FFCP PHASE1:Mm9::chr11:74739380..74739411,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:74739380..74739411,+
|short_description=p2@Smg6
|description=CAGE_peak_2_at_Smg6_5end
|association_with_transcript=6bp_to_NM_001002764,uc007kcz.1_5end
|E...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=103677 | |EntrezGene=103677 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1988 | |||
|TSSclassifier=NA | |||
|UniProt=P61406 | |UniProt=P61406 | ||
|association_with_transcript=6bp_to_NM_001002764,uc007kcz.1_5end | |||
|cluster_id=chr11:74739380..74739411,+ | |||
|description=CAGE_peak_2_at_Smg6_5end | |||
|id=chr11:74739380..74739411,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.56e-12!29;UBERON:0002370!3.33e-11!23;UBERON:0000974!3.33e-11!23;UBERON:0004807!3.33e-11!23;UBERON:0005058!3.33e-11!23;UBERON:0003351!3.33e-11!23;UBERON:0009113!3.33e-11!23;UBERON:0003295!3.33e-11!23;UBERON:0009722!3.33e-11!23;UBERON:0005562!3.33e-11!23;UBERON:0007690!3.33e-11!23;UBERON:0003408!8.00e-11!24;UBERON:0006562!1.62e-10!24;UBERON:0001557!1.62e-10!24;UBERON:0001042!1.62e-10!24;UBERON:0008814!1.62e-10!24;UBERON:0009145!1.62e-10!24;UBERON:0000065!2.42e-09!41;UBERON:0002390!2.65e-09!45;UBERON:0003061!2.65e-09!45;UBERON:0001004!3.56e-09!42;UBERON:0002193!8.57e-09!48;UBERON:0000072!2.08e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.56e-12,29;UBERON:0005057,2.56e-12,29;UBERON:0002370,3.33e-11,23;UBERON:0000974,3.33e-11,23;UBERON:0004807,3.33e-11,23;UBERON:0005058,3.33e-11,23;UBERON:0003351,3.33e-11,23;UBERON:0009113,3.33e-11,23;UBERON:0003295,3.33e-11,23;UBERON:0009722,3.33e-11,23;UBERON:0005562,3.33e-11,23;UBERON:0007690,3.33e-11,23;UBERON:0003408,8.00e-11,24;UBERON:0006562,1.62e-10,24;UBERON:0001557,1.62e-10,24;UBERON:0001042,1.62e-10,24;UBERON:0008814,1.62e-10,24;UBERON:0009145,1.62e-10,24;UBERON:0000077,5.17e-10,35;UBERON:0000065,2.47e-09,41;UBERON:0002390,2.61e-09,45;UBERON:0003061,2.61e-09,45;UBERON:0001004,3.64e-09,42;UBERON:0002193,8.44e-09,48;UBERON:0002405,8.44e-09,48;UBERON:0000072,2.13e-07,27;UBERON:0007811,3.91e-07,36 | |||
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| ||
|short_description=p2@Smg6 | |||
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Latest revision as of 15:59, 25 September 2015
Short description: | p2@Smg6 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Smg6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1988 |
Association with transcript: | 6bp_to_NM_001002764, uc007kcz.1_5end |
EntrezGene: | Smg6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.56e-12 | 29 |
immune organ | 2.56e-12 | 29 |
thymus | 3.33e-11 | 23 |
neck | 3.33e-11 | 23 |
respiratory system epithelium | 3.33e-11 | 23 |
hemolymphoid system gland | 3.33e-11 | 23 |
pharyngeal epithelium | 3.33e-11 | 23 |
thymic region | 3.33e-11 | 23 |
pharyngeal gland | 3.33e-11 | 23 |
entire pharyngeal arch endoderm | 3.33e-11 | 23 |
thymus primordium | 3.33e-11 | 23 |
early pharyngeal endoderm | 3.33e-11 | 23 |
gland of gut | 8.00e-11 | 24 |
pharynx | 1.62e-10 | 24 |
upper respiratory tract | 1.62e-10 | 24 |
chordate pharynx | 1.62e-10 | 24 |
pharyngeal arch system | 1.62e-10 | 24 |
pharyngeal region of foregut | 1.62e-10 | 24 |
mixed endoderm/mesoderm-derived structure | 5.17e-10 | 35 |
respiratory tract | 2.47e-09 | 41 |
hematopoietic system | 2.61e-09 | 45 |
blood island | 2.61e-09 | 45 |
respiratory system | 3.64e-09 | 42 |
hemolymphoid system | 8.44e-09 | 48 |
immune system | 8.44e-09 | 48 |
segment of respiratory tract | 2.13e-07 | 27 |
craniocervical region | 3.91e-07 | 36 |