FFCP PHASE1:Mm9::chr3:80606711..80606762,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14800 | |EntrezGene=14800 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=G5E8H1,E9QKC0,P23819,Q4LG64,Q80VM6 | |UniProt=G5E8H1,E9QKC0,P23819,Q4LG64,Q80VM6 | ||
|association_with_transcript=0bp_to_ENSMUST00000075316,ENSMUST00000107745,ENSMUST00000107746,NM_001039195,NM_001083806,NM_013540,uc008poa.1,uc008pob.1,uc008poc.1,uc008pod.1,uc008poe.1_5end | |association_with_transcript=0bp_to_ENSMUST00000075316,ENSMUST00000107745,ENSMUST00000107746,NM_001039195,NM_001083806,NM_013540,uc008poa.1,uc008pob.1,uc008poc.1,uc008pod.1,uc008poe.1_5end | ||
|cluster_id=chr3:80606711..80606762,- | |||
|description=CAGE_peak_2_at_Gria2_5end | |description=CAGE_peak_2_at_Gria2_5end | ||
|id=chr3:80606711..80606762,- | |id=chr3:80606711..80606762,- | ||
|ontology_enrichment_celltype=CL:0000540!7.31e-14!33;CL:0000047!7.31e-14!33;CL:0000031!7.31e-14!33;CL:0000404!7.31e-14!33;CL:0000117!2.05e-12!23;CL:0000337!2.05e-12!23;CL:0002319!8.62e-12!43;CL:0000221!9.54e-12!44;CL:0000133!9.54e-12!44;CL:0000393!2.30e-09!39;CL:0000211!2.30e-09!39;CL:0000055!7.17e-08!50 | |ontology_enrichment_celltype=CL:0000540!7.31e-14!33;CL:0000047!7.31e-14!33;CL:0000031!7.31e-14!33;CL:0000404!7.31e-14!33;CL:0000117!2.05e-12!23;CL:0000337!2.05e-12!23;CL:0002319!8.62e-12!43;CL:0000221!9.54e-12!44;CL:0000133!9.54e-12!44;CL:0000393!2.30e-09!39;CL:0000211!2.30e-09!39;CL:0000055!7.17e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.87e-16,33;CL:0000047,2.87e-16,33;CL:0000031,2.87e-16,33;CL:0000404,2.87e-16,33;CL:0000117,4.43e-15,23;CL:0000337,4.43e-15,23;CL:0000393,5.45e-12,39;CL:0000211,5.45e-12,39;CL:0002319,2.57e-11,43;CL:0000221,8.40e-11,44;CL:0000133,8.40e-11,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.97e-30!102;UBERON:0000924!2.97e-30!102;UBERON:0006601!2.97e-30!102;UBERON:0001017!4.57e-30!73;UBERON:0005743!4.57e-30!73;UBERON:0000073!1.16e-29!75;UBERON:0001016!1.16e-29!75;UBERON:0002346!2.59e-29!71;UBERON:0003075!2.59e-29!71;UBERON:0007284!2.59e-29!71;UBERON:0000033!4.55e-25!63;UBERON:0001049!5.95e-25!52;UBERON:0005068!5.95e-25!52;UBERON:0006241!5.95e-25!52;UBERON:0007135!5.95e-25!52;UBERON:0000955!2.98e-24!50;UBERON:0006238!2.98e-24!50;UBERON:0002616!1.76e-23!49;UBERON:0003056!1.06e-21!49;UBERON:0002020!5.21e-20!34;UBERON:0003080!1.41e-19!40;UBERON:0002780!7.54e-19!39;UBERON:0001890!7.54e-19!39;UBERON:0006240!7.54e-19!39;UBERON:0002791!2.20e-17!29;UBERON:0003528!2.20e-17!29;UBERON:0001893!2.20e-17!29;UBERON:0000956!1.06e-12!21;UBERON:0001869!1.06e-12!21;UBERON:0000203!1.06e-12!21;UBERON:0007811!4.97e-12!86;UBERON:0000153!8.00e-12!94;UBERON:0002619!2.19e-10!17;UBERON:0002021!1.22e-08!10;UBERON:0000411!1.22e-08!10;UBERON:0001950!1.22e-08!10 | |ontology_enrichment_uberon=UBERON:0004121!2.97e-30!102;UBERON:0000924!2.97e-30!102;UBERON:0006601!2.97e-30!102;UBERON:0001017!4.57e-30!73;UBERON:0005743!4.57e-30!73;UBERON:0000073!1.16e-29!75;UBERON:0001016!1.16e-29!75;UBERON:0002346!2.59e-29!71;UBERON:0003075!2.59e-29!71;UBERON:0007284!2.59e-29!71;UBERON:0000033!4.55e-25!63;UBERON:0001049!5.95e-25!52;UBERON:0005068!5.95e-25!52;UBERON:0006241!5.95e-25!52;UBERON:0007135!5.95e-25!52;UBERON:0000955!2.98e-24!50;UBERON:0006238!2.98e-24!50;UBERON:0002616!1.76e-23!49;UBERON:0003056!1.06e-21!49;UBERON:0002020!5.21e-20!34;UBERON:0003080!1.41e-19!40;UBERON:0002780!7.54e-19!39;UBERON:0001890!7.54e-19!39;UBERON:0006240!7.54e-19!39;UBERON:0002791!2.20e-17!29;UBERON:0003528!2.20e-17!29;UBERON:0001893!2.20e-17!29;UBERON:0000956!1.06e-12!21;UBERON:0001869!1.06e-12!21;UBERON:0000203!1.06e-12!21;UBERON:0007811!4.97e-12!86;UBERON:0000153!8.00e-12!94;UBERON:0002619!2.19e-10!17;UBERON:0002021!1.22e-08!10;UBERON:0000411!1.22e-08!10;UBERON:0001950!1.22e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.44e-33,73;UBERON:0001016,5.53e-32,75;UBERON:0002346,4.14e-31,64;UBERON:0003075,4.14e-31,64;UBERON:0007284,4.14e-31,64;UBERON:0000073,1.31e-30,54;UBERON:0001049,6.72e-29,52;UBERON:0005068,6.72e-29,52;UBERON:0006241,6.72e-29,52;UBERON:0007135,6.72e-29,52;UBERON:0004121,8.48e-27,95;UBERON:0000924,8.48e-27,95;UBERON:0006601,8.48e-27,95;UBERON:0000955,1.56e-25,47;UBERON:0006238,1.56e-25,47;UBERON:0002616,1.31e-24,46;UBERON:0010371,1.99e-24,73;UBERON:0003056,5.30e-23,49;UBERON:0002020,5.79e-23,34;UBERON:0003080,5.95e-22,40;UBERON:0002780,4.58e-21,39;UBERON:0001890,4.58e-21,39;UBERON:0006240,4.58e-21,39;UBERON:0003528,1.06e-19,29;UBERON:0002791,1.06e-19,29;UBERON:0001893,1.06e-19,29;UBERON:0010314,1.66e-18,92;UBERON:0000956,6.56e-14,21;UBERON:0001869,6.56e-14,21;UBERON:0000203,6.56e-14,21;UBERON:0002619,4.67e-11,17;UBERON:0002021,2.23e-10,10;UBERON:0000411,2.23e-10,10;UBERON:0001950,2.23e-10,10;UBERON:0003076,2.32e-07,12;UBERON:0003057,2.32e-07,12;UBERON:0002420,5.43e-07,8;UBERON:0007245,5.43e-07,8;UBERON:0010009,5.43e-07,8;UBERON:0010011,5.43e-07,8;UBERON:0000454,5.43e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95006494767516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0.219686182734472,0.777719596297134,0.279972843250725,0,0,0,0,0,0,0,6.27181028664753,6.87688273053643,5.70448263155561,0,0,0,0,0,0.599200221036809,1.92109152660777,15.4497522339632,9.45041568321835,10.9368979902719,6.28432165688368,10.6016899656774,9.67677313798137,7.85932862349538,7.35375029288017,33.0347642998166,44.8182556679009,41.4737639791857,9.10015385338338,10.1551284398675,11.9810075228055,20.6595419261022,34.3285192119325,40.1859391653011,24.1595440088408,28.3319644790215,12.4887628702951,0.302904773332736,0.226714680320357,0,0,0,0,0,0,1.54488862144927,0,0,0,0.563373679106722,0,0,0,0,0,0,1.48439043634778,0,4.60170631100957,1.38788261412909,3.34912026143355,0.922461989024234,2.56228488939458,4.58595957829249,0.879666139307728,0,0,0,0,0,0,0,64.9973369365635,58.0167377873271,0,0,0,0,77.5915512116982,75.0300988622547,33.8010207183605,93.8651329038293,100.49617473082,53.1937394072474,70.5749494344746,0.101839363850316,0.995255764880744,6.57079171927554,3.57751155007006,0.910843100738926,0.689706313300419,1.62055916824814,5.27466862425003,6.5995404176788,8.32739181851524,5.528401749024,9.31332134660456,0,0.945530400839096,1.40760899331159,1.31517439456545,1.39023624612799,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,84.9571392199074,38.3834204174731,0.330418782983798,0,1.49301775374664,1.16118335930219,1.03093969057675,0.201683524623343,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0.596869416123452,0.974820435595601,0,0,0.398282546508734,0,1.02823661348756,0,0.203651327845314,0.193952487167626,0.210407459670956,0.189709611372772,0,0,0,0,0,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0,46.2385699164841,57.9025731765484,0,0,1.89304931649754,3.51394869866975,5.60100834105277,2.38968797952552,2.67358408898873,1.13230612315533,1.61924280669958,6.13737301613755,8.69633111482352,79.6876864726081,0,1.06839362200353,1.14020871547503,0.164970122972535,0,0,0,1.13163047853539,0.590603785761546,0.614870295887855,0.258428293168221,1.45413491791002,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,11.9153862013826,1.26042765821917,0,0.857348140126369,3.3694644392032,3.74574516964348,5.43011767986999,2.13125464380219,0,0,0,0,0.322928853391811,0.301564624640779,0.119372344003136,0.492422699235184,0.582961673259701,34.4891061739548,0,0.619160603889667,0.370389054739423,0.376736914009382,0,0,0.169978429993855,0,0.414599921413271,0,0.632671987162271,0.406638934253697,0.324016022465404,1.04544148007234,0,0.674321731924103,0.661227645802687,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0.469428954583016,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0,0,101.655331671072,78.7156154427272,81.9240584218337,60.8360265496654,82.8949848922477,84.6041165076465,83.7027900287439,70.7004289062026,91.0816242058251,80.7706086332839,1.03787347584177,3.19219898720825,6.4878770186571,5.59145449257076,4.19226325255965,3.30918315210025,10.6678429344775,8.03536723231687,8.66481865897901,6.06473308233114,6.84394109703647,6.60192194851267,8.05316964240989,7.81106859339405,9.70659425349864,6.66811167796303,10.0819363572024,8.29509647993932,4.53294490883637,7.80154276712306,6.85738504770831,8.69631450180754,6.19934093863034,8.28474574804273,7.52875043322645,7.1922416707925,10.6098224266208,8.94437018888666,7.19761803383067,8.97827634652382,7.3553711236988,7.97886307242064,7.7753898202241,6.35241048862461,6.36591816237767,5.74564329257276,4.91256377735358,5.15690529715916,1.72159498861959,0.882365676478062,0.927471342481686 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95006494767516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0.219686182734472,0.777719596297134,0.279972843250725,0,0,0,0,0,0,0,6.27181028664753,6.87688273053643,5.70448263155561,0,0,0,0,0,0.599200221036809,1.92109152660777,15.4497522339632,9.45041568321835,10.9368979902719,6.28432165688368,10.6016899656774,9.67677313798137,7.85932862349538,7.35375029288017,33.0347642998166,44.8182556679009,41.4737639791857,9.10015385338338,10.1551284398675,11.9810075228055,20.6595419261022,34.3285192119325,40.1859391653011,24.1595440088408,28.3319644790215,12.4887628702951,0.302904773332736,0.226714680320357,0,0,0,0,0,0,1.54488862144927,0,0,0,0.563373679106722,0,0,0,0,0,0,1.48439043634778,0,4.60170631100957,1.38788261412909,3.34912026143355,0.922461989024234,2.56228488939458,4.58595957829249,0.879666139307728,0,0,0,0,0,0,0,64.9973369365635,58.0167377873271,0,0,0,0,77.5915512116982,75.0300988622547,33.8010207183605,93.8651329038293,100.49617473082,53.1937394072474,70.5749494344746,0.101839363850316,0.995255764880744,6.57079171927554,3.57751155007006,0.910843100738926,0.689706313300419,1.62055916824814,5.27466862425003,6.5995404176788,8.32739181851524,5.528401749024,9.31332134660456,0,0.945530400839096,1.40760899331159,1.31517439456545,1.39023624612799,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,84.9571392199074,38.3834204174731,0.330418782983798,0,1.49301775374664,1.16118335930219,1.03093969057675,0.201683524623343,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0.596869416123452,0.974820435595601,0,0,0.398282546508734,0,1.02823661348756,0,0.203651327845314,0.193952487167626,0.210407459670956,0.189709611372772,0,0,0,0,0,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0,46.2385699164841,57.9025731765484,0,0,1.89304931649754,3.51394869866975,5.60100834105277,2.38968797952552,2.67358408898873,1.13230612315533,1.61924280669958,6.13737301613755,8.69633111482352,79.6876864726081,0,1.06839362200353,1.14020871547503,0.164970122972535,0,0,0,1.13163047853539,0.590603785761546,0.614870295887855,0.258428293168221,1.45413491791002,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,11.9153862013826,1.26042765821917,0,0.857348140126369,3.3694644392032,3.74574516964348,5.43011767986999,2.13125464380219,0,0,0,0,0.322928853391811,0.301564624640779,0.119372344003136,0.492422699235184,0.582961673259701,34.4891061739548,0,0.619160603889667,0.370389054739423,0.376736914009382,0,0,0.169978429993855,0,0.414599921413271,0,0.632671987162271,0.406638934253697,0.324016022465404,1.04544148007234,0,0.674321731924103,0.661227645802687,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0.469428954583016,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0,0,101.655331671072,78.7156154427272,81.9240584218337,60.8360265496654,82.8949848922477,84.6041165076465,83.7027900287439,70.7004289062026,91.0816242058251,80.7706086332839,1.03787347584177,3.19219898720825,6.4878770186571,5.59145449257076,4.19226325255965,3.30918315210025,10.6678429344775,8.03536723231687,8.66481865897901,6.06473308233114,6.84394109703647,6.60192194851267,8.05316964240989,7.81106859339405,9.70659425349864,6.66811167796303,10.0819363572024,8.29509647993932,4.53294490883637,7.80154276712306,6.85738504770831,8.69631450180754,6.19934093863034,8.28474574804273,7.52875043322645,7.1922416707925,10.6098224266208,8.94437018888666,7.19761803383067,8.97827634652382,7.3553711236988,7.97886307242064,7.7753898202241,6.35241048862461,6.36591816237767,5.74564329257276,4.91256377735358,5.15690529715916,1.72159498861959,0.882365676478062,0.927471342481686 | ||
|short_description=p2@Gria2 | |short_description=p2@Gria2 | ||
}} | }} |
Latest revision as of 17:45, 25 September 2015
Short description: | p2@Gria2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gria2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000075316, ENSMUST00000107745, ENSMUST00000107746, NM_001039195, NM_001083806, NM_013540, uc008poa.1, uc008pob.1, uc008poc.1, uc008pod.1, uc008poe.1_5end |
EntrezGene: | Gria2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.87e-16 | 33 |
neuronal stem cell | 2.87e-16 | 33 |
neuroblast | 2.87e-16 | 33 |
electrically signaling cell | 2.87e-16 | 33 |
CNS neuron (sensu Vertebrata) | 4.43e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.43e-15 | 23 |
electrically responsive cell | 5.45e-12 | 39 |
electrically active cell | 5.45e-12 | 39 |
neural cell | 2.57e-11 | 43 |
ectodermal cell | 8.40e-11 | 44 |
neurectodermal cell | 8.40e-11 | 44 |