-25,82;UBERON:0004765,3.79e-23,90;UBERON:0002405,2.23e-22,93;UBERON:0002390,3.37e-21,98;UBERON:0003061,3.37e-21,98;UBERON:0001434,9.27e-21,100;UBERON:0002193,3.67e-19,108;UBERON:0002204,4.69e-12,167;UBERON:0003081,1.01e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0.697287110717054,0,0.309706370895104,0.575384784644301,0.768482119587302,0.709446689665756,8.96338769915208,7.74581620300591,5.41705946377367,0.188242339542605,0,0,10.1007684482398,4.8139354061414,7.67204550958849,0,0,0,8.9964863974861,6.24123747160254,4.35975574296902,0,0,0,7.26479403160043,9.94349617166425,6.32924774881769,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p26@TNFAIP3 | |||
}} |
Latest revision as of 03:43, 25 September 2015
Short description: | p26@TNFAIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_TNFAIP3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -235bp_to_AY820830_5end |
EntrezGene: | TNFAIP3 |
HGNC: | 11896 |
UniProt: | Q5PY18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.58e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.58e-51 | 42 |
defensive cell | 1.12e-44 | 48 |
phagocyte | 1.12e-44 | 48 |
monopoietic cell | 1.41e-35 | 59 |
monocyte | 1.41e-35 | 59 |
monoblast | 1.41e-35 | 59 |
promonocyte | 1.41e-35 | 59 |
macrophage dendritic cell progenitor | 2.11e-34 | 61 |
myeloid lineage restricted progenitor cell | 9.06e-32 | 66 |
granulocyte monocyte progenitor cell | 2.74e-31 | 67 |
myeloid leukocyte | 4.38e-29 | 72 |
myeloid cell | 3.67e-19 | 108 |
common myeloid progenitor | 3.67e-19 | 108 |
nongranular leukocyte | 6.05e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 3.68e-17 | 120 |
leukocyte | 4.94e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.52e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-12 | 161 |
hematopoietic stem cell | 5.62e-12 | 168 |
hematopoietic cell | 2.59e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.58e-27 | 76 |
bone element | 1.81e-25 | 82 |
skeletal element | 3.79e-23 | 90 |
immune system | 2.23e-22 | 93 |
hematopoietic system | 3.37e-21 | 98 |
blood island | 3.37e-21 | 98 |
skeletal system | 9.27e-21 | 100 |
hemolymphoid system | 3.67e-19 | 108 |
musculoskeletal system | 4.69e-12 | 167 |
lateral plate mesoderm | 1.01e-09 | 203 |