FFCP PHASE1:Mm9::chr5:136108551..136108564,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215160 | |EntrezGene=215160 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=747 | |MCL_coexpression_id=747 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENSMUST00000130647_5end | |association_with_transcript=-9bp_to_ENSMUST00000130647_5end | ||
|cluster_id=chr5:136108551..136108564,+ | |||
|description=CAGE_peak_3_at_Rhbdd2_5end | |description=CAGE_peak_3_at_Rhbdd2_5end | ||
|id=chr5:136108551..136108564,+ | |id=chr5:136108551..136108564,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.95e-12!44;CL:0000133!1.95e-12!44;CL:0002321!3.18e-12!70;CL:0000220!3.18e-12!70;CL:0002319!3.46e-12!43;CL:0000117!1.15e-11!23;CL:0000337!1.15e-11!23;CL:0000055!5.85e-11!50;CL:0000144!4.57e-09!121;CL:0000012!4.57e-09!121;CL:0000540!6.08e-09!33;CL:0000047!6.08e-09!33;CL:0000031!6.08e-09!33;CL:0000404!6.08e-09!33;CL:0000548!1.71e-08!115;CL:0000004!1.71e-08!115;CL:0000255!1.71e-08!115;CL:0000393!2.05e-08!39;CL:0000211!2.05e-08!39;CL:0002371!4.07e-08!118 | |ontology_enrichment_celltype=CL:0000221!1.95e-12!44;CL:0000133!1.95e-12!44;CL:0002321!3.18e-12!70;CL:0000220!3.18e-12!70;CL:0002319!3.46e-12!43;CL:0000117!1.15e-11!23;CL:0000337!1.15e-11!23;CL:0000055!5.85e-11!50;CL:0000144!4.57e-09!121;CL:0000012!4.57e-09!121;CL:0000540!6.08e-09!33;CL:0000047!6.08e-09!33;CL:0000031!6.08e-09!33;CL:0000404!6.08e-09!33;CL:0000548!1.71e-08!115;CL:0000004!1.71e-08!115;CL:0000255!1.71e-08!115;CL:0000393!2.05e-08!39;CL:0000211!2.05e-08!39;CL:0002371!4.07e-08!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.48e-30,23;CL:0000337,1.48e-30,23;CL:0002319,2.66e-23,43;CL:0000221,1.16e-22,44;CL:0000133,1.16e-22,44;CL:0000540,4.31e-20,33;CL:0000047,4.31e-20,33;CL:0000031,4.31e-20,33;CL:0000404,4.31e-20,33;CL:0002321,1.68e-18,70;CL:0000393,2.16e-16,39;CL:0000211,2.16e-16,39;CL:0002614,1.67e-09,3;CL:0000723,1.73e-09,91;CL:0000048,1.73e-09,91;CL:0002612,7.80e-09,3;CL:0000034,1.35e-08,97;CL:0000878,7.62e-07,2;CL:0000129,7.62e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.19e-17!75;UBERON:0001016!3.19e-17!75;UBERON:0001017!6.66e-17!73;UBERON:0005743!6.66e-17!73;UBERON:0001049!1.14e-14!52;UBERON:0005068!1.14e-14!52;UBERON:0006241!1.14e-14!52;UBERON:0007135!1.14e-14!52;UBERON:0004121!8.57e-14!102;UBERON:0000924!8.57e-14!102;UBERON:0006601!8.57e-14!102;UBERON:0000955!6.34e-13!50;UBERON:0006238!6.34e-13!50;UBERON:0002346!1.73e-12!71;UBERON:0003075!1.73e-12!71;UBERON:0007284!1.73e-12!71;UBERON:0002616!2.43e-12!49;UBERON:0002020!6.15e-12!34;UBERON:0000033!3.07e-11!63;UBERON:0003080!3.05e-10!40;UBERON:0002780!8.06e-10!39;UBERON:0001890!8.06e-10!39;UBERON:0006240!8.06e-10!39;UBERON:0003056!4.22e-09!49;UBERON:0002791!7.69e-09!29;UBERON:0003528!7.69e-09!29;UBERON:0001893!7.69e-09!29;UBERON:0007811!8.65e-07!86 | |ontology_enrichment_uberon=UBERON:0000073!3.19e-17!75;UBERON:0001016!3.19e-17!75;UBERON:0001017!6.66e-17!73;UBERON:0005743!6.66e-17!73;UBERON:0001049!1.14e-14!52;UBERON:0005068!1.14e-14!52;UBERON:0006241!1.14e-14!52;UBERON:0007135!1.14e-14!52;UBERON:0004121!8.57e-14!102;UBERON:0000924!8.57e-14!102;UBERON:0006601!8.57e-14!102;UBERON:0000955!6.34e-13!50;UBERON:0006238!6.34e-13!50;UBERON:0002346!1.73e-12!71;UBERON:0003075!1.73e-12!71;UBERON:0007284!1.73e-12!71;UBERON:0002616!2.43e-12!49;UBERON:0002020!6.15e-12!34;UBERON:0000033!3.07e-11!63;UBERON:0003080!3.05e-10!40;UBERON:0002780!8.06e-10!39;UBERON:0001890!8.06e-10!39;UBERON:0006240!8.06e-10!39;UBERON:0003056!4.22e-09!49;UBERON:0002791!7.69e-09!29;UBERON:0003528!7.69e-09!29;UBERON:0001893!7.69e-09!29;UBERON:0007811!8.65e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.55e-19,75;UBERON:0001017,9.03e-18,73;UBERON:0002020,1.40e-16,34;UBERON:0001948,6.41e-14,5;UBERON:0002315,6.41e-14,5;UBERON:0000073,1.02e-13,54;UBERON:0004121,1.38e-13,95;UBERON:0000924,1.38e-13,95;UBERON:0006601,1.38e-13,95;UBERON:0002240,1.54e-11,6;UBERON:0005174,1.54e-11,6;UBERON:0001137,1.54e-11,6;UBERON:0001049,5.70e-11,52;UBERON:0005068,5.70e-11,52;UBERON:0006241,5.70e-11,52;UBERON:0007135,5.70e-11,52;UBERON:0002038,1.67e-09,3;UBERON:0009663,1.67e-09,3;UBERON:0009661,1.67e-09,3;UBERON:0000125,1.67e-09,3;UBERON:0002308,1.67e-09,3;UBERON:0002257,7.80e-09,3;UBERON:0003528,9.62e-09,29;UBERON:0002791,9.62e-09,29;UBERON:0001893,9.62e-09,29;UBERON:0002420,1.72e-08,8;UBERON:0007245,1.72e-08,8;UBERON:0010009,1.72e-08,8;UBERON:0010011,1.72e-08,8;UBERON:0000454,1.72e-08,8;UBERON:0002346,3.27e-08,64;UBERON:0003075,3.27e-08,64;UBERON:0007284,3.27e-08,64;UBERON:0003076,1.22e-07,12;UBERON:0003057,1.22e-07,12;UBERON:0002950,3.33e-07,4;UBERON:0001891,3.33e-07,4;UBERON:0009616,3.33e-07,4;UBERON:0010286,3.33e-07,4;UBERON:0010371,9.48e-07,73 | |||
|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,0.30246421130683,0,0.16787927191189,0.233612640595526,0.258246646883153,0.281577444303333,0,0.171217968225505,0.0797721589953364,0.513602189793617,0.437102012094987,0,0.202475267389826,0,0.315462165358238,0,0,1.10556277196391,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,1.7230479846363,0.430942465371778,0.380046838912748,0.252030129759931,0,0.635030673459631,0,0,0,0.332469290716985,0.408338712524738,0,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0.101376931219515,0.734187008646726,0.782391344348039,0.436050312760893,0.878744730937887,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,1.41621522601718,0,2.53532561402472,0,0,0.449949858640699,0,1.4209602298922,3.59520132622086,6.14749288514487,1.34796496001021,1.08004750665353,0.630974884054146,3.71346279724945,3.97563373712904,0.61245399607477,1.15014565221884,0.919218786610021,0,5.10749352340751,3.99376986466233,1.05509030184155,2.56165402086747,0.52091337055676,4.18774498502071,3.93933827022176,5.34793867218835,4.71405736757868,2.70506193518296,1.3047961207771,1.13589289999776,0.151143120213571,0.289864488701678,0,1.3599426674155,1.07940638327563,0,0.896053774194671,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.649473123033642,1.01343946190039,1.51657333504435,0.79928715803342,0,0.593768556259299,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0.376999773989026,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,1.25668024088073,0,0.239630249011841,0.599902730993408,0.381210681219194,0.748953197024114,0.457500602818626,0.376963056338593,0.695297280769106,0.255715457330331,0.83115217823824,0.648965052271031,0.101839363850316,0,0,0,0.260240885925407,0,0.180062129805349,0.60281927134286,0.340182495756639,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0.257347907114715,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0,0.841159794256509,0.411618449517138,0,0.528901133327089,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0,0.228497025219458,0,0,0.387904974335251,0.140271639780637,0.316182685621286,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0.54390568381871,0,0.275936746304732,0.481651769963376,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0.395287777946524,1.60660658210904,0,0,0.488660878060728,0,0,0.242780636154981,0,0.377210159511796,0,0.922305443831782,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.388076051348264,0,0.354680467284547,0.356737635204141,0.987294123612726,0.913394847343798,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,0.170870880797853,0,0,0,0,0.228778173206523,0.679913719975421,0.839708713941948,0.552799895217695,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.218362563746178,0,0,0,0.259229946583586,0,1.12738587736838,0.149516546043979,0,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0.104859344425711,0.241584120826006,1.44015003128933,0,0.405450430580328,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.590758108698309,0,0,0.100826185136841,0,0.0962118416403295,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,0,1.84130094602871,0.572895513439397,2.06223818812425,0,0.755393897389701,0,0,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.468207537349412,0.512201219238954,0.574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0,0.394017929502254,0,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421 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|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,0.30246421130683,0,0.16787927191189,0.233612640595526,0.258246646883153,0.281577444303333,0,0.171217968225505,0.0797721589953364,0.513602189793617,0.437102012094987,0,0.202475267389826,0,0.315462165358238,0,0,1.10556277196391,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,1.7230479846363,0.430942465371778,0.380046838912748,0.252030129759931,0,0.635030673459631,0,0,0,0.332469290716985,0.408338712524738,0,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0.101376931219515,0.734187008646726,0.782391344348039,0.436050312760893,0.878744730937887,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,1.41621522601718,0,2.53532561402472,0,0,0.449949858640699,0,1.4209602298922,3.59520132622086,6.14749288514487,1.34796496001021,1.08004750665353,0.630974884054146,3.71346279724945,3.97563373712904,0.61245399607477,1.15014565221884,0.919218786610021,0,5.10749352340751,3.99376986466233,1.05509030184155,2.56165402086747,0.52091337055676,4.18774498502071,3.93933827022176,5.34793867218835,4.71405736757868,2.70506193518296,1.3047961207771,1.13589289999776,0.151143120213571,0.289864488701678,0,1.3599426674155,1.07940638327563,0,0.896053774194671,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.649473123033642,1.01343946190039,1.51657333504435,0.79928715803342,0,0.593768556259299,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0.376999773989026,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,1.25668024088073,0,0.239630249011841,0.599902730993408,0.381210681219194,0.748953197024114,0.457500602818626,0.376963056338593,0.695297280769106,0.255715457330331,0.83115217823824,0.648965052271031,0.101839363850316,0,0,0,0.260240885925407,0,0.180062129805349,0.60281927134286,0.340182495756639,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0.257347907114715,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0,0.841159794256509,0.411618449517138,0,0.528901133327089,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0,0.228497025219458,0,0,0.387904974335251,0.140271639780637,0.316182685621286,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0.54390568381871,0,0.275936746304732,0.481651769963376,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0.395287777946524,1.60660658210904,0,0,0.488660878060728,0,0,0.242780636154981,0,0.377210159511796,0,0.922305443831782,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.388076051348264,0,0.354680467284547,0.356737635204141,0.987294123612726,0.913394847343798,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,0.170870880797853,0,0,0,0,0.228778173206523,0.679913719975421,0.839708713941948,0.552799895217695,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.218362563746178,0,0,0,0.259229946583586,0,1.12738587736838,0.149516546043979,0,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0.104859344425711,0.241584120826006,1.44015003128933,0,0.405450430580328,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.590758108698309,0,0,0.100826185136841,0,0.0962118416403295,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,0,1.84130094602871,0.572895513439397,2.06223818812425,0,0.755393897389701,0,0,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.468207537349412,0.512201219238954,0.574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0,0.394017929502254,0,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421 | ||
|short_description=p3@Rhbdd2 | |short_description=p3@Rhbdd2 | ||
}} | }} |
Latest revision as of 13:28, 25 September 2015
Short description: | p3@Rhbdd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rhbdd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:747 |
Association with transcript: | -9bp_to_ENSMUST00000130647_5end |
EntrezGene: | Rhbdd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.48e-30 | 23 |
neuroblast (sensu Vertebrata) | 1.48e-30 | 23 |
neural cell | 2.66e-23 | 43 |
ectodermal cell | 1.16e-22 | 44 |
neurectodermal cell | 1.16e-22 | 44 |
neuron | 4.31e-20 | 33 |
neuronal stem cell | 4.31e-20 | 33 |
neuroblast | 4.31e-20 | 33 |
electrically signaling cell | 4.31e-20 | 33 |
embryonic cell | 1.68e-18 | 70 |
electrically responsive cell | 2.16e-16 | 39 |
electrically active cell | 2.16e-16 | 39 |
neuron of the substantia nigra | 1.67e-09 | 3 |
somatic stem cell | 1.73e-09 | 91 |
multi fate stem cell | 1.73e-09 | 91 |
neuron of the ventral spinal cord | 7.80e-09 | 3 |
stem cell | 1.35e-08 | 97 |
central nervous system macrophage | 7.62e-07 | 2 |
microglial cell | 7.62e-07 | 2 |