FFCP PHASE1:Hg19::chr17:46687959..46688007,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3217 | |EntrezGene=3217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5118 | |HGNC=5118 | ||
|TSSclassifier=strong | |||
|UniProt=P09629 | |UniProt=P09629 | ||
|association_with_transcript=0bp_to_S49765_5end | |association_with_transcript=0bp_to_S49765_5end | ||
|cluster_id=chr17:46687959..46688007,- | |||
|description=CAGE_peak_2_at_HOXB7_5end | |description=CAGE_peak_2_at_HOXB7_5end | ||
|id=chr17:46687959..46688007,- | |id=chr17:46687959..46688007,- | ||
|ontology_enrichment_celltype=CL:0000066!1.05e-14!254;CL:0000222!1.03e-07!119;CL:0000136!2.13e-07!15;CL:1000497!3.33e-07!18;CL:0002518!3.33e-07!18;CL:0000213!6.55e-07!57;CL:0000215!6.55e-07!57;CL:1000449!8.89e-07!16 | |ontology_enrichment_celltype=CL:0000066!1.05e-14!254;CL:0000222!1.03e-07!119;CL:0000136!2.13e-07!15;CL:1000497!3.33e-07!18;CL:0002518!3.33e-07!18;CL:0000213!6.55e-07!57;CL:0000215!6.55e-07!57;CL:1000449!8.89e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000497;3.73e-08;17!CL:0002518;3.73e-08;17!CL:1000449;1.17e-07;15!CL:0000136;1.34e-07;13!CL:0002681;3.50e-07;12!CL:0002584;3.50e-07;12!CL:0002334;4.33e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.41e-16,253;CL:0000222,1.20e-08,121;CL:0000136,1.81e-08,15;CL:1000497,3.94e-08,17;CL:0002518,3.94e-08,17;CL:0000213,6.03e-08,58;CL:0000215,6.03e-08,58;CL:1000449,1.24e-07,15;CL:0002334,3.79e-07,12;CL:0002681,5.00e-07,12;CL:0002584,5.00e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.09e-16!143;DOID:162!3.22e-15!235;DOID:14566!4.47e-15!239;DOID:305!1.22e-13!106;DOID:299!8.11e-08!25 | |ontology_enrichment_disease=DOID:0050687!6.09e-16!143;DOID:162!3.22e-15!235;DOID:14566!4.47e-15!239;DOID:305!1.22e-13!106;DOID:299!8.11e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:299;2.40e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.07e-16,143;DOID:162,2.14e-16,235;DOID:14566,3.15e-16,239;DOID:305,3.41e-15,106;DOID:299,2.20e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0002100!4.55e-12!216;UBERON:0003104!7.23e-10!238;UBERON:0009142!7.23e-10!238;UBERON:0009569!1.17e-09!113;UBERON:0001008!5.73e-09!45;UBERON:0006554!1.79e-08!44;UBERON:0000489!2.56e-08!32;UBERON:0005177!2.77e-08!107;UBERON:0003886!3.32e-08!63;UBERON:0002417!6.00e-08!61;UBERON:0000916!6.00e-08!61;UBERON:0003064!6.41e-08!37;UBERON:0000080!1.11e-07!18;UBERON:0002120!1.11e-07!18;UBERON:0004875!1.11e-07!18;UBERON:0005721!1.11e-07!18;UBERON:0005754!1.11e-07!18;UBERON:0007297!1.11e-07!18;UBERON:0000058!1.83e-07!26;UBERON:0005409!1.90e-07!35;UBERON:0003887!3.60e-07!21;UBERON:0002113!3.68e-07!27;UBERON:0003918!3.68e-07!27;UBERON:0005095!3.68e-07!27;UBERON:0007687!3.68e-07!27;UBERON:0006555!4.35e-07!17;UBERON:0005103!4.35e-07!17;UBERON:0000083!4.35e-07!17;UBERON:0009201!4.35e-07!17;UBERON:0004819!4.35e-07!17;UBERON:0006553!4.35e-07!17;UBERON:0003074!4.35e-07!17;UBERON:0003060!4.35e-07!17;UBERON:0001737!5.13e-07!9;UBERON:0001851!5.56e-07!16;UBERON:0004876!7.12e-07!20;UBERON:0004921!7.80e-07!129;UBERON:0004185!7.80e-07!129;UBERON:0004211!8.89e-07!16;UBERON:0001285!8.89e-07!16;UBERON:0007684!8.89e-07!16;UBERON:0003220!8.89e-07!16;UBERON:0004208!8.89e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.31e-08;30!UBERON:0001008;1.31e-08;30!UBERON:0001737;4.67e-08;9!UBERON:0001557;4.67e-08;9!UBERON:0001851;4.99e-08;15!UBERON:0000489;1.02e-07;29!UBERON:0006555;1.17e-07;15!UBERON:0004819;1.17e-07;15!UBERON:0001285;1.17e-07;15!UBERON:0007684;1.17e-07;15!UBERON:0000353;3.11e-07;15!UBERON:0001225;3.50e-07;12!UBERON:0008987;3.50e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.20e-13,199;UBERON:0003104,1.96e-09,160;UBERON:0009142,1.96e-09,160;UBERON:0000489,1.06e-08,31;UBERON:0009569,1.80e-08,112;UBERON:0001737,5.11e-08,9;UBERON:0006555,5.33e-08,16;UBERON:0004819,5.33e-08,16;UBERON:0001851,7.02e-08,15;UBERON:0002417,8.45e-08,60;UBERON:0000916,8.45e-08,60;UBERON:0004211,1.24e-07,15;UBERON:0009773,1.24e-07,15;UBERON:0001231,1.24e-07,15;UBERON:0001285,1.24e-07,15;UBERON:0007684,1.24e-07,15;UBERON:0004208,1.24e-07,15;UBERON:0002113,2.42e-07,26;UBERON:0003918,2.42e-07,26;UBERON:0011143,2.42e-07,26;UBERON:0005095,2.42e-07,26;UBERON:0007687,2.42e-07,26;UBERON:0001008,3.11e-07,48;UBERON:0000353,3.96e-07,15;UBERON:0001225,5.00e-07,12;UBERON:0008987,5.00e-07,12;UBERON:0006554,9.59e-07,47 | |||
|phase1_expression=8.53888382571616,7.70761886007539,9.58489947852604,9.00659685178174,4.91657203870017,4.36169262050184,7.59899634504932,3.15859936713415,3.3954131665979,4.17747692052565,2.09340350391728,0.873765488520689,0.791300934685361,4.82688776544182,3.64537113300707,3.36162573225888,1.80808358407193,3.65155045193687,2.43966399395253,0,0,0,0,0,0,0.993374274723366,0.985207073399349,0.629686250509434,0,0,0.154816123316076,0,0.30120591877825,0,0,1.84820002233648,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,2.35762335895883,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.208994966536811,6.71883573840255,4.98072767761394,7.69857409358742,2.81980521976403,3.80136052859256,3.1728067481262,5.14728312484216,9.72170337458112,6.87607907787414,8.08305741454211,11.7115939702655,9.19899824795299,6.6448596169769,6.41206103756425,0,0,0.436094052142534,0,0.25326102332916,0.397227542439656,0.286836620748814,1.77334191099179,0,0,0,0,0,0,0,0,0.234321431833797,0,2.2818872861778,9.26581819421167,5.04968344168189,6.79866366346152,7.30344194851692,0,0,0,0,0,13.6524204290704,9.3420358436111,0,0,0,0,0,0,0.226864366320042,0.538168907066586,0.85422955527427,0.423863802319124,2.10063767259082,4.43125875725287,0,2.41951913231067,2.02531598689519,5.45647228902712,0.757301322732344,3.31379635112278,0,0.355009592516614,2.31729825923573,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,1.38134921352481,3.25057549622385,2.88751792667834,12.3039072041438,9.946496714608,11.0865073746402,15.4411561825352,10.6760927605279,9.25355414533277,11.1909985772936,9.02618739576592,14.2356448070164,2.21446636387394,1.40241773803446,4.115740113314,2.94017422771084,1.26755034821831,0,0,0,10.0850519605353,0,0,0,0.402115889646523,0,0,0,0,0,0.117408694235822,2.30986316417718,3.24089858803628,2.47330397904978,0.790204397959275,1.71697232418975,0,0,0,0.93733833986777,0,0,0.358234090811393,0,0,0,0.088048434013226,0.829312462163088,1.58531948758658,0.6312121671319,6.60378100638558,6.875791660049,0,3.4214489204541,6.47813204030938,4.50514586765876,4.85904935471983,0,0,0,4.26596662000667,14.3062578340753,1.690605505112,0.531876233169741,1.04007436911366,0.771622122786426,12.766421882095,1.0656887160644,1.14382394926518,6.51145926469732,0.823240336780769,2.28015329005615,0.355391948742546,2.37585561880029,7.53598442648965,8.71533458600294,5.59848750619519,0,0,0,0,0,18.5427976552934,5.06734573336527,1.64381058040307,7.16243852959582,4.48340575974109,0,0,0.256686072559497,0,0,0,0,0,0,0,0,3.18997878469764,7.50255781589516,3.52644530809656,0,0,0,0,0.902838299183157,0,1.03473071292505,0,1.29058417979192,0,0.391602314925481,0.686286847621712,0,0,0.106727557803444,0.606255142892519,0,0.604780586659361,10.9167435440262,2.14846762603287,11.2264037773229,8.96974044789907,7.67560873600055,8.84696566289841,4.45254199334973,6.9394362211195,4.97172830876756,9.11611431753281,4.67328986265259,7.66988497835731,8.33930202182193,7.41873940122154,4.69613043573071,0,0,0.262248829918848,7.21919380651859,3.08061348417659,3.92174884588428,5.84556898613043,1.79437769117889,7.96133688496276,8.84487267437881,6.90930931526846,13.880452742126,8.12839312631558,4.01351819083883,13.253566198342,8.31076008928724,6.26849313222099,2.19259876645935,0.784306353074702,0,0,0,2.36994326789761,4.2121953816438,4.53802249563234,0,0.650060246036521,0,0.96670718292122,2.00263202249038,1.22802939780904,1.92971201478343,0,0,3.57951835147624,0.267096106940212,0,0,0,0,6.507837690162,0.62962469366128,1.3940745403212,2.46426864140871,1.06461206063404,0.869932992075073,0,0,0,0.632758849437452,2.47819252100972,6.65334257409468,2.56763392820352,0,0,3.59744915166629,4.66712950551293,4.94812089851883,0,0,0,0,7.55511817856982,7.39551027297288,0.9554993798559,0.424216295861138,2.26016233240486,0,0,2.63070531152258,0.578775534266688,1.31178950409327,7.91350470154546,3.40805847909725,3.3803472303869,2.72481569187698,2.35797698431491,7.49009208110625,0,0,0,0,0,0.48111056362756,0,0,1.50630081242847,7.74909670808214,8.42357378338128,6.65145230305014,2.98640420269047,0,0,0,0,0,0.648473311192717,0,0,1.06824071127473,0,11.7619303670895,0,0,0,0.797131363644112,0,0,1.05836791361941,0,1.40398589056729,0,0,2.50634477090067,0,0,0,0,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0.33307196799782,0,26.386816197559,2.3441308683503,3.39809460898638,1.44876399560722,5.39858678932185,0,0,0,0,0,0,0.494411622680279,0,2.78947183551498,3.03912307084262,1.76352923497993,9.61325615520255,0.984678443688556,0,0.0898683511473268,3.04335996948536,0,1.87422470710174,0,18.8932883245883,0,0.0927680981618513,0,2.86470537193757,0,9.42499448065232,0,0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| ||
|short_description=p2@HOXB7 | |short_description=p2@HOXB7 | ||
}} | }} |
Latest revision as of 07:30, 25 September 2015
Short description: | p2@HOXB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXB7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_S49765_5end |
EntrezGene: | HOXB7 |
HGNC: | 5118 |
UniProt: | P09629 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.41e-16 | 253 |
mesodermal cell | 1.20e-08 | 121 |
fat cell | 1.81e-08 | 15 |
kidney cell | 3.94e-08 | 17 |
kidney epithelial cell | 3.94e-08 | 17 |
lining cell | 6.03e-08 | 58 |
barrier cell | 6.03e-08 | 58 |
epithelial cell of nephron | 1.24e-07 | 15 |
preadipocyte | 3.79e-07 | 12 |
kidney cortical cell | 5.00e-07 | 12 |
renal cortical epithelial cell | 5.00e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk | 3.20e-13 | 199 |
mesenchyme | 1.96e-09 | 160 |
entire embryonic mesenchyme | 1.96e-09 | 160 |
cavitated compound organ | 1.06e-08 | 31 |
subdivision of trunk | 1.80e-08 | 112 |
larynx | 5.11e-08 | 9 |
excretory tube | 5.33e-08 | 16 |
kidney epithelium | 5.33e-08 | 16 |
cortex | 7.02e-08 | 15 |
abdominal segment of trunk | 8.45e-08 | 60 |
abdomen | 8.45e-08 | 60 |
nephron epithelium | 1.24e-07 | 15 |
renal tubule | 1.24e-07 | 15 |
nephron tubule | 1.24e-07 | 15 |
nephron | 1.24e-07 | 15 |
uriniferous tubule | 1.24e-07 | 15 |
nephrogenic mesenchyme | 1.24e-07 | 15 |
kidney | 2.42e-07 | 26 |
kidney mesenchyme | 2.42e-07 | 26 |
upper urinary tract | 2.42e-07 | 26 |
kidney rudiment | 2.42e-07 | 26 |
kidney field | 2.42e-07 | 26 |
renal system | 3.11e-07 | 48 |
parenchyma | 3.96e-07 | 15 |
cortex of kidney | 5.00e-07 | 12 |
renal parenchyma | 5.00e-07 | 12 |
urinary system structure | 9.59e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.07e-16 | 143 |
cancer | 2.14e-16 | 235 |
disease of cellular proliferation | 3.15e-16 | 239 |
carcinoma | 3.41e-15 | 106 |
adenocarcinoma | 2.20e-07 | 25 |