FFCP PHASE1:Hg19::chr3:142838741..142838764,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9435 | |EntrezGene=9435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1970 | |HGNC=1970 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=73bp_to_uc003evm.2_5end | |association_with_transcript=73bp_to_uc003evm.2_5end | ||
|cluster_id=chr3:142838741..142838764,+ | |||
|description=CAGE_peak_3_at_CHST2_5end | |description=CAGE_peak_3_at_CHST2_5end | ||
|id=chr3:142838741..142838764,+ | |id=chr3:142838741..142838764,+ | ||
|ontology_enrichment_celltype=CL:0000680!9.96e-08!57;CL:0000056!9.96e-08!57;CL:0000355!9.96e-08!57;CL:0000393!1.48e-07!60;CL:0000211!1.48e-07!60;CL:0000034!1.90e-07!444;CL:0000048!2.35e-07!430;CL:0000723!8.62e-07!436 | |ontology_enrichment_celltype=CL:0000680!9.96e-08!57;CL:0000056!9.96e-08!57;CL:0000355!9.96e-08!57;CL:0000393!1.48e-07!60;CL:0000211!1.48e-07!60;CL:0000034!1.90e-07!444;CL:0000048!2.35e-07!430;CL:0000723!8.62e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000594;1.11e-11;3!CL:0002551;1.06e-10;6!CL:0000188;2.59e-10;9!CL:0000244;1.28e-09;4!CL:0000731;1.28e-09;4!CL:0002195;1.46e-09;2!CL:0002571;1.46e-09;2!CL:0002549;8.15e-09;2!CL:0000680;1.29e-08;7!CL:0000723;7.32e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000594,7.79e-12,3;CL:0002551,1.45e-10,6;CL:0000188,1.68e-10,9;CL:0000244,1.20e-09,4;CL:0000731,1.20e-09,4;CL:0002195,1.47e-09,2;CL:0002571,1.47e-09,2;CL:0002549,1.16e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!6.62e-10!82;UBERON:0004290!1.96e-09!70;UBERON:0000914!1.71e-08!83;UBERON:0002329!1.71e-08!83;UBERON:0003077!1.71e-08!83;UBERON:0003059!1.71e-08!83;UBERON:0007282!1.71e-08!83;UBERON:0009618!1.71e-08!83;UBERON:0007285!1.71e-08!83;UBERON:0003076!1.76e-07!15;UBERON:0003057!1.76e-07!15;UBERON:0004733!3.93e-07!12;UBERON:0002028!3.93e-07!12;UBERON:0007277!3.93e-07!12 | |ontology_enrichment_uberon=UBERON:0000486!6.62e-10!82;UBERON:0004290!1.96e-09!70;UBERON:0000914!1.71e-08!83;UBERON:0002329!1.71e-08!83;UBERON:0003077!1.71e-08!83;UBERON:0003059!1.71e-08!83;UBERON:0007282!1.71e-08!83;UBERON:0009618!1.71e-08!83;UBERON:0007285!1.71e-08!83;UBERON:0003076!1.76e-07!15;UBERON:0003057!1.76e-07!15;UBERON:0004733!3.93e-07!12;UBERON:0002028!3.93e-07!12;UBERON:0007277!3.93e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0005284;2.17e-12;5!UBERON:0005629;8.15e-09;2!UBERON:0005358;8.15e-09;2!UBERON:0001886;8.15e-09;2!UBERON:0004086;8.15e-09;2!UBERON:0005282;8.15e-09;2!UBERON:0005281;8.15e-09;2!UBERON:0001134;6.77e-08;16!UBERON:0002036;6.77e-08;16!UBERON:0000365;9.01e-08;5!UBERON:0002067;3.84e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,2.12e-12,5;UBERON:0000486,1.24e-10,83;UBERON:0003124,2.04e-09,7;UBERON:0005629,1.16e-08,2;UBERON:0005358,1.16e-08,2;UBERON:0001886,1.16e-08,2;UBERON:0004086,1.16e-08,2;UBERON:0005282,1.16e-08,2;UBERON:0005281,1.16e-08,2;UBERON:0007524,2.66e-08,73;UBERON:0000365,8.54e-08,5;UBERON:0002329,2.09e-07,71;UBERON:0003059,2.09e-07,71;UBERON:0007282,2.09e-07,71;UBERON:0004290,2.09e-07,71;UBERON:0009618,2.09e-07,71;UBERON:0003077,2.91e-07,72;UBERON:0007285,2.91e-07,72;UBERON:0002067,4.72e-07,9;UBERON:0004016,4.72e-07,9;UBERON:0010083,4.72e-07,9 | |||
|phase1_expression=0,0.428201047781966,0.563817616383885,0,0.446961094427288,0,0,2.52687949370732,1.56711376919903,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0.626909442956176,0,0.410623275218653,0.502170558379211,0.0764134057479513,0,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0,0.587200878669695,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0.689491361473237,0,1.35426486594342,0.376484679085209,0,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,1.24564449799115,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0,0,0.285012743741249,0.79566670879636,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0.311211035399766,0.808264032418128,0.163461903113459,3.17850598054356,1.15235184896,0.70296429550139,2.49728061464256,2.2818872861778,2.09228152772521,1.05691048779388,0.323745888736263,0.702254033511242,0,0.122834317311768,0.309977343527296,0,0.494533858557114,0,2.15585442544872,0,0,0,0,0,0.751190294532984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,1.0366105501537,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.482022059766964,0,0.435758888184812,0,0.134831308160164,0,0,0.738155454624648,7.01208869017229,0,0,0,0,0,0.441463099414651,0,0.514703430895577,0,0,0,0,0,0,0,0.34779121492523,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.144119953416961,0.37872730027914,0,0,0,0,0.411309970813294,0.300343057843917,0,0.336393253036082,0,0.80672114403045,0,10.7296933755565,0,0,0,1.54324424557285,2.83698264046557,1.0656887160644,6.57698770827479,0,0,0.65147236858747,8.88479871856365,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.61642896765115,1.25342674267927,0,0.591092280605782,0.431255149719035,0.256686072559497,0.254094624222463,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0,4.34024037919577,0,0,0,0,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0.783204629850962,1.02943027143257,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.438519753291869,0.784306353074702,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.770243085573222,1.68854042198743,3.44591431211326,1.18162269355101,1.45016693914229,1.70453254832202,0.0890320356467374,0,0.384380134730212,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,1.48863347743867,0.316379424718726,1.5250415513906,4.09436466098134,0.42793898803392,0,0,0.539617372749944,0.54907405947211,0.471249609382746,0,0,0.421258456238981,0.975267478179181,0,0,0,0,0,0,0.66343897524122,0.438450885253763,1.15755106853338,0,0.405820753925408,0.30982349809975,0.845086807596724,0,0.196498082026242,0.35667105148125,0,0.211107635297664,0,0,0.699869440489966,0,0,0,0.188287601553558,3.44404298136984,0,1.33029046061003,4.82419140434615,0,0,0,0.714695326373367,0,0.648473311192717,0,0,0,0,0,0.371606350251437,1.87549976869378,0.355709216742071,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0.540911356951966,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0.140669416410513,0,0.659215496907038,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.884634079449797,2.06883333267483,0,0,0,0,0.113942055847001,0,0,0,4.46601623624687,0.732780747214898,3.19820865611181,0,0,0,0.451191321234361,0.19606253431774,0.335643173951685,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0.643012593860077,0.412618309791701,0,0.2249738915515,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0.197611631897944,0,0,0.544017803369474,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.620964029413834,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.50313580350515,0.889811221596536,0,0,0,0.295710299979268,0,0.449803112163605,0,0,0.265841714557995,1.04349012362347,0,0,0,0.363697318405119,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0.139879507719444,0.622077260032973,0,0,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| ||
|short_description=p3@CHST2 | |short_description=p3@CHST2 | ||
}} | }} |
Latest revision as of 05:18, 25 September 2015
Short description: | p3@CHST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHST2_5end |
Coexpression cluster: | NA |
Association with transcript: | 73bp_to_uc003evm.2_5end |
EntrezGene: | CHST2 |
HGNC: | 1970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle satellite cell | 7.79e-12 | 3 |
fibroblast of dermis | 1.45e-10 | 6 |
cell of skeletal muscle | 1.68e-10 | 9 |
transitional epithelial cell | 1.20e-09 | 4 |
urothelial cell | 1.20e-09 | 4 |
hepatic stem cell | 1.47e-09 | 2 |
hepatic mesenchymal stem cell | 1.47e-09 | 2 |
fibroblast of choroid plexus | 1.16e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 2.12e-12 | 5 |
multilaminar epithelium | 1.24e-10 | 83 |
chorion | 2.04e-09 | 7 |
vascular plexus | 1.16e-08 | 2 |
ventricle of nervous system | 1.16e-08 | 2 |
choroid plexus | 1.16e-08 | 2 |
brain ventricle | 1.16e-08 | 2 |
ventricular system of brain | 1.16e-08 | 2 |
ventricular system of central nervous system | 1.16e-08 | 2 |
dense mesenchyme tissue | 2.66e-08 | 73 |
urothelium | 8.54e-08 | 5 |
somite | 2.09e-07 | 71 |
presomitic mesoderm | 2.09e-07 | 71 |
presumptive segmental plate | 2.09e-07 | 71 |
dermomyotome | 2.09e-07 | 71 |
trunk paraxial mesoderm | 2.09e-07 | 71 |
paraxial mesoderm | 2.91e-07 | 72 |
presumptive paraxial mesoderm | 2.91e-07 | 72 |
dermis | 4.72e-07 | 9 |
dermatome | 4.72e-07 | 9 |
future dermis | 4.72e-07 | 9 |