FFCP PHASE1:Hg19::chr7:116200671..116200735,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=857 | |EntrezGene=857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1527 | |HGNC=1527 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=195bp_to_AL133639_5end | |association_with_transcript=195bp_to_AL133639_5end | ||
|cluster_id=chr7:116200671..116200735,+ | |||
|coexpression_cluster_id=C2875 | |coexpression_cluster_id=C2875 | ||
|description=CAGE_peak_8_at_CAV1_5end | |description=CAGE_peak_8_at_CAV1_5end | ||
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|ontology_enrichment_celltype=CL:0000222!2.72e-12!119;CL:0000220!2.57e-11!246;CL:0000055!3.50e-11!180;CL:0002321!5.16e-11!248;CL:0000057!2.67e-08!75;CL:0002139!1.79e-07!24;CL:0000680!2.40e-07!57;CL:0000056!2.40e-07!57;CL:0000355!2.40e-07!57;CL:0000076!2.75e-07!62;CL:0000213!8.23e-07!57;CL:0000215!8.23e-07!57 | |ontology_enrichment_celltype=CL:0000222!2.72e-12!119;CL:0000220!2.57e-11!246;CL:0000055!3.50e-11!180;CL:0002321!5.16e-11!248;CL:0000057!2.67e-08!75;CL:0002139!1.79e-07!24;CL:0000680!2.40e-07!57;CL:0000056!2.40e-07!57;CL:0000355!2.40e-07!57;CL:0000076!2.75e-07!62;CL:0000213!8.23e-07!57;CL:0000215!8.23e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.54e-08;24 | |ontology_enrichment_celltype_v019=CL:0002139;3.54e-08;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.00e-09,121;CL:0002139,3.76e-08,24;CL:0000136,6.37e-08,15;CL:0000213,3.09e-07,58;CL:0000215,3.09e-07,58;CL:0002321,8.80e-07,250 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.03e-11!83;UBERON:0002329!1.03e-11!83;UBERON:0003077!1.03e-11!83;UBERON:0003059!1.03e-11!83;UBERON:0007282!1.03e-11!83;UBERON:0009618!1.03e-11!83;UBERON:0007285!1.03e-11!83;UBERON:0000486!2.53e-11!82;UBERON:0004290!6.90e-10!70;UBERON:0003102!1.33e-09!95;UBERON:0000055!3.87e-09!69;UBERON:0002049!5.51e-09!79;UBERON:0007798!5.51e-09!79;UBERON:0002385!2.17e-08!63;UBERON:0001015!2.17e-08!63;UBERON:0000383!2.17e-08!63;UBERON:0001134!3.41e-08!61;UBERON:0002036!3.41e-08!61;UBERON:0003082!3.41e-08!61;UBERON:0000490!2.14e-07!138;UBERON:0000468!3.37e-07!659;UBERON:0002100!5.12e-07!216;UBERON:0001981!6.55e-07!60;UBERON:0007500!6.55e-07!60;UBERON:0004537!6.55e-07!60;UBERON:0006965!6.55e-07!60;UBERON:0004872!9.42e-07!84 | |ontology_enrichment_uberon=UBERON:0000914!1.03e-11!83;UBERON:0002329!1.03e-11!83;UBERON:0003077!1.03e-11!83;UBERON:0003059!1.03e-11!83;UBERON:0007282!1.03e-11!83;UBERON:0009618!1.03e-11!83;UBERON:0007285!1.03e-11!83;UBERON:0000486!2.53e-11!82;UBERON:0004290!6.90e-10!70;UBERON:0003102!1.33e-09!95;UBERON:0000055!3.87e-09!69;UBERON:0002049!5.51e-09!79;UBERON:0007798!5.51e-09!79;UBERON:0002385!2.17e-08!63;UBERON:0001015!2.17e-08!63;UBERON:0000383!2.17e-08!63;UBERON:0001134!3.41e-08!61;UBERON:0002036!3.41e-08!61;UBERON:0003082!3.41e-08!61;UBERON:0000490!2.14e-07!138;UBERON:0000468!3.37e-07!659;UBERON:0002100!5.12e-07!216;UBERON:0001981!6.55e-07!60;UBERON:0007500!6.55e-07!60;UBERON:0004537!6.55e-07!60;UBERON:0006965!6.55e-07!60;UBERON:0004872!9.42e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;8.18e-07;31!UBERON:0001015;8.18e-07;31!UBERON:0000383;8.18e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0002385;8.18e-07;31!UBERON:0001015;8.18e-07;31!UBERON:0000383;8.18e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.68e-09,99;UBERON:0000486,5.14e-08,83;UBERON:0007503,5.07e-07,78;UBERON:0002199,5.87e-07,46;UBERON:0002416,5.87e-07,46;UBERON:0007524,8.25e-07,73;UBERON:0004923,8.49e-07,66 | |||
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| ||
|short_description=p8@CAV1 | |short_description=p8@CAV1 | ||
}} | }} |
Latest revision as of 07:35, 25 September 2015
Short description: | p8@CAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CAV1_5end |
Coexpression cluster: | C2875_Wilms_epithelioid_pharyngeal_neuroectodermal_Olfactory_Mesenchymal_lung |
Association with transcript: | 195bp_to_AL133639_5end |
EntrezGene: | CAV1 |
HGNC: | 1527 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.00e-09 | 121 |
endothelial cell of vascular tree | 3.76e-08 | 24 |
fat cell | 6.37e-08 | 15 |
lining cell | 3.09e-07 | 58 |
barrier cell | 3.09e-07 | 58 |
embryonic cell | 8.80e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.68e-09 | 99 |
multilaminar epithelium | 5.14e-08 | 83 |
epithelial vesicle | 5.07e-07 | 78 |
integument | 5.87e-07 | 46 |
integumental system | 5.87e-07 | 46 |
dense mesenchyme tissue | 8.25e-07 | 73 |
organ component layer | 8.49e-07 | 66 |