FFCP PHASE1:Hg19::chr19:1132347..1132356,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:1132347..1132356,- to FFCP PHASE1:Hg19::chr19:1132347..1132356,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22904 | |EntrezGene=22904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29158 | |HGNC=29158 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2G9 | |UniProt=Q9Y2G9 | ||
|association_with_transcript=-74bp_to_ENST00000438103,NM_001100122,uc002lrj.3,uc010dsf.2,uc010xgj.1_5end | |||
|cluster_id=chr19:1132347..1132356,- | |||
|description=CAGE_peak_10_at_SBNO2_5end | |||
|id=chr19:1132347..1132356,- | |||
|ontology_enrichment_celltype=CL:0000055!3.37e-15!180;CL:0000057!9.90e-09!75;CL:0002371!3.09e-07!591;CL:0000144!5.86e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000135;3.68e-12;3!CL:0000388;3.68e-12;3!CL:0002564;9.12e-12;3!CL:0002602;4.83e-09;2!CL:0002559;3.21e-07;5!CL:0000499;3.76e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.37e-12,3;CL:0000388,2.37e-12,3;CL:0002564,5.02e-12,3;CL:0002602,4.97e-09,2;CL:0002559,2.87e-07,5;CL:0000499,2.94e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.13e-07!83;UBERON:0002329!2.13e-07!83;UBERON:0003077!2.13e-07!83;UBERON:0003059!2.13e-07!83;UBERON:0007282!2.13e-07!83;UBERON:0009618!2.13e-07!83;UBERON:0007285!2.13e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;4.20e-22;8!UBERON:0000982;4.20e-22;8!UBERON:0004770;4.20e-22;8!UBERON:0011135;4.49e-19;5!UBERON:0002216;4.49e-19;5!UBERON:0011134;4.49e-19;5!UBERON:0002209;4.49e-19;5!UBERON:0002213;4.49e-19;5!UBERON:0007844;4.49e-19;5!UBERON:0011138;4.49e-19;5!UBERON:0001130;4.49e-19;5!UBERON:0001066;4.49e-19;5!UBERON:0001468;4.49e-19;5!UBERON:0007846;3.68e-12;3!UBERON:0000043;3.68e-12;3!UBERON:0007845;3.68e-12;3!UBERON:0002242;9.12e-12;3!UBERON:0006444;4.83e-09;2!UBERON:0001995;4.83e-09;2!UBERON:0004715;4.83e-09;2!UBERON:0000075;6.62e-08;16!UBERON:0002073;3.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,2.27e-22,8;UBERON:0000982,2.27e-22,8;UBERON:0004770,2.27e-22,8;UBERON:0011135,2.52e-19,5;UBERON:0002216,2.52e-19,5;UBERON:0011134,2.52e-19,5;UBERON:0002209,2.52e-19,5;UBERON:0002213,2.52e-19,5;UBERON:0005856,2.52e-19,5;UBERON:0005866,2.52e-19,5;UBERON:0005863,2.52e-19,5;UBERON:0007844,2.52e-19,5;UBERON:0011138,2.52e-19,5;UBERON:0001130,2.52e-19,5;UBERON:0001066,2.52e-19,5;UBERON:0001468,2.52e-19,5;UBERON:0007846,2.37e-12,3;UBERON:0000043,2.37e-12,3;UBERON:0007845,2.37e-12,3;UBERON:0002242,5.02e-12,3;UBERON:0003068,5.02e-12,3;UBERON:0002328,5.02e-12,3;UBERON:0004880,5.02e-12,3;UBERON:0006444,4.97e-09,2;UBERON:0001995,4.97e-09,2;UBERON:0004715,4.97e-09,2;UBERON:0000075,5.30e-08,16;UBERON:0002073,2.87e-07,5;UBERON:0005086,2.87e-07,5 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,2.35156070624089,4.30816588446291,0,0,0,0,0.369363174230364,0.816002764977012,0.626909442956176,0,0,0.251085279189606,0.152826811495903,0,0,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0.377875943688809,0.485168122375632,0.697287110717054,0,0,0.863077176966451,1.0246428261164,1.41889337933151,0.344745680736619,0,0,0,0,0.449446968890169,0.306083892370903,0.641858054152187,0,0.329851300186716,1.19678194572979,1.27867425159808,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,2.01210257911091,1.40648818027883,1.0843174571537,0.50133791063589,0.144846518960824,0.795285947051099,1.94653948121054,0,0.221729397462564,0,0,0.364295288292542,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.529636723252875,0.573673241497627,0.354668382198357,1.12135520028461,0,0,0.622422070799533,0.134710672069688,0,0.302714855289863,0.576175924479999,0.70296429550139,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.413303124703062,0,0.247266929278557,0,0,0,0,0,0.877955241761676,0.919463387397059,0.600952235626387,0.113432183160021,0.358779271377724,0.427114777637135,0.211931901159562,0.900273288253207,0.309157587715317,0.515281080091258,0,0.168776332241266,0.194874010322397,1.00973509697646,0.276149695926898,0.323292113637624,0,0,0.169560592310488,0.386521706326594,0,0,0,0,0,0,0,0,0,3.21620469096443,1.38134921352481,0.928735856063958,1.44375896333917,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,0,1.44331342025273,0,0.352226082707465,0.288732895522148,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,1.06617584622764,0,0.602878754119172,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0,1.14861935834114,0,0.144781306667579,0.61642896765115,0.358121926479791,0.224170287987055,0,0.646882724578552,0.385029108839245,0.508189248444927,0,0.773288812777695,0,0.637938751653163,0.749007023947182,0,2.48649308061621,1.59498939234882,3.00102312635806,1.62759014219841,1.87173775377726,0.178428988797162,0.630809660135739,1.63997980989798,0.601892199455438,0,1.03473071292505,0.664225598535437,0.368738337083406,0.260650843404249,0,0,0,0,0,0.303127571446259,0,0,0.744323423456331,0.767309866440312,0.280660094433074,0.512556597022804,0,0.482561763430822,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0,0.574072240823034,0.182091168006717,0.393373244878272,0,0.231046011313244,2.35304930753057,0,0.316654886678627,0,0,0.431831832204279,0,1.08378575017541,0.501689773854853,0,0,0.671624264166535,0,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0.574265537996172,0,3.21367859688319,0.193341436584244,0,0.15350367472613,0,0.214840489736547,0.580066775656914,0,0.267096106940212,0.495854746082934,0,0.893288987462089,0.2023155617111,0.929691098594572,2.20368642781448,0,0.616067160352178,0.532306030317022,0,0.37064843820784,0.572499546967965,0,0.316379424718726,0.38126038784765,0,0.42793898803392,0.95460974377781,2.35484592059769,0,0.54907405947211,0.235624804691373,0.606547444719948,0,0.421258456238981,0.48763373908959,0.243713489631284,1.05650146756755,0.545999645631943,0.707027159768564,0,1.10273068709225,0.66343897524122,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0,0.143411352204052,0.294747123039363,0,0.354761064070598,1.05553817648832,1.97576935775941,0,0,0.384888450902048,0,2.17781969722645,0.0941438007767792,1.72202149068492,3.36942951335251,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0,0,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,1.81284261649436,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,0.451961481561065,0.13704192464675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| ||
|short_description=p10@SBNO2 | |||
}} | }} |
Latest revision as of 04:43, 25 September 2015
Short description: | p10@SBNO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SBNO2_5end |
Coexpression cluster: | NA |
Association with transcript: | -74bp_to_ENST00000438103, NM_001100122, uc002lrj.3, uc010dsf.2, uc010xgj.1_5end |
EntrezGene: | SBNO2 |
HGNC: | 29158 |
UniProt: | Q9Y2G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.37e-12 | 3 |
tendon cell | 2.37e-12 | 3 |
nucleus pulposus cell of intervertebral disc | 5.02e-12 | 3 |
annulus pulposus cell | 4.97e-09 | 2 |
hair follicle cell | 2.87e-07 | 5 |
stromal cell | 2.94e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
articulation | 2.27e-22 | 8 |
skeletal joint | 2.27e-22 | 8 |
articular system | 2.27e-22 | 8 |
intervertebral cartilage | 2.52e-19 | 5 |
symphysis | 2.52e-19 | 5 |
nonsynovial joint | 2.52e-19 | 5 |
fibrous joint | 2.52e-19 | 5 |
cartilaginous joint | 2.52e-19 | 5 |
developing mesenchymal condensation | 2.52e-19 | 5 |
pre-cartilage condensation | 2.52e-19 | 5 |
cartilaginous condensation | 2.52e-19 | 5 |
cartilage element | 2.52e-19 | 5 |
post-cranial axial skeletal system | 2.52e-19 | 5 |
vertebral column | 2.52e-19 | 5 |
intervertebral disk | 2.52e-19 | 5 |
intervertebral joint | 2.52e-19 | 5 |
dense regular connective tissue | 2.37e-12 | 3 |
tendon | 2.37e-12 | 3 |
regular connective tissue | 2.37e-12 | 3 |
nucleus pulposus | 5.02e-12 | 3 |
axial mesoderm | 5.02e-12 | 3 |
notochord | 5.02e-12 | 3 |
chordamesoderm | 5.02e-12 | 3 |
annulus fibrosus | 4.97e-09 | 2 |
fibrocartilage | 4.97e-09 | 2 |
annulus fibrosus disci intervertebralis | 4.97e-09 | 2 |
subdivision of skeletal system | 5.30e-08 | 16 |
hair follicle | 2.87e-07 | 5 |
hair follicle placode | 2.87e-07 | 5 |