FFCP PHASE1:Mm9::chr2:120070813..120070841,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=329502 | |EntrezGene=329502 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=159 | |MCL_coexpression_id=159 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000127009_5end | |association_with_transcript=0bp_to_ENSMUST00000127009_5end | ||
|cluster_id=chr2:120070813..120070841,- | |||
|description=CAGE_peak_2_at_Pla2g4e_5end | |description=CAGE_peak_2_at_Pla2g4e_5end | ||
|id=chr2:120070813..120070841,- | |id=chr2:120070813..120070841,- | ||
|ontology_enrichment_celltype=CL:0000117!5.07e-17!23;CL:0000337!5.07e-17!23;CL:0000540!5.88e-10!33;CL:0000047!5.88e-10!33;CL:0000031!5.88e-10!33;CL:0000404!5.88e-10!33;CL:0000393!3.85e-07!39;CL:0000211!3.85e-07!39 | |ontology_enrichment_celltype=CL:0000117!5.07e-17!23;CL:0000337!5.07e-17!23;CL:0000540!5.88e-10!33;CL:0000047!5.88e-10!33;CL:0000031!5.88e-10!33;CL:0000404!5.88e-10!33;CL:0000393!3.85e-07!39;CL:0000211!3.85e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.98e-27,23;CL:0000337,5.98e-27,23;CL:0000540,3.93e-17,33;CL:0000047,3.93e-17,33;CL:0000031,3.93e-17,33;CL:0000404,3.93e-17,33;CL:0000393,1.11e-13,39;CL:0000211,1.11e-13,39;CL:0002319,6.31e-12,43;CL:0000221,1.54e-11,44;CL:0000133,1.54e-11,44;CL:0002610,2.64e-07,3;CL:0002614,3.79e-07,3;CL:0002612,9.13e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.55e-19!52;UBERON:0005068!1.55e-19!52;UBERON:0006241!1.55e-19!52;UBERON:0007135!1.55e-19!52;UBERON:0002020!3.38e-19!34;UBERON:0000955!3.36e-18!50;UBERON:0006238!3.36e-18!50;UBERON:0001017!8.56e-18!73;UBERON:0005743!8.56e-18!73;UBERON:0000073!1.70e-17!75;UBERON:0001016!1.70e-17!75;UBERON:0002616!1.74e-17!49;UBERON:0000033!2.38e-17!63;UBERON:0002791!5.15e-15!29;UBERON:0003528!5.15e-15!29;UBERON:0001893!5.15e-15!29;UBERON:0004121!8.09e-15!102;UBERON:0000924!8.09e-15!102;UBERON:0006601!8.09e-15!102;UBERON:0002346!1.18e-14!71;UBERON:0003075!1.18e-14!71;UBERON:0007284!1.18e-14!71;UBERON:0003080!3.27e-13!40;UBERON:0002780!1.80e-12!39;UBERON:0001890!1.80e-12!39;UBERON:0006240!1.80e-12!39;UBERON:0003056!5.23e-12!49;UBERON:0000956!4.41e-09!21;UBERON:0001869!4.41e-09!21;UBERON:0000203!4.41e-09!21;UBERON:0002619!8.81e-09!17;UBERON:0002021!1.51e-08!10;UBERON:0000411!1.51e-08!10;UBERON:0001950!1.51e-08!10;UBERON:0007811!1.84e-08!86;UBERON:0000153!6.77e-08!94;UBERON:0002420!1.27e-07!8;UBERON:0007245!1.27e-07!8;UBERON:0010009!1.27e-07!8;UBERON:0010011!1.27e-07!8;UBERON:0000454!1.27e-07!8;UBERON:0003076!2.64e-07!12;UBERON:0003057!2.64e-07!12;UBERON:0004111!5.42e-07!122;UBERON:0000025!7.82e-07!114 | |ontology_enrichment_uberon=UBERON:0001049!1.55e-19!52;UBERON:0005068!1.55e-19!52;UBERON:0006241!1.55e-19!52;UBERON:0007135!1.55e-19!52;UBERON:0002020!3.38e-19!34;UBERON:0000955!3.36e-18!50;UBERON:0006238!3.36e-18!50;UBERON:0001017!8.56e-18!73;UBERON:0005743!8.56e-18!73;UBERON:0000073!1.70e-17!75;UBERON:0001016!1.70e-17!75;UBERON:0002616!1.74e-17!49;UBERON:0000033!2.38e-17!63;UBERON:0002791!5.15e-15!29;UBERON:0003528!5.15e-15!29;UBERON:0001893!5.15e-15!29;UBERON:0004121!8.09e-15!102;UBERON:0000924!8.09e-15!102;UBERON:0006601!8.09e-15!102;UBERON:0002346!1.18e-14!71;UBERON:0003075!1.18e-14!71;UBERON:0007284!1.18e-14!71;UBERON:0003080!3.27e-13!40;UBERON:0002780!1.80e-12!39;UBERON:0001890!1.80e-12!39;UBERON:0006240!1.80e-12!39;UBERON:0003056!5.23e-12!49;UBERON:0000956!4.41e-09!21;UBERON:0001869!4.41e-09!21;UBERON:0000203!4.41e-09!21;UBERON:0002619!8.81e-09!17;UBERON:0002021!1.51e-08!10;UBERON:0000411!1.51e-08!10;UBERON:0001950!1.51e-08!10;UBERON:0007811!1.84e-08!86;UBERON:0000153!6.77e-08!94;UBERON:0002420!1.27e-07!8;UBERON:0007245!1.27e-07!8;UBERON:0010009!1.27e-07!8;UBERON:0010011!1.27e-07!8;UBERON:0000454!1.27e-07!8;UBERON:0003076!2.64e-07!12;UBERON:0003057!2.64e-07!12;UBERON:0004111!5.42e-07!122;UBERON:0000025!7.82e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.01e-34,54;UBERON:0001017,2.48e-32,73;UBERON:0001016,3.36e-31,75;UBERON:0001049,6.35e-31,52;UBERON:0005068,6.35e-31,52;UBERON:0006241,6.35e-31,52;UBERON:0007135,6.35e-31,52;UBERON:0002020,7.14e-28,34;UBERON:0004121,7.55e-24,95;UBERON:0000924,7.55e-24,95;UBERON:0006601,7.55e-24,95;UBERON:0000955,1.42e-23,47;UBERON:0006238,1.42e-23,47;UBERON:0002346,1.75e-23,64;UBERON:0003075,1.75e-23,64;UBERON:0007284,1.75e-23,64;UBERON:0002616,2.61e-22,46;UBERON:0003528,3.70e-20,29;UBERON:0002791,3.70e-20,29;UBERON:0001893,3.70e-20,29;UBERON:0010371,1.62e-19,73;UBERON:0003080,3.17e-18,40;UBERON:0002780,6.60e-17,39;UBERON:0001890,6.60e-17,39;UBERON:0006240,6.60e-17,39;UBERON:0002021,1.59e-15,10;UBERON:0000411,1.59e-15,10;UBERON:0001950,1.59e-15,10;UBERON:0010314,9.27e-15,92;UBERON:0003076,3.58e-14,12;UBERON:0003057,3.58e-14,12;UBERON:0003056,9.29e-14,49;UBERON:0002619,5.93e-12,17;UBERON:0002420,2.06e-11,8;UBERON:0007245,2.06e-11,8;UBERON:0010009,2.06e-11,8;UBERON:0010011,2.06e-11,8;UBERON:0000454,2.06e-11,8;UBERON:0002240,4.21e-11,6;UBERON:0005174,4.21e-11,6;UBERON:0001137,4.21e-11,6;UBERON:0000956,5.39e-11,21;UBERON:0001869,5.39e-11,21;UBERON:0000203,5.39e-11,21;UBERON:0001948,9.45e-10,5;UBERON:0002315,9.45e-10,5;UBERON:0000025,1.81e-09,114;UBERON:0004111,4.90e-09,122;UBERON:0002950,8.80e-09,4;UBERON:0001891,8.80e-09,4;UBERON:0009616,8.80e-09,4;UBERON:0010286,8.80e-09,4;UBERON:0004684,2.64e-07,3;UBERON:0002275,2.64e-07,3;UBERON:0002038,3.79e-07,3;UBERON:0009663,3.79e-07,3;UBERON:0009661,3.79e-07,3;UBERON:0000125,3.79e-07,3;UBERON:0002308,3.79e-07,3;UBERON:0002257,9.13e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,4.7609188134483,3.1691570175309,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,2.57085885963423,2.87129103237098,0.979926393719632,1.24599112323707,1.83843757322004,11.0115880999389,6.00130489000382,6.14426133024974,3.29715719325485,4.94033275453012,4.16730696445408,6.14202597803038,5.6276261003168,5.95913166329559,7.66034322231536,5.26775218956681,2.60959224155421,0,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0.608930956624282,0,0.150722640552623,0,0,0,0,0,0.647067399789637,0.883366073841574,0.484875253135222,0,5.5628351432194,3.14170060220183,0,0,0,0,3.44518470631092,0.457500602818626,1.00523481690292,2.9550134432687,2.55715457330331,2.28566849015516,1.78465389374533,0,0.497627882440372,0,0,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0.621377317606506,0,0,0.23674473558521,0.196764231747404,0.617068451549513,0.465067889500816,0.268273401399619,0.233530684734339,0.329119699826961,0.656669856316381,0.486412857275134,0.438599962275997,0.439100230582101,0.671032093801859,0.420579897128254,0.205809224758569,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,3.6335622843583,0,4.03953483526997,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.484393280087717,0.180938774784468,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,3.68260189205742,1.14579102687879,3.43706364687375,1.37016503954128,3.7769694869485,2.70009000092722,2.2516060161211,1.35942722695261,1.55328093525546,0,0,0,0.972426868273176,0.419226325255965,0.183843508450014,0.888986911206461,1.03017528619447,0.64183841918363,1.51618327058278,1.01391719956096,0.943131706930381,0.936415074698824,0.89635213366817,0.918967503289812,2.85776214769844,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,1.02860775715625,0.70990322463735,1.1921809497366,0.581385666529314,0.470546902076653,0.338458431566706,0.548783918618318,0.789209134313529,1.22223702461276,0,0.474540072496697,0.492522411877817,0.409231043169689,0.309873682371932,0.578719832943424,0,0.935726433781634,1.07435527024149,2.10417165275728,0.441182838239031,0 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|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,4.7609188134483,3.1691570175309,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,2.57085885963423,2.87129103237098,0.979926393719632,1.24599112323707,1.83843757322004,11.0115880999389,6.00130489000382,6.14426133024974,3.29715719325485,4.94033275453012,4.16730696445408,6.14202597803038,5.6276261003168,5.95913166329559,7.66034322231536,5.26775218956681,2.60959224155421,0,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0.608930956624282,0,0.150722640552623,0,0,0,0,0,0.647067399789637,0.883366073841574,0.484875253135222,0,5.5628351432194,3.14170060220183,0,0,0,0,3.44518470631092,0.457500602818626,1.00523481690292,2.9550134432687,2.55715457330331,2.28566849015516,1.78465389374533,0,0.497627882440372,0,0,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0.621377317606506,0,0,0.23674473558521,0.196764231747404,0.617068451549513,0.465067889500816,0.268273401399619,0.233530684734339,0.329119699826961,0.656669856316381,0.486412857275134,0.438599962275997,0.439100230582101,0.671032093801859,0.420579897128254,0.205809224758569,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,3.6335622843583,0,4.03953483526997,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.484393280087717,0.180938774784468,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,3.68260189205742,1.14579102687879,3.43706364687375,1.37016503954128,3.7769694869485,2.70009000092722,2.2516060161211,1.35942722695261,1.55328093525546,0,0,0,0.972426868273176,0.419226325255965,0.183843508450014,0.888986911206461,1.03017528619447,0.64183841918363,1.51618327058278,1.01391719956096,0.943131706930381,0.936415074698824,0.89635213366817,0.918967503289812,2.85776214769844,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,1.02860775715625,0.70990322463735,1.1921809497366,0.581385666529314,0.470546902076653,0.338458431566706,0.548783918618318,0.789209134313529,1.22223702461276,0,0.474540072496697,0.492522411877817,0.409231043169689,0.309873682371932,0.578719832943424,0,0.935726433781634,1.07435527024149,2.10417165275728,0.441182838239031,0 | ||
|short_description=p2@Pla2g4e | |short_description=p2@Pla2g4e | ||
}} | }} |
Latest revision as of 14:24, 25 September 2015
Short description: | p2@Pla2g4e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pla2g4e_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_ENSMUST00000127009_5end |
EntrezGene: | Pla2g4e |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.98e-27 | 23 |
neuroblast (sensu Vertebrata) | 5.98e-27 | 23 |
neuron | 3.93e-17 | 33 |
neuronal stem cell | 3.93e-17 | 33 |
neuroblast | 3.93e-17 | 33 |
electrically signaling cell | 3.93e-17 | 33 |
electrically responsive cell | 1.11e-13 | 39 |
electrically active cell | 1.11e-13 | 39 |
neural cell | 6.31e-12 | 43 |
ectodermal cell | 1.54e-11 | 44 |
neurectodermal cell | 1.54e-11 | 44 |
raphe nuclei neuron | 2.64e-07 | 3 |
neuron of the substantia nigra | 3.79e-07 | 3 |
neuron of the ventral spinal cord | 9.13e-07 | 3 |