FFCP PHASE1:Mm9::chr2:140221182..140221201,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72899 | |EntrezGene=72899 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000124403,ENSMUST00000154505,uc012cfa.1_5end | |association_with_transcript=0bp_to_ENSMUST00000124403,ENSMUST00000154505,uc012cfa.1_5end | ||
|cluster_id=chr2:140221182..140221201,+ | |||
|description=CAGE_peak_1_at_Macrod2_5end | |description=CAGE_peak_1_at_Macrod2_5end | ||
|id=chr2:140221182..140221201,+ | |id=chr2:140221182..140221201,+ | ||
|ontology_enrichment_celltype=CL:0000117!7.77e-10!23;CL:0000337!7.77e-10!23;CL:0000540!1.10e-08!33;CL:0000047!1.10e-08!33;CL:0000031!1.10e-08!33;CL:0000404!1.10e-08!33 | |ontology_enrichment_celltype=CL:0000117!7.77e-10!23;CL:0000337!7.77e-10!23;CL:0000540!1.10e-08!33;CL:0000047!1.10e-08!33;CL:0000031!1.10e-08!33;CL:0000404!1.10e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.74e-10,23;CL:0000337,7.74e-10,23;CL:0000540,1.10e-08,33;CL:0000047,1.10e-08,33;CL:0000031,1.10e-08,33;CL:0000404,1.10e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.12e-21!63;UBERON:0003056!2.62e-18!49;UBERON:0001049!4.67e-18!52;UBERON:0005068!4.67e-18!52;UBERON:0006241!4.67e-18!52;UBERON:0007135!4.67e-18!52;UBERON:0001017!6.01e-18!73;UBERON:0005743!6.01e-18!73;UBERON:0000955!6.11e-18!50;UBERON:0006238!6.11e-18!50;UBERON:0002616!2.73e-17!49;UBERON:0002346!3.01e-17!71;UBERON:0003075!3.01e-17!71;UBERON:0007284!3.01e-17!71;UBERON:0000073!8.64e-17!75;UBERON:0001016!8.64e-17!75;UBERON:0003080!8.78e-15!40;UBERON:0002020!1.60e-14!34;UBERON:0004121!1.78e-14!102;UBERON:0000924!1.78e-14!102;UBERON:0006601!1.78e-14!102;UBERON:0002780!3.30e-14!39;UBERON:0001890!3.30e-14!39;UBERON:0006240!3.30e-14!39;UBERON:0002791!9.18e-13!29;UBERON:0003528!9.18e-13!29;UBERON:0001893!9.18e-13!29;UBERON:0007811!2.05e-12!86;UBERON:0000153!1.39e-11!94;UBERON:0000468!1.25e-09!333;UBERON:0000956!5.09e-09!21;UBERON:0001869!5.09e-09!21;UBERON:0000203!5.09e-09!21;UBERON:0002021!6.72e-08!10;UBERON:0000411!6.72e-08!10;UBERON:0001950!6.72e-08!10;UBERON:0000479!1.34e-07!349;UBERON:0002619!3.82e-07!17;UBERON:0000922!4.66e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.90e-21,64;UBERON:0003075,2.90e-21,64;UBERON:0007284,2.90e-21,64;UBERON:0010371,2.38e-19,73;UBERON:0000073,3.18e-19,54;UBERON:0003056,2.60e-18,49;UBERON:0001049,4.63e-18,52;UBERON:0005068,4.63e-18,52;UBERON:0006241,4.63e-18,52;UBERON:0007135,4.63e-18,52;UBERON:0001017,5.96e-18,73;UBERON:0004121,3.73e-17,95;UBERON:0000924,3.73e-17,95;UBERON:0006601,3.73e-17,95;UBERON:0001016,8.58e-17,75;UBERON:0000955,2.70e-16,47;UBERON:0006238,2.70e-16,47;UBERON:0002616,1.17e-15,46;UBERON:0010314,6.63e-15,92;UBERON:0003080,8.73e-15,40;UBERON:0002020,1.59e-14,34;UBERON:0002780,3.28e-14,39;UBERON:0001890,3.28e-14,39;UBERON:0006240,3.28e-14,39;UBERON:0003528,9.13e-13,29;UBERON:0002791,9.13e-13,29;UBERON:0001893,9.13e-13,29;UBERON:0000956,5.07e-09,21;UBERON:0001869,5.07e-09,21;UBERON:0000203,5.07e-09,21;UBERON:0002021,6.70e-08,10;UBERON:0000411,6.70e-08,10;UBERON:0001950,6.70e-08,10;UBERON:0000479,1.15e-07,349;UBERON:0002619,3.81e-07,17 | |||
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| ||
|short_description=p1@Macrod2 | |short_description=p1@Macrod2 | ||
}} | }} |
Latest revision as of 19:55, 25 September 2015
Short description: | p1@Macrod2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Macrod2_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000124403, ENSMUST00000154505, uc012cfa.1_5end |
EntrezGene: | Macrod2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.74e-10 | 23 |
neuroblast (sensu Vertebrata) | 7.74e-10 | 23 |
neuron | 1.10e-08 | 33 |
neuronal stem cell | 1.10e-08 | 33 |
neuroblast | 1.10e-08 | 33 |
electrically signaling cell | 1.10e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.90e-21 | 64 |
neural plate | 2.90e-21 | 64 |
presumptive neural plate | 2.90e-21 | 64 |
ecto-epithelium | 2.38e-19 | 73 |
regional part of nervous system | 3.18e-19 | 54 |
pre-chordal neural plate | 2.60e-18 | 49 |
neural tube | 4.63e-18 | 52 |
neural rod | 4.63e-18 | 52 |
future spinal cord | 4.63e-18 | 52 |
neural keel | 4.63e-18 | 52 |
central nervous system | 5.96e-18 | 73 |
ectoderm-derived structure | 3.73e-17 | 95 |
ectoderm | 3.73e-17 | 95 |
presumptive ectoderm | 3.73e-17 | 95 |
nervous system | 8.58e-17 | 75 |
brain | 2.70e-16 | 47 |
future brain | 2.70e-16 | 47 |
regional part of brain | 1.17e-15 | 46 |
structure with developmental contribution from neural crest | 6.63e-15 | 92 |
anterior neural tube | 8.73e-15 | 40 |
gray matter | 1.59e-14 | 34 |
regional part of forebrain | 3.28e-14 | 39 |
forebrain | 3.28e-14 | 39 |
future forebrain | 3.28e-14 | 39 |
brain grey matter | 9.13e-13 | 29 |
regional part of telencephalon | 9.13e-13 | 29 |
telencephalon | 9.13e-13 | 29 |
cerebral cortex | 5.07e-09 | 21 |
cerebral hemisphere | 5.07e-09 | 21 |
pallium | 5.07e-09 | 21 |
occipital lobe | 6.70e-08 | 10 |
visual cortex | 6.70e-08 | 10 |
neocortex | 6.70e-08 | 10 |
tissue | 1.15e-07 | 349 |
regional part of cerebral cortex | 3.81e-07 | 17 |