Personal tools

FFCP PHASE1:Mm9::chr5:149862954..149862966,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15289
|EntrezGene=15289
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=59bp_to_uc009apc.1_5end
|association_with_transcript=59bp_to_uc009apc.1_5end
|cluster_id=chr5:149862954..149862966,-
|description=CAGE_peak_9_at_Hmgb1_5end
|description=CAGE_peak_9_at_Hmgb1_5end
|id=chr5:149862954..149862966,-
|id=chr5:149862954..149862966,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000222,1.75e-14,7;CL:0000680,5.81e-12,6;CL:0000187,5.81e-12,6;CL:0000056,5.81e-12,6;CL:0000182,7.88e-10,5;CL:0000192,1.58e-09,3;CL:0000359,1.58e-09,3;CL:0002539,1.58e-09,3;CL:0000514,1.58e-09,3;CL:0000355,7.23e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003104!8.93e-11!131;UBERON:0009142!8.93e-11!131;UBERON:0002530!2.40e-10!65;UBERON:0005057!2.73e-10!51;UBERON:0002368!4.69e-10!60;UBERON:0000926!3.71e-09!193;UBERON:0004120!3.71e-09!193;UBERON:0006603!3.71e-09!193;UBERON:0005911!1.16e-08!69;UBERON:0000490!2.29e-08!66;UBERON:0000077!2.67e-08!97;UBERON:0005256!6.39e-08!47;UBERON:0001041!7.39e-08!92;UBERON:0009569!1.66e-07!66;UBERON:0000949!4.29e-07!72;UBERON:0001048!6.36e-07!147;UBERON:0000065!7.47e-07!41
|ontology_enrichment_uberon_v019_2=UBERON:0000490,6.09e-17,66;UBERON:0002107,8.06e-12,22;UBERON:0007499,8.06e-12,22;UBERON:0006925,8.06e-12,22;UBERON:0009497,8.06e-12,22;UBERON:0000015,8.06e-12,22;UBERON:0002423,8.06e-12,22;UBERON:0006235,8.06e-12,22;UBERON:0008835,8.06e-12,22;UBERON:0003894,8.06e-12,22;UBERON:0004161,8.06e-12,22;UBERON:0008836,8.06e-12,22;UBERON:0003929,8.07e-12,55;UBERON:0005256,1.22e-11,45;UBERON:0009854,3.20e-11,23;UBERON:0009856,3.20e-11,23;UBERON:0005911,3.25e-11,69;UBERON:0003914,5.27e-11,47;UBERON:0002368,1.59e-10,60;UBERON:0002365,3.61e-10,25;UBERON:0002330,3.61e-10,25;UBERON:0000055,1.08e-09,5;UBERON:0007500,1.08e-09,5;UBERON:0001981,1.08e-09,5;UBERON:0002049,1.08e-09,5;UBERON:0007798,1.08e-09,5;UBERON:0004537,1.08e-09,5;UBERON:0006965,1.08e-09,5;UBERON:0001135,1.58e-09,3;UBERON:0004237,1.58e-09,3;UBERON:0004695,1.58e-09,3;UBERON:0002111,1.58e-09,3;UBERON:0004178,1.58e-09,3;UBERON:0002530,1.97e-09,65;UBERON:0001041,4.18e-09,80;UBERON:0003104,5.03e-09,61;UBERON:0009142,5.03e-09,61;UBERON:0000949,3.69e-08,72;UBERON:0001134,7.23e-08,9;UBERON:0002036,7.23e-08,9;UBERON:0002385,7.23e-08,9;UBERON:0000486,7.23e-08,9;UBERON:0007503,7.23e-08,9;UBERON:0001015,7.23e-08,9;UBERON:0002329,7.23e-08,9;UBERON:0003082,7.23e-08,9;UBERON:0003059,7.23e-08,9;UBERON:0007282,7.23e-08,9;UBERON:0004290,7.23e-08,9;UBERON:0009618,7.23e-08,9;UBERON:0000947,3.08e-07,4;UBERON:0001637,3.08e-07,4;UBERON:0004573,3.08e-07,4;UBERON:0003509,3.08e-07,4;UBERON:0004571,3.08e-07,4;UBERON:0010191,3.08e-07,4;UBERON:0004572,3.08e-07,4;UBERON:0000383,4.78e-07,10
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.985521055061667,0.936258105287974,0.171217968225505,0.0797721589953364,0.342401459862411,0.34968160967599,0.333109761815663,0,0,0.315462165358238,0,0.42438965179803,0.425216450755349,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,1.25896817975577,1.92616169317078,2.9367480345869,0,0,0.219686182734472,0,0.279972843250725,0,0.671130424230945,0,1.00828139742739,1.80081605225163,1.14613375975503,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.302286240427142,1.73918693221007,0.860423876981386,2.03991400112325,0.539703191637817,1.29955283489534,4.03224198387602,0.561777680527007,0,0.259786004602869,0.70667914902068,0,2.56652954828636,0,0,0.432982082022428,0,0,1.02765491747154,0.517875767294343,0.890652834388949,0,0.304465478312141,0,0.301445281105245,0.940709657085638,0.628332956648377,0.247194967734374,0.289198713839823,0,0.485300549842228,0,1.93950101254089,0,0,0,0.255457055208591,0.11981512450592,0,0.254140454146129,0,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.373220911830279,0,1.05220927943237,0,0,0,0,0.340182495756639,0.12811372028485,0.187403449119458,0,0,0,0,0.43839146485515,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0,0,0,0.467061369468678,0,0.32833492815819,0.243206428637567,0.584799949701329,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0.420814919341911,0.126473074248515,0.590440591918409,0.627994911365499,0.863780147452604,2.96452627087149,0,0,0,0,0,0.25462585178142,0.863088412352432,0.810676133875177,1.09824565275233,2.87536413054709,1.48856379067401,1.87222603868736,0.757736633841335,0.358794827043824,2.41221760681684,1.29327233116623,0,0.162964976442026,0.169745085775188,0,0.502518772325447,0.476087281772027,0.390267295715598,0.945810864637146,0.8858587585951,0.318909537314974,1.3109065177259,0.345369963731791,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0,0.491804836130026,0.504941854408746,0,0,0.646270193198397,0.238968797952552,0,0.283076530788832,1.21443210502468,0,0,0,0.425820255624806,0,0.651547837414304,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0.469343416127421,1.48282449604674,0.220528398054962,0.65954501176592,0.807322133479528,0.0603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,0.18542530201051,0.341741761595705,0.206386867963223,0,0.188368457004691,0.136694227721025,0.457556346413045,0.679913719975421,1.11961161858926,1.38199973804424,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0,0.299033092087958,0.330916980914195,0,0,0,0.469428954583016,0.13020438484395,0.524296722128554,0.241584120826006,0,0.948033361884535,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.600977247599844,1.32920574457119,1.51449674922221,0.990688486514998,1.00826185136841,1.07203668813728,2.30908419936791,2.45441494581295,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.419226325255965,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0.789209134313529,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0,0.578719832943424,0,0.233931608445408,0.644613162144895,0.765153328275374,0,0.231867835620421
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.985521055061667,0.936258105287974,0.171217968225505,0.0797721589953364,0.342401459862411,0.34968160967599,0.333109761815663,0,0,0.315462165358238,0,0.42438965179803,0.425216450755349,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,1.25896817975577,1.92616169317078,2.9367480345869,0,0,0.219686182734472,0,0.279972843250725,0,0.671130424230945,0,1.00828139742739,1.80081605225163,1.14613375975503,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.302286240427142,1.73918693221007,0.860423876981386,2.03991400112325,0.539703191637817,1.29955283489534,4.03224198387602,0.561777680527007,0,0.259786004602869,0.70667914902068,0,2.56652954828636,0,0,0.432982082022428,0,0,1.02765491747154,0.517875767294343,0.890652834388949,0,0.304465478312141,0,0.301445281105245,0.940709657085638,0.628332956648377,0.247194967734374,0.289198713839823,0,0.485300549842228,0,1.93950101254089,0,0,0,0.255457055208591,0.11981512450592,0,0.254140454146129,0,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.373220911830279,0,1.05220927943237,0,0,0,0,0.340182495756639,0.12811372028485,0.187403449119458,0,0,0,0,0.43839146485515,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0,0,0,0.467061369468678,0,0.32833492815819,0.243206428637567,0.584799949701329,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0.420814919341911,0.126473074248515,0.590440591918409,0.627994911365499,0.863780147452604,2.96452627087149,0,0,0,0,0,0.25462585178142,0.863088412352432,0.810676133875177,1.09824565275233,2.87536413054709,1.48856379067401,1.87222603868736,0.757736633841335,0.358794827043824,2.41221760681684,1.29327233116623,0,0.162964976442026,0.169745085775188,0,0.502518772325447,0.476087281772027,0.390267295715598,0.945810864637146,0.8858587585951,0.318909537314974,1.3109065177259,0.345369963731791,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0,0.491804836130026,0.504941854408746,0,0,0.646270193198397,0.238968797952552,0,0.283076530788832,1.21443210502468,0,0,0,0.425820255624806,0,0.651547837414304,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0.469343416127421,1.48282449604674,0.220528398054962,0.65954501176592,0.807322133479528,0.0603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,0.18542530201051,0.341741761595705,0.206386867963223,0,0.188368457004691,0.136694227721025,0.457556346413045,0.679913719975421,1.11961161858926,1.38199973804424,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0,0.299033092087958,0.330916980914195,0,0,0,0.469428954583016,0.13020438484395,0.524296722128554,0.241584120826006,0,0.948033361884535,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.600977247599844,1.32920574457119,1.51449674922221,0.990688486514998,1.00826185136841,1.07203668813728,2.30908419936791,2.45441494581295,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.419226325255965,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0.789209134313529,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0,0.578719832943424,0,0.233931608445408,0.644613162144895,0.765153328275374,0,0.231867835620421
|short_description=p9@Hmgb1
|short_description=p9@Hmgb1
}}
}}

Latest revision as of 18:37, 25 September 2015

Short description:p9@Hmgb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Hmgb1_5end
Coexpression cluster:NA
Association with transcript: 59bp_to_uc009apc.1_5end
EntrezGene:Hmgb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Hmgb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
unilaminar epithelium6.09e-1766
liver8.06e-1222
epithelial sac8.06e-1222
digestive gland8.06e-1222
epithelium of foregut-midgut junction8.06e-1222
anatomical boundary8.06e-1222
hepatobiliary system8.06e-1222
foregut-midgut junction8.06e-1222
hepatic diverticulum8.06e-1222
liver primordium8.06e-1222
septum transversum8.06e-1222
liver bud8.06e-1222
gut epithelium8.07e-1255
trunk mesenchyme1.22e-1145
digestive tract diverticulum3.20e-1123
sac3.20e-1123
endo-epithelium3.25e-1169
epithelial tube5.27e-1147
endocrine gland1.59e-1060
exocrine gland3.61e-1025
exocrine system3.61e-1025
vessel1.08e-095
epithelial tube open at both ends1.08e-095
blood vessel1.08e-095
vasculature1.08e-095
vascular system1.08e-095
blood vasculature1.08e-095
vascular cord1.08e-095
smooth muscle tissue1.58e-093
blood vessel smooth muscle1.58e-093
arterial system smooth muscle1.58e-093
artery smooth muscle tissue1.58e-093
aorta smooth muscle tissue1.58e-093
gland1.97e-0965
foregut4.18e-0980
mesenchyme5.03e-0961
entire embryonic mesenchyme5.03e-0961
endocrine system3.69e-0872
skeletal muscle tissue7.23e-089
striated muscle tissue7.23e-089
muscle tissue7.23e-089
multilaminar epithelium7.23e-089
epithelial vesicle7.23e-089
musculature7.23e-089
somite7.23e-089
myotome7.23e-089
presomitic mesoderm7.23e-089
presumptive segmental plate7.23e-089
dermomyotome7.23e-089
trunk paraxial mesoderm7.23e-089
aorta3.08e-074
artery3.08e-074
systemic artery3.08e-074
arterial blood vessel3.08e-074
systemic arterial system3.08e-074
aortic system3.08e-074
arterial system3.08e-074
musculature of body4.78e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:149862954..149862966,-&oldid=4207421"