FFCP PHASE1:Hg19::chr17:46675344..46675355,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:46675344..46675355,-
|short_description=p9@HOXB6
|description=CAGE_peak_9_at_HOXB6_5end
|association_with_transcript=156bp_to_AB464576,CU677079,DQ890732,H...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3216 | |EntrezGene=3216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5117 | |HGNC=5117 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=156bp_to_AB464576,CU677079,DQ890732,HQ447184_5end | |||
|cluster_id=chr17:46675344..46675355,- | |||
|description=CAGE_peak_9_at_HOXB6_5end | |||
|id=chr17:46675344..46675355,- | |||
|ontology_enrichment_celltype=CL:1000449!2.38e-10!16;CL:1000497!4.35e-10!18;CL:0002518!4.35e-10!18;CL:0002681!1.12e-08!13;CL:0002584!1.12e-08!13;CL:1000507!3.03e-07!12;CL:1000494!3.03e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002615;2.64e-13;3!CL:0002598;4.15e-10;2!CL:1000449;1.04e-09;15!CL:0002681;8.69e-09;12!CL:0002584;8.69e-09;12!CL:0002188;1.34e-08;5!CL:1000497;1.72e-08;17!CL:0002518;1.72e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.80e-13,3;CL:0002598,3.91e-10,2;CL:1000449,6.26e-10,15;CL:0002681,5.87e-09,12;CL:0002584,5.87e-09,12;CL:0002188,9.73e-09,5;CL:1000497,1.11e-08,17;CL:0002518,1.11e-08,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.45e-12!32;UBERON:0000080!1.42e-11!18;UBERON:0002120!1.42e-11!18;UBERON:0004875!1.42e-11!18;UBERON:0005721!1.42e-11!18;UBERON:0005754!1.42e-11!18;UBERON:0007297!1.42e-11!18;UBERON:0000058!3.25e-11!26;UBERON:0002113!5.26e-11!27;UBERON:0003918!5.26e-11!27;UBERON:0005095!5.26e-11!27;UBERON:0007687!5.26e-11!27;UBERON:0006555!1.00e-10!17;UBERON:0005103!1.00e-10!17;UBERON:0000083!1.00e-10!17;UBERON:0009201!1.00e-10!17;UBERON:0004819!1.00e-10!17;UBERON:0006553!1.00e-10!17;UBERON:0003074!1.00e-10!17;UBERON:0003060!1.00e-10!17;UBERON:0003887!1.04e-10!21;UBERON:0004211!2.38e-10!16;UBERON:0001285!2.38e-10!16;UBERON:0007684!2.38e-10!16;UBERON:0003220!2.38e-10!16;UBERON:0004208!2.38e-10!16;UBERON:0003886!3.48e-10!63;UBERON:0009569!4.19e-10!113;UBERON:0002417!8.82e-10!61;UBERON:0000916!8.82e-10!61;UBERON:0004876!9.56e-10!20;UBERON:0000353!4.75e-09!17;UBERON:0000464!1.09e-08!104;UBERON:0001225!1.12e-08!13;UBERON:0008987!1.12e-08!13;UBERON:0002553!1.78e-08!70;UBERON:0000466!2.57e-08!126;UBERON:0002100!3.39e-08!216;UBERON:0005177!6.02e-08!107;UBERON:0003103!1.91e-07!69;UBERON:0003914!2.66e-07!118;UBERON:0009773!3.03e-07!12;UBERON:0001231!3.03e-07!12;UBERON:0004810!3.03e-07!12;UBERON:0006554!3.78e-07!44;UBERON:0005172!6.32e-07!55;UBERON:0005173!6.32e-07!55;UBERON:0001008!8.45e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;7.44e-10;15!UBERON:0006555;1.04e-09;15!UBERON:0004819;1.04e-09;15!UBERON:0001285;1.04e-09;15!UBERON:0007684;1.04e-09;15!UBERON:0001225;8.69e-09;12!UBERON:0008987;8.69e-09;12!UBERON:0001851;5.77e-07;15!UBERON:0003688;7.20e-07;6!UBERON:0002358;7.20e-07;6!UBERON:0003684;7.20e-07;6!UBERON:0001178;7.20e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.59e-10,112;UBERON:0000353,4.68e-10,15;UBERON:0004211,6.26e-10,15;UBERON:0009773,6.26e-10,15;UBERON:0001231,6.26e-10,15;UBERON:0001285,6.26e-10,15;UBERON:0007684,6.26e-10,15;UBERON:0004208,6.26e-10,15;UBERON:0006555,2.88e-09,16;UBERON:0004819,2.88e-09,16;UBERON:0001225,5.87e-09,12;UBERON:0008987,5.87e-09,12;UBERON:0000080,3.75e-08,9;UBERON:0002120,3.75e-08,9;UBERON:0004875,3.75e-08,9;UBERON:0005721,3.75e-08,9;UBERON:0005754,3.75e-08,9;UBERON:0007297,3.75e-08,9;UBERON:0000058,8.64e-08,19;UBERON:0002417,9.22e-08,60;UBERON:0000916,9.22e-08,60;UBERON:0002113,2.69e-07,26;UBERON:0003918,2.69e-07,26;UBERON:0011143,2.69e-07,26;UBERON:0005095,2.69e-07,26;UBERON:0007687,2.69e-07,26;UBERON:0001851,4.25e-07,15;UBERON:0003688,8.59e-07,6;UBERON:0002358,8.59e-07,6;UBERON:0003684,8.59e-07,6;UBERON:0001178,8.59e-07,6 | |||
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| ||
|short_description=p9@HOXB6 | |||
}} | }} |
Latest revision as of 07:19, 25 September 2015
Short description: | p9@HOXB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HOXB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 156bp_to_AB464576, CU677079, DQ890732, HQ447184_5end |
EntrezGene: | HOXB6 |
HGNC: | 5117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.80e-13 | 3 |
bronchial smooth muscle cell | 3.91e-10 | 2 |
epithelial cell of nephron | 6.26e-10 | 15 |
kidney cortical cell | 5.87e-09 | 12 |
renal cortical epithelial cell | 5.87e-09 | 12 |
glomerular endothelial cell | 9.73e-09 | 5 |
kidney cell | 1.11e-08 | 17 |
kidney epithelial cell | 1.11e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 1.59e-10 | 112 |
parenchyma | 4.68e-10 | 15 |
nephron epithelium | 6.26e-10 | 15 |
renal tubule | 6.26e-10 | 15 |
nephron tubule | 6.26e-10 | 15 |
nephron | 6.26e-10 | 15 |
uriniferous tubule | 6.26e-10 | 15 |
nephrogenic mesenchyme | 6.26e-10 | 15 |
excretory tube | 2.88e-09 | 16 |
kidney epithelium | 2.88e-09 | 16 |
cortex of kidney | 5.87e-09 | 12 |
renal parenchyma | 5.87e-09 | 12 |
mesonephros | 3.75e-08 | 9 |
pronephros | 3.75e-08 | 9 |
nephrogenic cord | 3.75e-08 | 9 |
pronephric mesoderm | 3.75e-08 | 9 |
rostral part of nephrogenic cord | 3.75e-08 | 9 |
presumptive pronephric mesoderm | 3.75e-08 | 9 |
duct | 8.64e-08 | 19 |
abdominal segment of trunk | 9.22e-08 | 60 |
abdomen | 9.22e-08 | 60 |
kidney | 2.69e-07 | 26 |
kidney mesenchyme | 2.69e-07 | 26 |
upper urinary tract | 2.69e-07 | 26 |
kidney rudiment | 2.69e-07 | 26 |
kidney field | 2.69e-07 | 26 |
cortex | 4.25e-07 | 15 |
omentum | 8.59e-07 | 6 |
peritoneum | 8.59e-07 | 6 |
abdominal cavity | 8.59e-07 | 6 |
visceral peritoneum | 8.59e-07 | 6 |