FFCP PHASE1:Mm9::chr5:137462706..137462748,-: Difference between revisions
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{{FFCP|EntrezGene=70103|HGNC=|MCL_coexpression_id=0|UniProt=Q8R331|association_with_transcript=0bp_to_uc009abh.1_5end|description=CAGE_peak_2_at_Znhit1_5end|id=chr5:137462706..137462748,-|ontology_enrichment_celltype=CL:0002319!7.30e-17!43;CL:0000221!2.78e-16!44;CL:0000133!2.78e-16!44;CL:0000055!5.59e-16!50;CL:0002371!2.18e-14!118;CL:0002321!6.26e-14!70;CL:0000220!6.26e-14!70;CL:0000144!4.82e-13!121;CL:0000012!4.82e-13!121;CL:0000548!7.02e-13!115;CL:0000004!7.02e-13!115;CL:0000255!7.02e-13!115;CL:0000540!1.35e-12!33;CL:0000047!1.35e-12!33;CL:0000031!1.35e-12!33;CL:0000404!1.35e-12!33;CL:0000393!1.76e-11!39;CL:0000211!1.76e-11!39;CL:0000723!3.00e-10!91;CL:0000048!3.00e-10!91;CL:0000117!3.84e-10!23;CL:0000337!3.84e-10!23;CL:0000034!7.16e-09!97|ontology_enrichment_celltype_v019_2=CL:0002319,7.30e-17,43;CL:0000221,2.78e-16,44;CL:0000133,2.78e-16,44;CL:0002321,6.26e-14,70;CL:0000540,1.35e-12,33;CL:0000047,1.35e-12,33;CL:0000031,1.35e-12,33;CL:0000404,1.35e-12,33;CL:0000393,1.76e-11,39;CL:0000211,1.76e-11,39;CL:0000723,3.00e-10,91;CL:0000048,3.00e-10,91;CL:0000117,3.84e-10,23;CL:0000337,3.84e-10,23;CL:0000034,7.16e-09,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.48e-18!73;UBERON:0005743!2.48e-18!73;UBERON:0000073!5.23e-18!75;UBERON:0001016!5.23e-18!75;UBERON:0004121!6.76e-12!102;UBERON:0000924!6.76e-12!102;UBERON:0006601!6.76e-12!102;UBERON:0001049!5.09e-11!52;UBERON:0005068!5.09e-11!52;UBERON:0006241!5.09e-11!52;UBERON:0007135!5.09e-11!52;UBERON:0002346!4.96e-10!71;UBERON:0003075!4.96e-10!71;UBERON:0007284!4.96e-10!71;UBERON:0002616!6.34e-10!49;UBERON:0000955!2.22e-09!50;UBERON:0006238!2.22e-09!50;UBERON:0000033!4.88e-08!63;UBERON:0003080!5.17e-07!40;UBERON:0002780!9.75e-07!39;UBERON:0001890!9.75e-07!39;UBERON:0006240!9.75e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.48e-18,73;UBERON:0001016,5.23e-18,75;UBERON:0004121,2.10e-12,95;UBERON:0000924,2.10e-12,95;UBERON:0006601,2.10e-12,95;UBERON:0000073,5.70e-12,54;UBERON:0001049,5.09e-11,52;UBERON:0005068,5.09e-11,52;UBERON:0006241,5.09e-11,52;UBERON:0007135,5.09e-11,52;UBERON:0002346,9.22e-11,64;UBERON:0003075,9.22e-11,64;UBERON:0007284,9.22e-11,64;UBERON:0010314,1.64e-09,92;UBERON:0002616,1.16e-08,46;UBERON:0000955,3.75e-08,47;UBERON:0006238,3.75e-08,47;UBERON:0010371,1.78e-07,73;UBERON:0003080,5.17e-07,40;UBERON:0002780,9.75e-07,39;UBERON:0001890,9.75e-07,39;UBERON:0006240,9.75e-07,39|phase1_expression=14.4133962394315,27.9180326111489,22.7499619694768,26.3143863836942,21.0376206577466,20.4812711732506,19.8570744506197,25.6955413648737,0.84473233291,3.27690336850791,3.08192342805909,5.34473465268754,14.3808613142213,27.7122675668222,18.9872564234928,14.7806945194573,10.4934281719222,11.3566379528966,11.9289557236993,13.1560792057389,214.139004600394,19.9574811913779,24.5527801790599,22.0789543454901,18.5821517664408,24.6919744569459,24.1226717849082,20.6852383378453,24.7030445293286,22.1786514188739,23.0599731081517,33.6566256933605,39.9792111929971,31.6963362030877,7.79899373328441,9.64160943079256,7.55426618170766,62.7797446105362,66.413504284523,44.4995182377729,71.1760100517527,82.6485036799719,74.7685943667977,21.9060463277504,19.1602400004883,15.2343804294196,88.4102219113284,77.616955671439,52.7246838562732,49.9684840620908,41.8559400659834,51.7509231713898,7.21465206048266,9.42970784614748,11.7632829699862,14.1492689819771,20.3438742356517,13.9231464914909,35.0007477287104,34.9134046319542,35.494558596346,27.1075625655306,22.2323699027785,13.0485459005803,27.6882581518753,14.9200824138681,45.5392167987975,102.202069215534,20.7379224616955,19.7108669964268,27.9732198597338,51.4171771926846,58.0884262702744,26.8254850280749,24.8239769937232,29.4150011715207,55.0579404996944,29.3680877595932,35.7903222487047,35.0817525362316,33.941915776494,33.8593690861894,46.3443778342292,37.7050948721226,34.9907987408895,26.5165726926301,31.1793980950035,29.2647129945722,11.2074766133112,23.5783267533171,9.56552812715537,25.8127163094416,18.3592260101093,47.4938808641279,37.6870322119648,29.5697745484241,83.4239855582606,15.1682987094471,22.3415963958467,26.5004680882755,13.661811718338,41.0644727725817,71.3454671178608,63.9960032837998,6.27824018932521,6.58735650235256,9.0994400102661,62.801133845483,15.2773351351831,15.5864246018066,20.8182392119363,23.4438418300349,15.912469310668,11.6056433225519,7.64326596382081,21.7403203000339,2.96633961281249,18.9425157565084,19.4614321428972,15.0443170451091,19.654895142975,17.9403843660032,5.59175283654366,18.4451902117275,16.3368431314495,10.7291963187608,14.6174451897223,38.9936775145715,18.1710424714483,27.2618963716777,16.0125210986519,8.41884159156192,16.5133104182663,12.7857728665165,36.1551197533635,22.5515355664183,6.11036183101898,14.3068016201607,17.9433158487909,19.3606507415556,17.1758984710769,19.3117767724117,19.8068342785884,13.1113191517072,10.6817303667585,12.2989171473456,14.9922759295566,17.074422468775,17.2454394346274,11.724576970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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70103 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R331 | |||
|association_with_transcript=0bp_to_uc009abh.1_5end | |||
|cluster_id=chr5:137462706..137462748,- | |||
|description=CAGE_peak_2_at_Znhit1_5end | |||
|id=chr5:137462706..137462748,- | |||
|ontology_enrichment_celltype=CL:0002319!7.30e-17!43;CL:0000221!2.78e-16!44;CL:0000133!2.78e-16!44;CL:0000055!5.59e-16!50;CL:0002371!2.18e-14!118;CL:0002321!6.26e-14!70;CL:0000220!6.26e-14!70;CL:0000144!4.82e-13!121;CL:0000012!4.82e-13!121;CL:0000548!7.02e-13!115;CL:0000004!7.02e-13!115;CL:0000255!7.02e-13!115;CL:0000540!1.35e-12!33;CL:0000047!1.35e-12!33;CL:0000031!1.35e-12!33;CL:0000404!1.35e-12!33;CL:0000393!1.76e-11!39;CL:0000211!1.76e-11!39;CL:0000723!3.00e-10!91;CL:0000048!3.00e-10!91;CL:0000117!3.84e-10!23;CL:0000337!3.84e-10!23;CL:0000034!7.16e-09!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.30e-17,43;CL:0000221,2.78e-16,44;CL:0000133,2.78e-16,44;CL:0002321,6.26e-14,70;CL:0000540,1.35e-12,33;CL:0000047,1.35e-12,33;CL:0000031,1.35e-12,33;CL:0000404,1.35e-12,33;CL:0000393,1.76e-11,39;CL:0000211,1.76e-11,39;CL:0000723,3.00e-10,91;CL:0000048,3.00e-10,91;CL:0000117,3.84e-10,23;CL:0000337,3.84e-10,23;CL:0000034,7.16e-09,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.48e-18!73;UBERON:0005743!2.48e-18!73;UBERON:0000073!5.23e-18!75;UBERON:0001016!5.23e-18!75;UBERON:0004121!6.76e-12!102;UBERON:0000924!6.76e-12!102;UBERON:0006601!6.76e-12!102;UBERON:0001049!5.09e-11!52;UBERON:0005068!5.09e-11!52;UBERON:0006241!5.09e-11!52;UBERON:0007135!5.09e-11!52;UBERON:0002346!4.96e-10!71;UBERON:0003075!4.96e-10!71;UBERON:0007284!4.96e-10!71;UBERON:0002616!6.34e-10!49;UBERON:0000955!2.22e-09!50;UBERON:0006238!2.22e-09!50;UBERON:0000033!4.88e-08!63;UBERON:0003080!5.17e-07!40;UBERON:0002780!9.75e-07!39;UBERON:0001890!9.75e-07!39;UBERON:0006240!9.75e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.48e-18,73;UBERON:0001016,5.23e-18,75;UBERON:0004121,2.10e-12,95;UBERON:0000924,2.10e-12,95;UBERON:0006601,2.10e-12,95;UBERON:0000073,5.70e-12,54;UBERON:0001049,5.09e-11,52;UBERON:0005068,5.09e-11,52;UBERON:0006241,5.09e-11,52;UBERON:0007135,5.09e-11,52;UBERON:0002346,9.22e-11,64;UBERON:0003075,9.22e-11,64;UBERON:0007284,9.22e-11,64;UBERON:0010314,1.64e-09,92;UBERON:0002616,1.16e-08,46;UBERON:0000955,3.75e-08,47;UBERON:0006238,3.75e-08,47;UBERON:0010371,1.78e-07,73;UBERON:0003080,5.17e-07,40;UBERON:0002780,9.75e-07,39;UBERON:0001890,9.75e-07,39;UBERON:0006240,9.75e-07,39 | |||
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| |||
|short_description=p2@Znhit1 | |||
}} |
Latest revision as of 14:17, 25 September 2015
Short description: | p2@Znhit1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Znhit1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_uc009abh.1_5end |
EntrezGene: | Znhit1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.30e-17 | 43 |
ectodermal cell | 2.78e-16 | 44 |
neurectodermal cell | 2.78e-16 | 44 |
embryonic cell | 6.26e-14 | 70 |
neuron | 1.35e-12 | 33 |
neuronal stem cell | 1.35e-12 | 33 |
neuroblast | 1.35e-12 | 33 |
electrically signaling cell | 1.35e-12 | 33 |
electrically responsive cell | 1.76e-11 | 39 |
electrically active cell | 1.76e-11 | 39 |
somatic stem cell | 3.00e-10 | 91 |
multi fate stem cell | 3.00e-10 | 91 |
CNS neuron (sensu Vertebrata) | 3.84e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.84e-10 | 23 |
stem cell | 7.16e-09 | 97 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.48e-18 | 73 |
nervous system | 5.23e-18 | 75 |
ectoderm-derived structure | 2.10e-12 | 95 |
ectoderm | 2.10e-12 | 95 |
presumptive ectoderm | 2.10e-12 | 95 |
regional part of nervous system | 5.70e-12 | 54 |
neural tube | 5.09e-11 | 52 |
neural rod | 5.09e-11 | 52 |
future spinal cord | 5.09e-11 | 52 |
neural keel | 5.09e-11 | 52 |
neurectoderm | 9.22e-11 | 64 |
neural plate | 9.22e-11 | 64 |
presumptive neural plate | 9.22e-11 | 64 |
structure with developmental contribution from neural crest | 1.64e-09 | 92 |
regional part of brain | 1.16e-08 | 46 |
brain | 3.75e-08 | 47 |
future brain | 3.75e-08 | 47 |
ecto-epithelium | 1.78e-07 | 73 |
anterior neural tube | 5.17e-07 | 40 |
regional part of forebrain | 9.75e-07 | 39 |
forebrain | 9.75e-07 | 39 |
future forebrain | 9.75e-07 | 39 |