FFCP PHASE1:Hg19::chr7:116165709..116165737,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=857 | |EntrezGene=857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1527 | |HGNC=1527 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-56bp_to_ENST00000405348_5end | |association_with_transcript=-56bp_to_ENST00000405348_5end | ||
|cluster_id=chr7:116165709..116165737,+ | |||
|coexpression_cluster_id=C95 | |coexpression_cluster_id=C95 | ||
|description=CAGE_peak_7_at_CAV1_5end | |description=CAGE_peak_7_at_CAV1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!5.02e-20!180;CL:0000057!1.02e-14!75;CL:0000220!3.23e-11!246;CL:0002321!9.60e-11!248;CL:0000680!5.26e-10!57;CL:0000056!5.26e-10!57;CL:0000355!5.26e-10!57;CL:0000222!1.72e-09!119;CL:0002620!2.43e-09!23;CL:0000187!1.58e-08!54;CL:0000548!9.95e-08!679;CL:0000004!9.95e-08!679;CL:0000255!9.95e-08!679;CL:0000393!2.50e-07!60;CL:0000211!2.50e-07!60;CL:0000183!2.76e-07!59;CL:0000012!3.05e-07!682 | |ontology_enrichment_celltype=CL:0000055!5.02e-20!180;CL:0000057!1.02e-14!75;CL:0000220!3.23e-11!246;CL:0002321!9.60e-11!248;CL:0000680!5.26e-10!57;CL:0000056!5.26e-10!57;CL:0000355!5.26e-10!57;CL:0000222!1.72e-09!119;CL:0002620!2.43e-09!23;CL:0000187!1.58e-08!54;CL:0000548!9.95e-08!679;CL:0000004!9.95e-08!679;CL:0000255!9.95e-08!679;CL:0000393!2.50e-07!60;CL:0000211!2.50e-07!60;CL:0000183!2.76e-07!59;CL:0000012!3.05e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.30e-11;23 | |ontology_enrichment_celltype_v019=CL:0002620;8.30e-11;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.12e-15,76;CL:0002620,6.46e-11,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.44e-15!83;UBERON:0002329!3.44e-15!83;UBERON:0003077!3.44e-15!83;UBERON:0003059!3.44e-15!83;UBERON:0007282!3.44e-15!83;UBERON:0009618!3.44e-15!83;UBERON:0007285!3.44e-15!83;UBERON:0004290!8.03e-12!70;UBERON:0003102!2.12e-11!95;UBERON:0000486!3.03e-11!82;UBERON:0002199!3.75e-10!45;UBERON:0002416!3.75e-10!45;UBERON:0002097!8.47e-10!40;UBERON:0002100!5.07e-09!216;UBERON:0001134!5.69e-09!61;UBERON:0002036!5.69e-09!61;UBERON:0003082!5.69e-09!61;UBERON:0005256!6.78e-09!143;UBERON:0002385!7.04e-09!63;UBERON:0001015!7.04e-09!63;UBERON:0000383!7.04e-09!63;UBERON:0003104!1.50e-08!238;UBERON:0009142!1.50e-08!238;UBERON:0004872!1.34e-07!84;UBERON:0001637!8.38e-07!42;UBERON:0003509!8.38e-07!42;UBERON:0004572!8.38e-07!42 | |ontology_enrichment_uberon=UBERON:0000914!3.44e-15!83;UBERON:0002329!3.44e-15!83;UBERON:0003077!3.44e-15!83;UBERON:0003059!3.44e-15!83;UBERON:0007282!3.44e-15!83;UBERON:0009618!3.44e-15!83;UBERON:0007285!3.44e-15!83;UBERON:0004290!8.03e-12!70;UBERON:0003102!2.12e-11!95;UBERON:0000486!3.03e-11!82;UBERON:0002199!3.75e-10!45;UBERON:0002416!3.75e-10!45;UBERON:0002097!8.47e-10!40;UBERON:0002100!5.07e-09!216;UBERON:0001134!5.69e-09!61;UBERON:0002036!5.69e-09!61;UBERON:0003082!5.69e-09!61;UBERON:0005256!6.78e-09!143;UBERON:0002385!7.04e-09!63;UBERON:0001015!7.04e-09!63;UBERON:0000383!7.04e-09!63;UBERON:0003104!1.50e-08!238;UBERON:0009142!1.50e-08!238;UBERON:0004872!1.34e-07!84;UBERON:0001637!8.38e-07!42;UBERON:0003509!8.38e-07!42;UBERON:0004572!8.38e-07!42 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.79e-08,99;UBERON:0002329,1.83e-08,71;UBERON:0003059,1.83e-08,71;UBERON:0007282,1.83e-08,71;UBERON:0004290,1.83e-08,71;UBERON:0009618,1.83e-08,71;UBERON:0007524,1.98e-08,73;UBERON:0003077,3.38e-08,72;UBERON:0007285,3.38e-08,72;UBERON:0002097,4.89e-08,41;UBERON:0002199,5.15e-08,46;UBERON:0002416,5.15e-08,46;UBERON:0007503,6.01e-08,78 | |||
|phase1_expression=0.908391896352783,1.2846031433459,1.9733616573436,0,0.446961094427288,2.61701557230111,0,0.631719873426831,0.783556884599516,1.96587149201207,2.09340350391728,0.436882744260345,1.31883489114227,1.36142988256051,2.31978163009541,0.672325146451775,3.61616716814386,2.92124036154949,2.43966399395253,1.10808952269109,1.22400414746552,0,0.286235987131057,1.36874425072884,0.627713197974014,0.229240217243854,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,0.90361775633475,0.739508020333575,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.2786256184353,3.2529523714611,0.50133791063589,1.01392563272577,0,0.486634870302636,1.03988298880475,0.665188192387692,0.790513071238134,9.43049343583531,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,3.39184765154406,0.419499436209906,1.37559020970034,0,1.03366703667732,0.35576626268671,0.33472061276467,1.20848795132744,0,0.732186172644509,1.10298924103761,0,0.357198913136319,0.22452937262617,0.563057402416611,0,0.949265659568129,0.916008719652036,0,0,0.872188104285069,0.993943903390637,1.77282716330412,0.926864265692532,0.573673241497627,1.77334191099179,0,1.06748995729705,0.24666754841716,0.622422070799533,0.538842688278752,0.326923806226917,0.151357427644931,0,0.234321431833797,1.24864030732128,1.1409436430889,0.597794722207204,2.11382097558777,3.23745888736263,3.08991774744947,1.83738754129404,2.7023549808589,1.23990937410919,3.56400857184616,0.247266929278557,2.73048408581408,0.718618141816238,1.85169725349473,2.12701483782339,1.93944880838928,3.07284334616587,3.0648779579902,2.40380894250555,1.24775401476023,1.79389635688862,1.92201649936711,1.90738711043606,4.20127534518163,2.88547081867629,1.28820270022815,1.48893485065272,1.5189869901714,1.07180705677318,2.27190396819703,1.19664868234989,0.80823028409406,1.77504796258307,3.12331504505685,2.54340888465731,0.966304265816484,0.545492241181669,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,3.85944562915731,1.38134921352481,0.928735856063958,0,2.01121560067735,2.02301628093722,0.964044119533928,1.43382164552112,1.96091499683166,1.66089433377768,2.02246962240247,1.96221465125346,0.769494313892781,0,0,0.8231480226628,0,0,0,0,0,0,0.857839051492628,0.768251997860379,1.1240175325762,0.502644862058154,0.462942225792648,0.325808305310325,0,0,0.231860809950154,1.29149563659404,0.577465791044295,0,0.570762456703795,3.1608175918371,0,0,0,0,0,2.01578553838631,1.13420077793909,1.79117045405697,0.871901815541886,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.448524337381443,0,1.24675085895615,0.646358578788889,0,3.381211010224,4.25500986535793,0,1.54324424557285,0,0.532844358032199,0,0,0,1.95441710576241,0,0,0.602878754119172,0,0.199945982364114,0,0,0,3.11512312139057,0,8.5582143024431,3.61953266668948,3.49309748335652,5.01370697071708,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0.813795071099207,3.11956292296211,5.53129865271201,2.36553622550902,3.16281820480326,0.902838299183157,2.27407504055985,0,1.32845119707087,2.58116835958384,2.34585759063824,0,0,0,0,0,1.21251028578504,3.32870879020994,3.0239029332968,1.98486246255021,1.38115775959256,0,1.02511319404561,2.55853624533352,0.965123526861645,0,3.54682295746108,1.77561725313127,2.87445046048332,2.07701771673448,2.5566283261191,0,2.00506470303285,0.644566922551274,1.60740227430449,2.91345868810747,0.917870904715969,0,0.462092022626489,0,0,0.527758144464379,0,0.340187410553031,0.863663664408557,1.54227252690289,0.812839312631559,0,0.764628819135115,0,0.447749509444357,0,0,0,0.328014645699706,0,9.37673205994273,0,0,0.574265537996172,3.25030123018261,1.6068392984416,0.870036464629098,2.00263202249038,1.5350367472613,2.20538515975249,1.07420244868274,1.45016693914229,1.19317278382541,0.267096106940212,2.14870389969272,1.92190067365106,0.638063562472921,0.6069466851333,1.39453664789186,4.7221852024596,1.3940745403212,0.924100740528266,0,0.869932992075073,0.9266210955196,2.43312307461385,0.372158369359667,0.316379424718726,0.762520775695299,1.02359116524534,1.71175595213568,1.59101623962968,0,1.07923474549989,0.274537029736055,1.29593642580255,0.404364963146632,4.75530963519025,0.421258456238981,0,0.974853958525138,1.05650146756755,0.9554993798559,0.282810863907425,0,1.10273068709225,0.66343897524122,1.31535265576129,0.578775534266688,0.655894752046633,0.811641507850816,1.8589409885985,1.69017361519345,1.29070216983646,0.88424136911809,1.426684205925,0.709522128141196,0.422215270595328,0.987884678879706,0.379473173765715,0.349934720244983,1.15466535270614,0.670302275535787,0,9.50852387845469,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,2.88743956579008,1.22520107990516,0.929015875628594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,3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| ||
|short_description=p7@CAV1 | |short_description=p7@CAV1 | ||
}} | }} |
Latest revision as of 07:27, 25 September 2015
Short description: | p7@CAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CAV1_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -56bp_to_ENST00000405348_5end |
EntrezGene: | CAV1 |
HGNC: | 1527 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.12e-15 | 76 |
skin fibroblast | 6.46e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.79e-08 | 99 |
somite | 1.83e-08 | 71 |
presomitic mesoderm | 1.83e-08 | 71 |
presumptive segmental plate | 1.83e-08 | 71 |
dermomyotome | 1.83e-08 | 71 |
trunk paraxial mesoderm | 1.83e-08 | 71 |
dense mesenchyme tissue | 1.98e-08 | 73 |
paraxial mesoderm | 3.38e-08 | 72 |
presumptive paraxial mesoderm | 3.38e-08 | 72 |
skin of body | 4.89e-08 | 41 |
integument | 5.15e-08 | 46 |
integumental system | 5.15e-08 | 46 |
epithelial vesicle | 6.01e-08 | 78 |