FFCP PHASE1:Hg19::chr6:138893629..138893641,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21021 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SYE7 | |||
|association_with_transcript=26bp_to_NM_020464,uc003qhx.2_5end | |||
|cluster_id=chr6:138893629..138893641,- | |||
|description=CAGE_peak_24_at_NHSL1_5end | |||
|id=chr6:138893629..138893641,- | |||
|ontology_enrichment_celltype=CL:0000133!2.04e-15!59;CL:0000047!1.44e-12!8;CL:0000540!2.01e-12!6;CL:0000031!2.01e-12!6;CL:0000404!2.01e-12!6;CL:0000221!1.03e-11!71;CL:0002319!1.97e-10!25;CL:0000148!2.25e-10!10;CL:0000541!2.25e-10!10;CL:0000710!2.70e-09!20;CL:0000075!3.37e-09!27;CL:0000147!5.13e-09!14;CL:0000333!9.42e-08!41;CL:0000128!2.32e-07!7;CL:0000126!2.32e-07!7;CL:0000127!2.32e-07!7;CL:0002453!2.32e-07!7;CL:0000064!2.33e-07!3;CL:0005012!2.33e-07!3;CL:0000067!2.33e-07!3;CL:0002304!2.33e-07!3;CL:0002605!4.38e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002567;3.19e-14;3!CL:0000148;2.32e-09;10!CL:0002319;1.07e-08;25!CL:0000710;5.94e-08;20!CL:0000182;9.85e-08;12!CL:0000540;3.25e-07;6!CL:0000404;3.25e-07;6!CL:0002077;3.43e-07;34!CL:0000147;8.10e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.19e-14,3;CL:0000133,1.87e-11,59;CL:0000047,2.48e-11,8;CL:0000148,2.05e-09,10;CL:0000541,2.05e-09,10;CL:0000221,3.18e-09,72;CL:0002319,1.07e-08,25;CL:0000710,6.29e-08,20;CL:0000182,6.95e-08,12;CL:0000540,3.36e-07,6;CL:0000031,3.36e-07,6;CL:0000404,3.36e-07,6;CL:0002077,6.05e-07,34;CL:0000147,7.41e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0001041;5.56e-11;30!UBERON:0004161;2.16e-08;11!CL:0000031;3.25e-07;6!UBERON:0009497;3.57e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.72e-15!86;UBERON:0000073!2.21e-14!94;UBERON:0001016!2.21e-14!94;UBERON:0001017!2.50e-14!82;UBERON:0003075!2.40e-13!86;UBERON:0007284!2.40e-13!86;UBERON:0002346!2.13e-12!90;UBERON:0004121!1.03e-10!169;UBERON:0000924!3.19e-10!173;UBERON:0006601!3.19e-10!173;UBERON:0001049!1.84e-09!57;UBERON:0005068!1.84e-09!57;UBERON:0006241!1.84e-09!57;UBERON:0007135!1.84e-09!57;UBERON:0002616!5.56e-09!59;UBERON:0003056!7.18e-09!61;UBERON:0000956!8.57e-09!25;UBERON:0000203!8.57e-09!25;UBERON:0001869!1.19e-08!32;UBERON:0000483!2.09e-08!309;UBERON:0002791!2.68e-08!33;UBERON:0000119!3.43e-08!312;UBERON:0002020!5.74e-08!34;UBERON:0003528!5.74e-08!34;UBERON:0001893!5.74e-08!34;UBERON:0000033!1.17e-07!123;UBERON:0000153!1.26e-07!129;UBERON:0007811!1.26e-07!129;UBERON:0001778!2.33e-07!3;UBERON:0001775!2.33e-07!3;UBERON:0000955!8.11e-07!69;UBERON:0006238!8.11e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;8.61e-11;1!UBERON:0006518;8.61e-11;1!UBERON:0008949;8.61e-11;1!UBERON:0000101;8.61e-11;1!UBERON:0002167;8.61e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.21e-10,1;UBERON:0006518,1.21e-10,1;UBERON:0008949,1.21e-10,1;UBERON:0000101,1.21e-10,1;UBERON:0002167,1.21e-10,1;UBERON:0011216,5.79e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0.85870796139317,0.136874425072884,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03988298880475,0.665188192387692,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0.927443239800615,0.234817388471643,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761974731506028,3.4378958300245,4.68869788840188,0,0.616964956219941,0.600686115687835,1.71495859578347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,0,1.54657762555539,1.34013012267479,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,1.08194319871046,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,1.22429104652196,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,2.83619456306005,1.7307330260045,1.88729922791718,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0.320362237703084,1.10043013569766,1.24271716604159,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0.303298235083296,0,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.786329709279482,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,2.26864526599546,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0.126831620387814,1.64092442705466,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,1.6941912305844,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,1.30905207102113,0.5290268405154,0,0,0,0,0.218531143927391,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p24@NHSL1 | |||
}} |
Latest revision as of 05:10, 25 September 2015
Short description: | p24@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_NHSL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_NM_020464, uc003qhx.2_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | Q5SYE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.19e-14 | 3 |
neurectodermal cell | 1.87e-11 | 59 |
neuronal stem cell | 2.48e-11 | 8 |
melanocyte | 2.05e-09 | 10 |
melanoblast | 2.05e-09 | 10 |
ectodermal cell | 3.18e-09 | 72 |
neural cell | 1.07e-08 | 25 |
neurecto-epithelial cell | 6.29e-08 | 20 |
hepatocyte | 6.95e-08 | 12 |
neuron | 3.36e-07 | 6 |
neuroblast | 3.36e-07 | 6 |
electrically signaling cell | 3.36e-07 | 6 |
ecto-epithelial cell | 6.05e-07 | 34 |
pigment cell | 7.41e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.21e-10 | 1 |
right lung lobe | 1.21e-10 | 1 |
lower lobe of lung | 1.21e-10 | 1 |
lobe of lung | 1.21e-10 | 1 |
right lung | 1.21e-10 | 1 |
organ system subdivision | 5.79e-07 | 223 |