FFCP PHASE1:Hg19::chr3:143690308..143690314,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=205428 | |EntrezGene=205428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28490 | |HGNC=28490 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NDZ4,B3KTD4 | |UniProt=Q8NDZ4,B3KTD4 | ||
|association_with_transcript=-325bp_to_ENST00000315691,NM_173552,uc003evo.2_5end | |association_with_transcript=-325bp_to_ENST00000315691,NM_173552,uc003evo.2_5end | ||
|cluster_id=chr3:143690308..143690314,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_13_at_C3orf58_5end | |description=CAGE_peak_13_at_C3orf58_5end | ||
|id=chr3:143690308..143690314,+ | |id=chr3:143690308..143690314,+ | ||
|ontology_enrichment_celltype=CL:0000860!3.18e-29!45;CL:0002057!5.72e-27!42;CL:0002009!1.97e-22!65;CL:0000557!2.19e-22!71;CL:0000839!5.64e-22!70;CL:0002194!2.10e-21!63;CL:0000576!2.10e-21!63;CL:0000040!2.10e-21!63;CL:0000559!2.10e-21!63;CL:0000766!2.12e-21!76;CL:0000738!2.76e-19!140;CL:0000763!1.26e-18!112;CL:0000049!1.26e-18!112;CL:0002031!7.07e-18!124;CL:0000988!8.19e-18!182;CL:0000037!5.74e-17!172;CL:0000566!5.74e-17!172;CL:0002032!2.62e-16!165;CL:0000837!2.62e-16!165;CL:0002087!4.14e-16!119 | |ontology_enrichment_celltype=CL:0000860!3.18e-29!45;CL:0002057!5.72e-27!42;CL:0002009!1.97e-22!65;CL:0000557!2.19e-22!71;CL:0000839!5.64e-22!70;CL:0002194!2.10e-21!63;CL:0000576!2.10e-21!63;CL:0000040!2.10e-21!63;CL:0000559!2.10e-21!63;CL:0000766!2.12e-21!76;CL:0000738!2.76e-19!140;CL:0000763!1.26e-18!112;CL:0000049!1.26e-18!112;CL:0002031!7.07e-18!124;CL:0000988!8.19e-18!182;CL:0000037!5.74e-17!172;CL:0000566!5.74e-17!172;CL:0002032!2.62e-16!165;CL:0000837!2.62e-16!165;CL:0002087!4.14e-16!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.47e-107;33!CL:0002057;8.47e-107;33!CL:0000473;1.27e-73;39!CL:0000234;1.27e-73;39!CL:0000576;1.54e-55;48!CL:0000766;2.66e-33;69!CL:0000763;1.72e-16;100!CL:0002087;1.91e-13;104!CL:0000738;1.40e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.71e-103,42;CL:0002057,2.71e-103,42;CL:0000473,1.80e-89,48;CL:0000234,1.80e-89,48;CL:0002009,4.13e-72,61;CL:0002194,4.09e-70,59;CL:0000576,4.09e-70,59;CL:0000040,4.09e-70,59;CL:0000559,4.09e-70,59;CL:0000557,4.34e-65,67;CL:0000839,5.05e-62,66;CL:0000766,4.68e-60,72;CL:0000763,6.34e-43,108;CL:0000049,6.34e-43,108;CL:0002031,2.73e-33,120;CL:0002087,1.03e-32,115;CL:0000738,1.49e-32,136;CL:0000037,1.34e-26,168;CL:0000988,1.71e-26,177;CL:0002032,2.49e-26,161;CL:0000837,2.49e-26,161;CL:0000134,2.91e-09,354;CL:0002320,6.27e-09,361;CL:0000219,9.37e-08,386;CL:0000048,6.15e-07,427;CL:0000723,9.94e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.60e-77;42!CL:0000049;3.61e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.36e-20!80;UBERON:0002390!3.01e-20!102;UBERON:0003061!3.01e-20!102;UBERON:0002193!1.31e-19!112;UBERON:0001474!1.06e-18!86;UBERON:0004765!9.75e-16!101;UBERON:0001434!9.75e-16!101;UBERON:0002405!2.75e-15!115 | |ontology_enrichment_uberon=UBERON:0002371!1.36e-20!80;UBERON:0002390!3.01e-20!102;UBERON:0003061!3.01e-20!102;UBERON:0002193!1.31e-19!112;UBERON:0001474!1.06e-18!86;UBERON:0004765!9.75e-16!101;UBERON:0001434!9.75e-16!101;UBERON:0002405!2.75e-15!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.32e-56,76;UBERON:0001474,5.68e-52,82;UBERON:0002405,3.65e-48,93;UBERON:0004765,9.62e-47,90;UBERON:0002390,2.41e-45,98;UBERON:0003061,2.41e-45,98;UBERON:0001434,2.26e-41,100;UBERON:0002193,1.76e-40,108;UBERON:0002204,7.15e-22,167;UBERON:0003081,9.14e-21,203;UBERON:0000926,1.36e-10,315;UBERON:0004120,1.36e-10,315;UBERON:0006603,1.36e-10,315;UBERON:0002384,1.79e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.408001382488506,0.313454721478088,0,0.547497700291537,0,0.152826811495903,0,0,1.57345710739562,0.383829398097213,0.154816123316076,0,0,0.369754010166788,0.619737604642413,0.284338464974843,0,0.553995408531877,1.40381113229099,1.51907609501096,0,0.32389366601898,0,2.18097358169347,3.77875943688809,3.63876091781724,3.95129362739664,2.05583944010913,7.74265927237759,5.46615545412086,2.81776777182011,3.31075121844019,3.7922024881028,3.87290810150296,10.8341189275473,2.63539275359647,2.45615535052061,3.82029923556644,5.81559395504715,4.17207735198922,9.59005688698562,2.63881040149373,1.79517291859469,3.83602275479425,7.54544020434318,6.80862269629368,13.7020894779026,4.77372463987812,2.60741459210101,3.69221035998698,8.47559303686716,8.10210799172642,6.96217252369946,0,0.850417199860174,0.419317291016752,0.44931452458598,0,0.32145117339416,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0.201606743224732,0.802320587350522,0,0,0,0,0,0,0,0,0.973269740605272,0,0.443458794925128,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.715471872916026,0,0.371457501329565,0.198762407366705,0,0.694281003215189,0.56530794192401,0.419499436209906,0,0.835979866147242,0.258416759169329,0.35576626268671,0.66944122552934,0,0,0,0,0.81014194788176,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.929932030581889,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0.769494313892781,0.738155454624648,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0.185176890317059,0,0,1.44331342025273,0.115930404975077,0,0.144366447761074,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0.425325291727159,0,0,0.383382679165211,0,0.088048434013226,0.414656231081544,0.288239906833923,0.25248486685276,0.126995788584338,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0.410952645100767,0,0,0.394061520403854,0.646882724578552,0.385029108839245,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0.533637789017222,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0.0920809889358963,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,1.54227252690289,0.270946437543853,0,0,0,0,0.657779629937804,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.386682873168488,0,0.614014698904518,0,0.107420244868274,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0.75894634753143,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0.28853842595289,0.142283686696828,0,0.199579371432817,0,0,0,0,1.36940807419915,0.156679895773023,0,0.338583555603207,0,0,0.425846237690326,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0.835218521685727,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0.614321404198464,0.994147647766298,0.140669416410513,0,0.329607748453519,0,0.19924798825107,0,0,0,0.369254416383208,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0.291604613383254,0.347249989866585,0,0.120596438625408,0,0.442317039724898,0,0,0.32681539055697,0.83654246567162,0,0.227884111694002,0,0.359030577639089,0.108647371922008,0,0,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0,0.167821586975843,0,0,0,0.816164040795739,0.282706142867882,0,0,0,0,0.593042257361244,0.247127877893006,0.104421949505455,0,0,0,0.182454789215666,0.391329237864179,0,0,0,0,0.063186579628488,1.20258735531594,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.609414446062818,0,0.171986032471617,1.83837029449262,1.60796497589608,0.574808199372465,0,0,0,0.137041924646751,0.19871461170299,0,0.391102765469606,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0.686379991447858,0.14405479798815,0.248505071130865,0.235694034616795,0,0,0.305994652908965,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.720599767084807,0,0.0787831823072236,0,0,0.393709926058995,0.0846733320657845,0,0,1.12527203925513,0.137539436597234,0.83088067605837,0.2249738915515,2.32140586367385,0,0,0,0.104909176269996,0,0,0.95957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| ||
|short_description=p13@C3orf58 | |short_description=p13@C3orf58 | ||
}} | }} |
Latest revision as of 05:24, 25 September 2015
Short description: | p13@C3orf58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_C3orf58_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -325bp_to_ENST00000315691, NM_173552, uc003evo.2_5end |
EntrezGene: | C3orf58 |
HGNC: | 28490 |
UniProt: | Q8NDZ4B3KTD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.71e-103 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.71e-103 | 42 |
defensive cell | 1.80e-89 | 48 |
phagocyte | 1.80e-89 | 48 |
macrophage dendritic cell progenitor | 4.13e-72 | 61 |
monopoietic cell | 4.09e-70 | 59 |
monocyte | 4.09e-70 | 59 |
monoblast | 4.09e-70 | 59 |
promonocyte | 4.09e-70 | 59 |
granulocyte monocyte progenitor cell | 4.34e-65 | 67 |
myeloid lineage restricted progenitor cell | 5.05e-62 | 66 |
myeloid leukocyte | 4.68e-60 | 72 |
myeloid cell | 6.34e-43 | 108 |
common myeloid progenitor | 6.34e-43 | 108 |
hematopoietic lineage restricted progenitor cell | 2.73e-33 | 120 |
nongranular leukocyte | 1.03e-32 | 115 |
leukocyte | 1.49e-32 | 136 |
hematopoietic stem cell | 1.34e-26 | 168 |
hematopoietic cell | 1.71e-26 | 177 |
hematopoietic oligopotent progenitor cell | 2.49e-26 | 161 |
hematopoietic multipotent progenitor cell | 2.49e-26 | 161 |
mesenchymal cell | 2.91e-09 | 354 |
connective tissue cell | 6.27e-09 | 361 |
motile cell | 9.37e-08 | 386 |
multi fate stem cell | 6.15e-07 | 427 |
somatic stem cell | 9.94e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.32e-56 | 76 |
bone element | 5.68e-52 | 82 |
immune system | 3.65e-48 | 93 |
skeletal element | 9.62e-47 | 90 |
hematopoietic system | 2.41e-45 | 98 |
blood island | 2.41e-45 | 98 |
skeletal system | 2.26e-41 | 100 |
hemolymphoid system | 1.76e-40 | 108 |
musculoskeletal system | 7.15e-22 | 167 |
lateral plate mesoderm | 9.14e-21 | 203 |
mesoderm | 1.36e-10 | 315 |
mesoderm-derived structure | 1.36e-10 | 315 |
presumptive mesoderm | 1.36e-10 | 315 |
connective tissue | 1.79e-08 | 371 |