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FFCP PHASE1:Mm9::chr2:140221182..140221201,+: Difference between revisions

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(Created page with "{{FFCP |id=chr2:140221182..140221201,+ |short_description=p1@Macrod2 |description=CAGE_peak_1_at_Macrod2_5end |association_with_transcript=0bp_to_ENSMUST00000124403,ENSMUS...")
 
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{{FFCP
{{FFCP
|id=chr2:140221182..140221201,+
|DHSsupport=NA
|short_description=p1@Macrod2
|DPIdataset=NA
|description=CAGE_peak_1_at_Macrod2_5end
|association_with_transcript=0bp_to_ENSMUST00000124403,ENSMUST00000154505,uc012cfa.1_5end
|EntrezGene=72899
|EntrezGene=72899
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000124403,ENSMUST00000154505,uc012cfa.1_5end
|cluster_id=chr2:140221182..140221201,+
|description=CAGE_peak_1_at_Macrod2_5end
|id=chr2:140221182..140221201,+
|ontology_enrichment_celltype=CL:0000117!7.77e-10!23;CL:0000337!7.77e-10!23;CL:0000540!1.10e-08!33;CL:0000047!1.10e-08!33;CL:0000031!1.10e-08!33;CL:0000404!1.10e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,7.74e-10,23;CL:0000337,7.74e-10,23;CL:0000540,1.10e-08,33;CL:0000047,1.10e-08,33;CL:0000031,1.10e-08,33;CL:0000404,1.10e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.12e-21!63;UBERON:0003056!2.62e-18!49;UBERON:0001049!4.67e-18!52;UBERON:0005068!4.67e-18!52;UBERON:0006241!4.67e-18!52;UBERON:0007135!4.67e-18!52;UBERON:0001017!6.01e-18!73;UBERON:0005743!6.01e-18!73;UBERON:0000955!6.11e-18!50;UBERON:0006238!6.11e-18!50;UBERON:0002616!2.73e-17!49;UBERON:0002346!3.01e-17!71;UBERON:0003075!3.01e-17!71;UBERON:0007284!3.01e-17!71;UBERON:0000073!8.64e-17!75;UBERON:0001016!8.64e-17!75;UBERON:0003080!8.78e-15!40;UBERON:0002020!1.60e-14!34;UBERON:0004121!1.78e-14!102;UBERON:0000924!1.78e-14!102;UBERON:0006601!1.78e-14!102;UBERON:0002780!3.30e-14!39;UBERON:0001890!3.30e-14!39;UBERON:0006240!3.30e-14!39;UBERON:0002791!9.18e-13!29;UBERON:0003528!9.18e-13!29;UBERON:0001893!9.18e-13!29;UBERON:0007811!2.05e-12!86;UBERON:0000153!1.39e-11!94;UBERON:0000468!1.25e-09!333;UBERON:0000956!5.09e-09!21;UBERON:0001869!5.09e-09!21;UBERON:0000203!5.09e-09!21;UBERON:0002021!6.72e-08!10;UBERON:0000411!6.72e-08!10;UBERON:0001950!6.72e-08!10;UBERON:0000479!1.34e-07!349;UBERON:0002619!3.82e-07!17;UBERON:0000922!4.66e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.90e-21,64;UBERON:0003075,2.90e-21,64;UBERON:0007284,2.90e-21,64;UBERON:0010371,2.38e-19,73;UBERON:0000073,3.18e-19,54;UBERON:0003056,2.60e-18,49;UBERON:0001049,4.63e-18,52;UBERON:0005068,4.63e-18,52;UBERON:0006241,4.63e-18,52;UBERON:0007135,4.63e-18,52;UBERON:0001017,5.96e-18,73;UBERON:0004121,3.73e-17,95;UBERON:0000924,3.73e-17,95;UBERON:0006601,3.73e-17,95;UBERON:0001016,8.58e-17,75;UBERON:0000955,2.70e-16,47;UBERON:0006238,2.70e-16,47;UBERON:0002616,1.17e-15,46;UBERON:0010314,6.63e-15,92;UBERON:0003080,8.73e-15,40;UBERON:0002020,1.59e-14,34;UBERON:0002780,3.28e-14,39;UBERON:0001890,3.28e-14,39;UBERON:0006240,3.28e-14,39;UBERON:0003528,9.13e-13,29;UBERON:0002791,9.13e-13,29;UBERON:0001893,9.13e-13,29;UBERON:0000956,5.07e-09,21;UBERON:0001869,5.07e-09,21;UBERON:0000203,5.07e-09,21;UBERON:0002021,6.70e-08,10;UBERON:0000411,6.70e-08,10;UBERON:0001950,6.70e-08,10;UBERON:0000479,1.15e-07,349;UBERON:0002619,3.81e-07,17
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321817017,9.94672579539312,9.59150802359267,0.621339313086926,131.904147652101,5.38259565758324,7.44563207056939,8.16694991045,8.39538852605252,8.27885014904813,5.39843297770468,9.11430693907651,18.0358072412223,85.0376105307541,91.0174819774855,8.21628913633263,9.52808511863772,9.55211901632893,6.75588279484534,10.025494957379,8.94066096515692,5.52899067791857,11.519783119617,8.38021534569625,8.76378276532498,7.76361625553672,6.43222012882366,6.73482891482306,5.14258369598903,10.8830584135301,1.77588762699252,0.897138566094757,0.839423081820392,6.95482538515886,6.38120416534019,5.12824547948342,4.93047271881851,6.01886524842436,60.4284471600261,65.3661835840191,68.7474616127276,51.2122483384189,59.6021792200459,68.7408446624627,61.4270475210943,50.8862959643369,52.5645194421677,52.2937914869338,15.5681021376265,14.3648954424371,17.9270286041841,13.8570828728928,17.8171188233785,18.7520378619014,17.5574914963276,18.7491902087394,25.0316983481616,22.2373546352142,24.334012789463,23.7669190146456,22.9421693301212,21.3844009032263,21.4234299204437,18.5754539600399,21.9021376035777,21.4129234714713,17.3076078337389,20.3134509785468,25.7151939289062,24.1367096376699,22.8898742349428,22.9647338279079,24.2802201471553,23.9459340333445,21.9513567447327,25.5177620094708,20.2348129630334,15.7119836064167,22.8965584979656,21.9664995697507,20.0523211153148,21.2263472424773,14.4679958235856,15.2384452542147,15.6734177658424,13.1071342969462,13.1988949127502,12.3531194706929,16.2307484934295
|phase1_expression=23.7020293715095,3.48975407639361,2.72999543633722,4.53696316960245,5.00895729946347,7.21880869221126,7.2419918584613,1.67860320474049,0.84473233291,1.63845168425395,1.02730780935303,1.03703806693937,3.0816131387617,2.09808965805594,4.33042690360362,3.03712901084739,3.49780939064073,0.157731082679119,0.548457734422955,0.42438965179803,39.4600866300964,8.14185799847259,9.92559198727954,3.35984087866154,4.5881856213434,2.8711598205751,4.73838195774982,2.37018355954478,7.79096019771133,6.04872311423834,6.65191531965914,5.08024538767705,8.61090702618398,0,9.82095507154334,11.6364251750945,12.6585000882669,0,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,1.6366586336825,1.92616169317078,3.48738829107195,4.69434806608824,7.84890562969608,2.63623419281366,5.8328969722285,3.77963338388479,4.31257693094915,0,2.90144856804538,0.672187598284928,0.514518872071894,2.29226751951005,2.06268836910977,25.4918740683093,19.0436752537932,25.9870875437533,1.69422266034566,3.55717918444456,2.2497492932035,0.988866362566974,2.8419204597844,7.19040265244171,3.07374644257244,28.3072641602144,26.3261579746797,29.0248446664907,16.2821061110168,17.0068776532742,25.4780862367104,17.0604938412461,13.7882817991503,37.4393995397922,36.6462660304489,31.1821262510174,29.4106421638332,21.1336456721566,26.045668527838,22.3346399201105,31.5147061617741,34.6852022453359,32.9984015730508,33.5997166685883,27.9599168737951,4.54357159999104,6.04572480854284,11.0148505706638,8.60423876981386,4.0798280022465,7.55584468292944,9.09686984426737,13.8888335000174,13.3422199125164,0,0,0,19.7180787687353,12.8326477414318,25.4805239706646,21.3320010945999,2.81438353314578,2.53359865475099,2.02209778005913,12.6744106488157,6.99132285847364,5.49235914539852,6.93941307064543,6.39377504455497,6.22661842591358,7.988299949289,5.76184664964954,5.6549966098354,1.73036477414062,8.09756398751505,4.42305275974937,14.3972496453194,9.49618529379692,13.5765070877862,1.86391761218122,47.1377083188591,50.2672096352292,7.15279754584056,3.35482348616577,1.79970819298022,1.27070227073065,42.3907509515648,59.9325789692401,44.1046775916154,48.4969853336451,51.1430914660661,41.557608911912,58.4068547043927,7.84163101647435,7.71323217782577,16.4269792981889,20.2024181651015,17.3060189140396,17.4725599369439,18.9065236295617,29.5381442958002,31.8410816028214,37.537320043461,22.8632207925738,40.3577258352864,7.76044774558232,11.1572587299013,10.9089696981648,6.79506770525482,12.2340789659263,10.0993128291428,13.5816210029243,7.96137067273973,1.40442637462647,3.86021860672073,2.55747149456033,10.3562886267751,9.85009451920604,12.42428224081,9.70653415899362,16.3314312350345,14.5011086114136,13.2544348507732,10.4626626545851,8.52386999280337,11.0255099442032,10.8350526292203,11.1874957173281,11.5497990066013,9.44065495751518,10.468100663309,43.7403093013385,31.2830021633025,0.991256348951394,1.85115396664481,10.4511242762265,10.9151235774406,12.6290112095651,9.4791256572971,15.5664630691409,13.3157938278791,3.79623249235609,11.0348299665087,12.0640900224129,9.35095418593409,14.0374142725766,5.39291645192533,9.07779809473716,8.16479220342906,8.15571974098251,10.5108631600951,7.88954149711563,11.8117770150282,13.1887691273986,8.34616256694791,13.1531997218455,14.6134046499806,16.0138702398202,12.2163192282583,8.30067355844017,6.50695912292767,5.50365186316968,5.39669069723649,3.65148218499305,5.54707467430559,7.63877555344259,4.60313819921297,3.56697498905078,4.94210543738547,10.0637744569148,4.83783231969054,10.9213185590096,8.5876818502018,7.53469136792031,7.71909634181387,5.91210208533135,10.9905018826881,11.8964432802679,13.9190970335654,13.3773441524446,9.5478566741835,9.04565835366852,10.7323506321789,13.24135210492,10.1873757238436,10.5240147313941,8.02930242107116,8.11619414769709,8.10034728056465,4.52373851817817,1.08781136763742,7.86822836830458,6.34654516500885,28.8991061978026,36.4528345301752,1.96721934452011,29.0341566285029,10.7272794601527,10.1514073517126,11.6328634775711,7.64700153448166,8.46634961513098,15.5692091933858,9.31064613852257,13.151513606009,17.392662229647,55.5885877409726,8.51640511249612,10.5058706163681,12.5422958702254,16.4970122972535,14.6019652173959,11.4106898992841,8.76738315197778,15.2770114602277,9.44966057218473,14.4494519533646,12.1461297789064,18.1766864738753,16.3988794056972,12.9575070753685,5.27093042874994,12.3762651897824,20.4263763452273,15.4852540866927,10.2193360188376,16.9326257674958,20.0394464015769,17.1234064897988,17.1130981426206,7.91608867697958,1.17335854031855,0.63549621259146,4.19003956304428,14.6748765117917,8.88054346827481,8.44380948994182,6.80422360817878,7.71462228801788,7.28702091574627,29.2971977176605,3.2465467351592,10.1129565301979,8.51894825900674,3.20226376907975,3.69074414846768,3.88922894451088,2.88963330989554,2.79902904647316,1.93479963326193,5.72802370809068,10.2809197913869,17.2821547057821,25.4892604339451,18.8179466413022,20.9628061196331,14.8350781023303,12.7286321817017,9.94672579539312,9.59150802359267,0.621339313086926,131.904147652101,5.38259565758324,7.44563207056939,8.16694991045,8.39538852605252,8.27885014904813,5.39843297770468,9.11430693907651,18.0358072412223,85.0376105307541,91.0174819774855,8.21628913633263,9.52808511863772,9.55211901632893,6.75588279484534,10.025494957379,8.94066096515692,5.52899067791857,11.519783119617,8.38021534569625,8.76378276532498,7.76361625553672,6.43222012882366,6.73482891482306,5.14258369598903,10.8830584135301,1.77588762699252,0.897138566094757,0.839423081820392,6.95482538515886,6.38120416534019,5.12824547948342,4.93047271881851,6.01886524842436,60.4284471600261,65.3661835840191,68.7474616127276,51.2122483384189,59.6021792200459,68.7408446624627,61.4270475210943,50.8862959643369,52.5645194421677,52.2937914869338,15.5681021376265,14.3648954424371,17.9270286041841,13.8570828728928,17.8171188233785,18.7520378619014,17.5574914963276,18.7491902087394,25.0316983481616,22.2373546352142,24.334012789463,23.7669190146456,22.9421693301212,21.3844009032263,21.4234299204437,18.5754539600399,21.9021376035777,21.4129234714713,17.3076078337389,20.3134509785468,25.7151939289062,24.1367096376699,22.8898742349428,22.9647338279079,24.2802201471553,23.9459340333445,21.9513567447327,25.5177620094708,20.2348129630334,15.7119836064167,22.8965584979656,21.9664995697507,20.0523211153148,21.2263472424773,14.4679958235856,15.2384452542147,15.6734177658424,13.1071342969462,13.1988949127502,12.3531194706929,16.2307484934295
|short_description=p1@Macrod2
}}
}}

Latest revision as of 19:55, 25 September 2015

Short description:p1@Macrod2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Macrod2_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000124403, ENSMUST00000154505, uc012cfa.1_5end
EntrezGene:Macrod2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Macrod2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.22
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.24
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A339.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.93
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.59
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B97.79
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.64
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C325.49
Mouse Granule cells, donor2.CNhs12357.11731-123E319.04
Mouse Granule cells, donor3.CNhs12108.11636-122C725.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F526.33
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.02
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.01
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D225.48
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.06
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.65
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.18
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D429.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.05
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E531.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.69
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.60
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.96
Mouse Schwann, donor1.CNhs12507.11728-123D94.54
Mouse Schwann, donor2.CNhs12573.11746-123F96.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.89
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.67
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D75.49
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F57.99
adrenal gland, neonate N00.CNhs11191.1311-23C15.76
adrenal gland, neonate N25.CNhs11223.1377-27I35.65
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H18.10
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F514.40
bone (os femoris), neonate N16.CNhs11225.1525-43A69.50
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B247.14
cerebellum, neonate N30.CNhs11135.1395-42I250.27
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A442.39
corpus striatum, adult.CNhs10487.19-21D859.93
corpus striatum, neonate N00.CNhs11226.630-43F144.10
cortex, adult.CNhs10473.12-14D548.50
cortex, neonate N30.CNhs11107.1392-42F251.14
diencephalon, adult.CNhs10482.20-12F241.56
diencephalon, neonate N30.CNhs11201.1388-42B258.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.84
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.71
epididymis, adult.CNhs10490.58-23B216.43
eyeball, adult.CNhs10484.31-12G420.20
eyeball, embryo E12.CNhs11016.345-16C617.31
eyeball, embryo E14.CNhs10521.399-16E217.47
eyeball, embryo E15.CNhs10593.426-16C918.91
eyeball, embryo E17.CNhs11023.1261-18D429.54
eyeball, neonate N00.CNhs11207.633-15C631.84
eyeball, neonate N01.CNhs11140.1532-43E737.54
eyeball, neonate N02.CNhs11205.1551-44G822.86
eyeball, neonate N16.CNhs11188.777-19A240.36
forelimb, embryo E11.CNhs10596.335-25E27.76
forelimb, embryo E12.CNhs10600.359-14H211.16
forelimb, embryo E13.CNhs10589.384-1E210.91
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E712.23
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B513.58
gonad, embryo E13.CNhs11044.1564-45I67.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E910.36
heart, embryo E12.CNhs11015.353-12F59.85
heart, embryo E13.CNhs11013.376-3I912.42
heart, embryo E14.CNhs10597.403-26D49.71
heart, embryo E15.CNhs11017.431-16C816.33
heart, embryo E16.CNhs11021.457-17C614.50
heart, embryo E17.CNhs11025.479-18E513.25
heart, embryo E18.CNhs11030.1283-20G310.46
heart, neonate N00.CNhs11213.639-21E38.52
heart, neonate N03.CNhs11221.1349-25I211.03
heart, neonate N10.CNhs11118.749-24G110.84
heart, neonate N16.CNhs11209.782-15G111.19
heart, neonate N20.CNhs11127.821-26I611.55
heart, neonate N25.CNhs11196.1351-25D39.44
heart, neonate N30.CNhs11202.1390-42D210.47
hippocampus, adult.CNhs10478.13-16E843.74
hippocampus, neonate N00.CNhs11228.627-43G131.28
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I510.45
intestine, embryo E13.CNhs11010.381-16D510.92
intestine, embryo E15.CNhs10602.976-16D812.63
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D315.57
intestine, embryo E18.CNhs10526.1289-20F713.32
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E911.03
intestine, neonate N06.CNhs11102.688-20B812.06
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A514.04
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E39.08
intestine, neonate N30.CNhs11131.1384-42G18.16
kidney, embryo E14.CNhs10606.411-4I98.16
kidney, embryo E15.CNhs10997.434-16F810.51
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I211.81
kidney, embryo E18.CNhs11001.1288-20C713.19
kidney, neonate N00.CNhs11214.646-21G78.35
kidney, neonate N10.CNhs11206.758-6D513.15
kidney, neonate N20.CNhs11113.832-19I114.61
kidney, neonate N25.CNhs11122.1353-25F316.01
kidney, neonate N30.CNhs11203.1385-42H112.22
liver, adult pregnant day01.CNhs10466.508-5B28.30
liver, embryo E12.CNhs10601.355-15F86.51
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F55.55
liver, embryo E17.CNhs10510.481-18A37.64
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B910.92
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H17.53
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B15.91
lung, embryo E12.CNhs10522.354-16G210.99
lung, embryo E14.CNhs10604.404-26F811.90
lung, embryo E15.CNhs11020.432-17C513.92
lung, embryo E16.CNhs10998.458-17B613.38
lung, embryo E17.CNhs10605.480-44A69.55
lung, embryo E18.CNhs10583.1287-20I69.05
lung, neonate N00.CNhs11224.640-42C610.73
lung, neonate N06.CNhs11212.683-20E513.24
lung, neonate N07.CNhs11111.715-19A310.19
lung, neonate N10.CNhs11219.750-23E610.52
lung, neonate N20.CNhs11109.822-18A48.03
lung, neonate N25.CNhs11119.1359-25C78.12
lung, neonate N30.CNhs11133.1394-42H28.10
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C228.90
medulla oblongata, neonate N30.CNhs11200.1396-42A336.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C229.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.63
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.65
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.39
olfactory brain, adult.CNhs10489.18-22I955.59
ovary, adult.CNhs10507.91-2I78.52
ovary, embryo E18.CNhs11040.505-44H710.51
ovary, neonate N00.CNhs11217.1299-22I412.54
oviduct, adult pregnant day01.CNhs10500.988-6G616.50
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E515.28
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I714.45
pancreas, neonate N00.CNhs11105.645-26G912.15
pancreas, neonate N01.CNhs11138.1531-43D718.18
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B612.96
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G820.43
pituitary gland, embryo E12.CNhs11018.346-16E615.49
pituitary gland, embryo E13.CNhs11009.370-44C710.22
pituitary gland, embryo E14.CNhs11037.398-44A516.93
pituitary gland, embryo E15.CNhs10592.427-16B920.04
pituitary gland, embryo E16.CNhs11036.449-43F617.12
pituitary gland, embryo E17.CNhs11039.1265-44F517.11
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C314.67
skin, neonate N00.CNhs11124.650-25G48.88
skin, neonate N03.CNhs11215.662-22H38.44
skin, neonate N06.CNhs11097.693-20I56.80
skin, neonate N10.CNhs11108.762-6C47.71
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C929.30
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C110.11
spleen, embryo E18.CNhs11011.1271-21F28.52
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H13.69
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E310.28
stomach, embryo E15.CNhs10603.1252-16G817.28
stomach, embryo E16.CNhs11022.459-17D425.49
stomach, embryo E17.CNhs11006.1035-18D518.82
stomach, embryo E18.CNhs10999.1286-20C620.96
stomach, neonate N03.CNhs11193.1340-24B814.84
stomach, neonate N07.CNhs11210.718-18A912.73
stomach, neonate N25.CNhs11104.1355-25E49.95
stomach, neonate N30.CNhs11134.1386-42I19.59
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G5131.90
testis, embryo E13.CNhs11031.389-23F55.38
testis, embryo E15.CNhs11034.443-27C57.45
testis, embryo E16.CNhs11033.470-26G58.17
testis, embryo E17.CNhs11029.486-18I58.40
testis, embryo E18.CNhs11027.503-18G58.28
testis, neonate N00.CNhs11189.1300-22B75.40
testis, neonate N07.CNhs11222.726-26I49.11
testis, neonate N10.CNhs11204.763-44D918.04
testis, neonate N20.CNhs11110.839-18H385.04
testis, neonate N30.CNhs11130.1391-42E291.02
thymus, adult.CNhs10471.38-12B58.22
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I29.55
thymus, embryo E16.CNhs11002.456-26C56.76
thymus, embryo E17.CNhs10581.478-18C110.03
thymus, embryo E18.CNhs10595.1273-19G48.94
thymus, neonate N02.CNhs11181.1541-43F85.53
thymus, neonate N03.CNhs11137.2104-43C711.52
thymus, neonate N06.CNhs11197.681-26C48.38
thymus, neonate N07.CNhs11211.713-19D38.76
thymus, neonate N10.CNhs11194.748-24E47.76
thymus, neonate N20.CNhs11186.820-7A26.43
thymus, neonate N25.CNhs11125.1362-25G76.73
thymus, neonate N30.CNhs11132.1393-42G25.14
tongue, adult.CNhs10499.32-1B410.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E46.95
uterus, adult pregnant day19.CNhs10497.590-15F56.38
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A160.43
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A265.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A368.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D751.21
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A459.60
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A568.74
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A661.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A750.89
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A852.56
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A952.29
whole body, embryo E11.CNhs11014.324-5I815.57
whole body, embryo E12.CNhs10587.857-27C914.36
whole body, embryo E13.CNhs10512.372-23H217.93
whole body, embryo E14.5.CNhs10578.420-27D213.86
whole body, embryo E14.CNhs10519.395-14B117.82
whole body, embryo E16.CNhs10514.453-14F218.75
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.75
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.24
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G524.33
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G522.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G521.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.41
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.31
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G525.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.23
whole body, embryo E17.5.CNhs10513.490-9F914.47
whole body, embryo E17.CNhs10517.475-3I515.24
whole body, embryo E18.CNhs10516.493-3B315.67
whole body, neonate N00.CNhs10525.657-19C213.11
whole body, neonate N01.CNhs10576.659-23C613.20
whole body, neonate N06.CNhs10515.692-21D112.35
whole body, neonate N10.CNhs10518.761-6B416.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.74e-1023
neuroblast (sensu Vertebrata)7.74e-1023
neuron1.10e-0833
neuronal stem cell1.10e-0833
neuroblast1.10e-0833
electrically signaling cell1.10e-0833

Uber anatomy
Ontology termp-valuen
neurectoderm2.90e-2164
neural plate2.90e-2164
presumptive neural plate2.90e-2164
ecto-epithelium2.38e-1973
regional part of nervous system3.18e-1954
pre-chordal neural plate2.60e-1849
neural tube4.63e-1852
neural rod4.63e-1852
future spinal cord4.63e-1852
neural keel4.63e-1852
central nervous system5.96e-1873
ectoderm-derived structure3.73e-1795
ectoderm3.73e-1795
presumptive ectoderm3.73e-1795
nervous system8.58e-1775
brain2.70e-1647
future brain2.70e-1647
regional part of brain1.17e-1546
structure with developmental contribution from neural crest6.63e-1592
anterior neural tube8.73e-1540
gray matter1.59e-1434
regional part of forebrain3.28e-1439
forebrain3.28e-1439
future forebrain3.28e-1439
brain grey matter9.13e-1329
regional part of telencephalon9.13e-1329
telencephalon9.13e-1329
cerebral cortex5.07e-0921
cerebral hemisphere5.07e-0921
pallium5.07e-0921
occipital lobe6.70e-0810
visual cortex6.70e-0810
neocortex6.70e-0810
tissue1.15e-07349
regional part of cerebral cortex3.81e-0717
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