FFCP PHASE1:Mm9::chr13:99660991..99661018,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=238799 | |EntrezGene=238799 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BFY9 | |UniProt=Q8BFY9 | ||
|association_with_transcript=0bp_to_ENSMUST00000109399,NM_001048267,uc007rpe.1_5end | |association_with_transcript=0bp_to_ENSMUST00000109399,NM_001048267,uc007rpe.1_5end | ||
|cluster_id=chr13:99660991..99661018,- | |||
|description=CAGE_peak_6_at_Tnpo1_5end | |description=CAGE_peak_6_at_Tnpo1_5end | ||
|id=chr13:99660991..99661018,- | |id=chr13:99660991..99661018,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.20e-07,9;CL:0000789,3.20e-07,9;CL:0002420,3.20e-07,9;CL:0002419,3.20e-07,9;CL:0000790,3.20e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.20e-12!29;UBERON:0002370!1.19e-10!23;UBERON:0000974!1.19e-10!23;UBERON:0004807!1.19e-10!23;UBERON:0005058!1.19e-10!23;UBERON:0003351!1.19e-10!23;UBERON:0009113!1.19e-10!23;UBERON:0003295!1.19e-10!23;UBERON:0009722!1.19e-10!23;UBERON:0005562!1.19e-10!23;UBERON:0007690!1.19e-10!23;UBERON:0006562!5.46e-10!24;UBERON:0001557!5.46e-10!24;UBERON:0001042!5.46e-10!24;UBERON:0008814!5.46e-10!24;UBERON:0009145!5.46e-10!24;UBERON:0003408!1.94e-09!24;UBERON:0001048!2.10e-09!147;UBERON:0005057!2.59e-09!51;UBERON:0000949!1.05e-07!72;UBERON:0002390!2.44e-07!45;UBERON:0003061!2.44e-07!45;UBERON:0001041!3.67e-07!92;UBERON:0000072!4.29e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.04e-14,29;UBERON:0005057,1.04e-14,29;UBERON:0002370,6.12e-13,23;UBERON:0000974,6.12e-13,23;UBERON:0004807,6.12e-13,23;UBERON:0005058,6.12e-13,23;UBERON:0003351,6.12e-13,23;UBERON:0009113,6.12e-13,23;UBERON:0003295,6.12e-13,23;UBERON:0009722,6.12e-13,23;UBERON:0005562,6.12e-13,23;UBERON:0007690,6.12e-13,23;UBERON:0006562,6.41e-12,24;UBERON:0003408,6.41e-12,24;UBERON:0001557,6.41e-12,24;UBERON:0001042,6.41e-12,24;UBERON:0008814,6.41e-12,24;UBERON:0009145,6.41e-12,24;UBERON:0000153,1.09e-10,43;UBERON:0000077,7.28e-10,35;UBERON:0002390,7.68e-10,45;UBERON:0003061,7.68e-10,45;UBERON:0007811,1.32e-09,36;UBERON:0000072,2.26e-09,27;UBERON:0002193,6.62e-09,48;UBERON:0002405,6.62e-09,48;UBERON:0000949,2.64e-08,72;UBERON:0001048,4.36e-07,134 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0.503637815735669,0.934450562382103,4.00282302668886,2.81577444303333,2.10658073689794,2.22583358693156,3.11111420081812,7.70403284690426,9.79108507092771,1.66554880907831,1.41732687172878,1.39912375625629,2.20823515750766,3.15363197293199,1.27316895539409,1.02051948181284,2.38298282882125,0.783599367416806,0.47997726838022,0.22940928106717,0,0.430761996159075,0.215471232685889,0,1.00812051903972,0.665191531965914,0,0,0,2.3108129580102,2.65975432573588,0.408338712524738,0,0,1.0470474879476,0,0,0,0.755380907853464,0.506884656097573,0.734187008646726,0.782391344348039,0,0,0.194429899074283,0.279972843250725,0,1.00669563634642,7.25362142011344,5.37750078627942,0.514518872071894,1.14613375975503,0,0,0,0,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,0.414758449233911,0.135005938331691,0.420649922702764,0.856952953211411,0.441737081903227,0.857435594504678,0.479227355091182,0,1.10115880999389,0.766124028511126,0.46081959976873,0.791317726381163,0.731901148819277,0.52091337055676,0.837548997004143,1.68828783009504,0.61119299110724,1.47314292736834,2.42031857358475,1.3047961207771,0.454357159999104,0.377857800533928,0.579728977403356,1.72084775396277,0,1.07940638327563,0,0,0.561777680527007,0.170430322578058,0.259786004602869,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0,0.253359865475099,0,1.02765491747154,1.29468941823586,0.445326417194474,1.56136794089522,0,1.15307748628029,0.753613202763113,0.705532242814229,0.502666365318702,0.494389935468748,0.578397427679647,0.884610551949874,1.13236794963186,0.441683036920787,1.45462575940567,1.86391761218122,0.585561594023094,0.83778682725382,1.02182822083437,2.03685711660064,1.19980546198682,1.65191295194984,0.898743836428936,0.915001205637253,1.13088916901578,0.521472960576829,0.511430914660661,0.62336413367868,0.973447578406546,1.01839363850316,0.995255764880744,1.0108910337347,0.631325567659422,1.43132487258974,2.29902104433473,1.26043490863744,1.35634336052144,1.49680298132921,1.15302348256365,1.12442069471675,0.776110112217047,2.37124792226126,1.70195472151037,0.703804496655795,2.41115305670332,2.22437799380478,1.0447564995665,1.23469281844766,1.99034266818493,0.702213187313235,0.257347907114715,1.42081749697796,2.27838349789052,1.17263029990548,1.62055855314913,1.42046841351126,0.983821158737019,1.3884040159864,1.86027155800326,0.804820204198858,0.817357396570186,0.493679549740441,0.492502392237286,0.243206428637567,0.730999937126662,0.658650345873152,1.20785776884335,0.420579897128254,0.823236899034275,0,0.528901133327089,1.2797295032114,1.16118335930219,1.9330119198314,1.21010114774006,1.11189021922435,0.951128130562796,1.42358718463353,0.823494773620054,1.50801125280162,0.994782360205754,1.16978452271472,0,0.432276099749388,0.597423819763102,2.0863469104839,2.05647322697512,0,1.4255592949172,0.193952487167626,1.68325967736765,0.885311519739602,0.295220295959204,0.627994911365499,0.493588655687202,0.296452627087149,2.33583148002532,2.94838492669805,2.9232074610031,1.62288097110802,2.65294875727659,1.2731292589071,0.863088412352432,0.810676133875177,1.09824565275233,7.18841032636773,1.48856379067401,1.24815069245824,0.757736633841335,0.538192240565737,0.964887042726734,0.184753190166605,1.51593129416388,0.814824882210129,2.03694102930226,0.938760993154008,2.01007508930179,0.952174563544055,0.780534591431195,0.788175720530955,1.55025282754142,0.956728611944923,0.81931657357869,1.03610989119537,1.01254341007058,0,0.54390568381871,0,1.37968373152366,0.481651769963376,0.586058432961016,0.163934945376675,0.252470927204373,0.94652465824877,0.390438744296638,1.07711698866399,0.716906393857656,0.891194696329576,0.849229592366497,2.83367491172426,0.584511715822624,1.18586333383957,0,0.425820255624806,1.24645922567079,2.44330439030364,0.989820737835213,5.30980553359851,1.21390318077491,1.81394134178851,1.69744571780308,1.77181135728464,1.22974059177571,1.80899805217755,1.09060118843252,2.13898427030833,3.16036757935816,3.16255825724996,0,1.02131881726136,0.540183282093931,0.905510786479282,0.643011105094777,1.59606210278046,1.78368817602071,0.987294123612726,0.913394847343798,0.938686832254841,0,0.661585194164886,0.8244312647074,1.77610869365496,2.17126529741361,1.67121281604391,1.14898629821543,0.874442509889552,0.18542530201051,1.53783792718067,1.23832120777933,2.22233432843654,3.01389531207506,1.6403307326523,1.83022538565218,1.5298058699447,1.6794174278839,1.52019971184866,0,2.05618395827738,1.01659733563424,2.05210147561422,1.46361807210128,0.655087691238533,0.809186078308924,0.41326727862668,0.26175594198403,0.518459893167171,0,0,1.79419855252775,2.48187735685646,1.94451188344048,2.0665571756437,1.68956125490778,1.64300134104056,1.8228613878153,2.41176492179135,1.20792060413003,0.288030006257865,6.95224465381992,3.44632865993279,3.90301637226344,6.75588279484534,7.16106782669926,6.95384741734427,8.29348601687785,7.23678683155428,7.87538309595551,10.440332511735,8.87270429204197,8.96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|phase1_expression=1.44133962394315,0,0,0,0,0.503637815735669,0.934450562382103,4.00282302668886,2.81577444303333,2.10658073689794,2.22583358693156,3.11111420081812,7.70403284690426,9.79108507092771,1.66554880907831,1.41732687172878,1.39912375625629,2.20823515750766,3.15363197293199,1.27316895539409,1.02051948181284,2.38298282882125,0.783599367416806,0.47997726838022,0.22940928106717,0,0.430761996159075,0.215471232685889,0,1.00812051903972,0.665191531965914,0,0,0,2.3108129580102,2.65975432573588,0.408338712524738,0,0,1.0470474879476,0,0,0,0.755380907853464,0.506884656097573,0.734187008646726,0.782391344348039,0,0,0.194429899074283,0.279972843250725,0,1.00669563634642,7.25362142011344,5.37750078627942,0.514518872071894,1.14613375975503,0,0,0,0,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,0.414758449233911,0.135005938331691,0.420649922702764,0.856952953211411,0.441737081903227,0.857435594504678,0.479227355091182,0,1.10115880999389,0.766124028511126,0.46081959976873,0.791317726381163,0.731901148819277,0.52091337055676,0.837548997004143,1.68828783009504,0.61119299110724,1.47314292736834,2.42031857358475,1.3047961207771,0.454357159999104,0.377857800533928,0.579728977403356,1.72084775396277,0,1.07940638327563,0,0,0.561777680527007,0.170430322578058,0.259786004602869,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0,0.253359865475099,0,1.02765491747154,1.29468941823586,0.445326417194474,1.56136794089522,0,1.15307748628029,0.753613202763113,0.705532242814229,0.502666365318702,0.494389935468748,0.578397427679647,0.884610551949874,1.13236794963186,0.441683036920787,1.45462575940567,1.86391761218122,0.585561594023094,0.83778682725382,1.02182822083437,2.03685711660064,1.19980546198682,1.65191295194984,0.898743836428936,0.915001205637253,1.13088916901578,0.521472960576829,0.511430914660661,0.62336413367868,0.973447578406546,1.01839363850316,0.995255764880744,1.0108910337347,0.631325567659422,1.43132487258974,2.29902104433473,1.26043490863744,1.35634336052144,1.49680298132921,1.15302348256365,1.12442069471675,0.776110112217047,2.37124792226126,1.70195472151037,0.703804496655795,2.41115305670332,2.22437799380478,1.0447564995665,1.23469281844766,1.99034266818493,0.702213187313235,0.257347907114715,1.42081749697796,2.27838349789052,1.17263029990548,1.62055855314913,1.42046841351126,0.983821158737019,1.3884040159864,1.86027155800326,0.804820204198858,0.817357396570186,0.493679549740441,0.492502392237286,0.243206428637567,0.730999937126662,0.658650345873152,1.20785776884335,0.420579897128254,0.823236899034275,0,0.528901133327089,1.2797295032114,1.16118335930219,1.9330119198314,1.21010114774006,1.11189021922435,0.951128130562796,1.42358718463353,0.823494773620054,1.50801125280162,0.994782360205754,1.16978452271472,0,0.432276099749388,0.597423819763102,2.0863469104839,2.05647322697512,0,1.4255592949172,0.193952487167626,1.68325967736765,0.885311519739602,0.295220295959204,0.627994911365499,0.493588655687202,0.296452627087149,2.33583148002532,2.94838492669805,2.9232074610031,1.62288097110802,2.65294875727659,1.2731292589071,0.863088412352432,0.810676133875177,1.09824565275233,7.18841032636773,1.48856379067401,1.24815069245824,0.757736633841335,0.538192240565737,0.964887042726734,0.184753190166605,1.51593129416388,0.814824882210129,2.03694102930226,0.938760993154008,2.01007508930179,0.952174563544055,0.780534591431195,0.788175720530955,1.55025282754142,0.956728611944923,0.81931657357869,1.03610989119537,1.01254341007058,0,0.54390568381871,0,1.37968373152366,0.481651769963376,0.586058432961016,0.163934945376675,0.252470927204373,0.94652465824877,0.390438744296638,1.07711698866399,0.716906393857656,0.891194696329576,0.849229592366497,2.83367491172426,0.584511715822624,1.18586333383957,0,0.425820255624806,1.24645922567079,2.44330439030364,0.989820737835213,5.30980553359851,1.21390318077491,1.81394134178851,1.69744571780308,1.77181135728464,1.22974059177571,1.80899805217755,1.09060118843252,2.13898427030833,3.16036757935816,3.16255825724996,0,1.02131881726136,0.540183282093931,0.905510786479282,0.643011105094777,1.59606210278046,1.78368817602071,0.987294123612726,0.913394847343798,0.938686832254841,0,0.661585194164886,0.8244312647074,1.77610869365496,2.17126529741361,1.67121281604391,1.14898629821543,0.874442509889552,0.18542530201051,1.53783792718067,1.23832120777933,2.22233432843654,3.01389531207506,1.6403307326523,1.83022538565218,1.5298058699447,1.6794174278839,1.52019971184866,0,2.05618395827738,1.01659733563424,2.05210147561422,1.46361807210128,0.655087691238533,0.809186078308924,0.41326727862668,0.26175594198403,0.518459893167171,0,0,1.79419855252775,2.48187735685646,1.94451188344048,2.0665571756437,1.68956125490778,1.64300134104056,1.8228613878153,2.41176492179135,1.20792060413003,0.288030006257865,6.95224465381992,3.44632865993279,3.90301637226344,6.75588279484534,7.16106782669926,6.95384741734427,8.29348601687785,7.23678683155428,7.87538309595551,10.440332511735,8.87270429204197,8.96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| ||
|short_description=p6@Tnpo1 | |short_description=p6@Tnpo1 | ||
}} | }} |
Latest revision as of 14:40, 25 September 2015
Short description: | p6@Tnpo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tnpo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000109399, NM_001048267, uc007rpe.1_5end |
EntrezGene: | Tnpo1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.20e-07 | 9 |
alpha-beta T cell | 3.20e-07 | 9 |
immature T cell | 3.20e-07 | 9 |
mature T cell | 3.20e-07 | 9 |
immature alpha-beta T cell | 3.20e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.04e-14 | 29 |
immune organ | 1.04e-14 | 29 |
thymus | 6.12e-13 | 23 |
neck | 6.12e-13 | 23 |
respiratory system epithelium | 6.12e-13 | 23 |
hemolymphoid system gland | 6.12e-13 | 23 |
pharyngeal epithelium | 6.12e-13 | 23 |
thymic region | 6.12e-13 | 23 |
pharyngeal gland | 6.12e-13 | 23 |
entire pharyngeal arch endoderm | 6.12e-13 | 23 |
thymus primordium | 6.12e-13 | 23 |
early pharyngeal endoderm | 6.12e-13 | 23 |
pharynx | 6.41e-12 | 24 |
gland of gut | 6.41e-12 | 24 |
upper respiratory tract | 6.41e-12 | 24 |
chordate pharynx | 6.41e-12 | 24 |
pharyngeal arch system | 6.41e-12 | 24 |
pharyngeal region of foregut | 6.41e-12 | 24 |
anterior region of body | 1.09e-10 | 43 |
mixed endoderm/mesoderm-derived structure | 7.28e-10 | 35 |
hematopoietic system | 7.68e-10 | 45 |
blood island | 7.68e-10 | 45 |
craniocervical region | 1.32e-09 | 36 |
segment of respiratory tract | 2.26e-09 | 27 |
hemolymphoid system | 6.62e-09 | 48 |
immune system | 6.62e-09 | 48 |
endocrine system | 2.64e-08 | 72 |
primordium | 4.36e-07 | 134 |