FFCP PHASE1:Mm9::chr3:88425024..88425052,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16800 | |EntrezGene=16800 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q60875 | |UniProt=Q60875 | ||
|association_with_transcript=0bp_to_ENSMUST00000029694,NM_008487,uc008pvw.2,uc008pvx.2_5end | |association_with_transcript=0bp_to_ENSMUST00000029694,NM_008487,uc008pvw.2,uc008pvx.2_5end | ||
|cluster_id=chr3:88425024..88425052,+ | |||
|description=CAGE_peak_3_at_Arhgef2_5end | |description=CAGE_peak_3_at_Arhgef2_5end | ||
|id=chr3:88425024..88425052,+ | |id=chr3:88425024..88425052,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-14!45;UBERON:0003061!1.49e-14!45;UBERON:0002193!4.95e-14!48;UBERON:0001004!2.39e-12!42;UBERON:0000065!8.05e-12!41;UBERON:0003081!1.52e-11!88;UBERON:0000072!2.37e-10!27;UBERON:0003408!3.22e-10!24;UBERON:0004177!5.04e-10!29;UBERON:0002370!1.11e-09!23;UBERON:0000974!1.11e-09!23;UBERON:0004807!1.11e-09!23;UBERON:0005058!1.11e-09!23;UBERON:0003351!1.11e-09!23;UBERON:0009113!1.11e-09!23;UBERON:0003295!1.11e-09!23;UBERON:0009722!1.11e-09!23;UBERON:0005562!1.11e-09!23;UBERON:0007690!1.11e-09!23;UBERON:0006562!3.86e-09!24;UBERON:0001557!3.86e-09!24;UBERON:0001042!3.86e-09!24;UBERON:0008814!3.86e-09!24;UBERON:0009145!3.86e-09!24;UBERON:0000063!7.68e-09!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.40e-14,45;UBERON:0003061,1.40e-14,45;UBERON:0002193,4.66e-14,48;UBERON:0002405,4.66e-14,48;UBERON:0001004,2.25e-12,42;UBERON:0000065,7.59e-12,41;UBERON:0003081,3.64e-11,87;UBERON:0000072,2.22e-10,27;UBERON:0000077,2.87e-10,35;UBERON:0003408,3.01e-10,24;UBERON:0004177,4.73e-10,29;UBERON:0005057,4.73e-10,29;UBERON:0002370,1.04e-09,23;UBERON:0000974,1.04e-09,23;UBERON:0004807,1.04e-09,23;UBERON:0005058,1.04e-09,23;UBERON:0003351,1.04e-09,23;UBERON:0009113,1.04e-09,23;UBERON:0003295,1.04e-09,23;UBERON:0009722,1.04e-09,23;UBERON:0005562,1.04e-09,23;UBERON:0007690,1.04e-09,23;UBERON:0006562,3.62e-09,24;UBERON:0001557,3.62e-09,24;UBERON:0001042,3.62e-09,24;UBERON:0008814,3.62e-09,24;UBERON:0009145,3.62e-09,24 | |||
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| |phase1_expression=2.88267924788629,1.04692622291808,1.36499771816861,0,0,3.52546471014969,4.43864017131499,9.29687928779349,7.74337971834167,9.12851652655775,8.56089841127525,10.9287857823611,13.8672591244277,12.7633787531736,5.3297561890506,4.656931149966,4.19737126876888,10.567982539501,8.5010948835558,8.48779303596061,5.27268398936633,4.96454756004426,3.13439746966722,1.75991665072747,4.81759490241057,2.29692785646008,0.430761996159075,3.66301095566011,0.570070258369122,2.26827116783938,1.55211357458713,4.44521471421742,5.53558308826113,0,1.1554064790051,1.82858109894342,1.42918549383658,11.3003540298965,8.5946887897618,11.5175223674236,15.2940186888064,30.0540013381716,14.0798002379035,3.02152363141385,2.63580021170738,4.40512205188036,4.69434806608824,3.92445281484804,3.51497892375155,3.69416808241138,4.89952475688769,4.31257693094915,7.21465206048266,3.62681071005672,8.73843877770406,1.54355661621568,2.0057340795713,2.57836046138721,6.27181028664753,4.7609188134483,3.80298842103708,3.04960078862219,3.55717918444456,5.84934816232909,8.89979726310277,11.3676818391376,6.2916023208865,6.53171119046643,13.5833392124106,13.3655878948374,14.302097371894,3.99911378165325,1.76694832761291,14.6988959057945,15.7186572469908,14.7075005857603,4.40463523997555,4.97980618532232,4.76180253094355,5.53922408466814,4.66586982372289,2.6045668527838,3.62937898701795,5.06486349028512,3.97275444219706,2.65165726926301,3.13217697758026,3.72798891650601,6.51245262665383,9.14415877292105,12.4641730141721,3.44169550792555,0,0,0,0.896053774194671,1.96622188184453,4.60161870960756,4.1565760736459,4.94675404314476,1.97180787687353,10.2661181931454,17.8363667794652,0,7.79367747640371,8.10751569520315,7.58286667522175,2.39786147410026,8.2860122767095,3.26572705942614,5.20455980298408,1.82679286987285,2.53677046981664,2.26083960828934,3.88042733547826,2.76466500925286,1.73036477414062,3.32578520915797,4.42305275974937,4.52947179852746,3.5334642953663,4.84875253135222,3.72783522436244,5.27005434620785,8.3778682725382,1.78819938646014,7.90779821739074,4.19931911695385,3.55796635804581,4.19413790333504,5.49000723382352,11.3088916901578,3.12883776346098,2.55715457330331,4.1557608911912,3.89379031362618,3.7680564624617,5.10068579501381,3.28539585963777,2.31486041475121,2.60240885925407,2.5289231487682,4.68161537493908,3.16480117455002,3.12967896096108,3.58718416797579,3.74806898238915,1.55222022443409,4.74249584452253,6.42960672570586,6.15828934573821,4.3839146485515,4.44875598760957,4.179025998266,4.93877127379064,2.58744546864041,5.61770549850588,6.94839349209731,6.25159698670304,4.76389276831654,3.28336483973535,5.04173772090842,4.49814997611899,7.08351234290654,7.40482141859416,6.0458825635106,7.24338183778972,4.78737903705395,8.88623189532794,4.43252153013557,5.18840381093477,5.70179950958796,6.36695334344047,4.83143107537338,2.10289948564127,6.48299057989492,0.660837565967596,1.05780226665418,4.90562976231038,5.57368012465052,4.63922860759536,5.64713868945359,3.55804870151792,2.85338439168839,1.89811624617805,3.12928013975621,3.01602250560323,0.795825888164603,1.16978452271472,2.69645822596266,2.16138049874694,1.7922714592893,3.41402221715547,4.22719496655997,3.38123207019241,2.64746726198909,5.62462212786115,4.48869247298039,6.13394410105296,4.72352473534727,8.00693511991011,4.93588655687202,0.592905254174298,2.16898637430922,2.75182593158484,2.02375901146368,2.43432145666204,2.65294875727659,2.03700681425136,3.16465751195892,1.78348749452539,1.92192989231657,5.75072826109418,1.48856379067401,1.87222603868736,1.01031551178845,0.896987067609561,0,5.72734889516475,3.41084541186873,5.70377417547091,4.2436271443797,4.92849521405854,5.19269398069629,4.28478553594825,6.24427673144956,5.2019597555043,5.75808193086815,9.24837658213425,7.86543910635542,7.7708241839653,7.37710198765709,7.53956419696361,7.61467957346193,2.95058563811422,2.48343071674259,3.53211297973142,5.86058432961016,3.11476396215683,3.53459298086122,5.04813151066011,5.46614242015294,6.67812532971677,4.30143836314594,4.67877215573028,7.07691326972081,5.26253912177363,3.79932615284705,5.53402889125133,7.71171159412337,4.5420827266646,3.91744328067962,5.53815661802159,5.93892442701128,0,3.15614827001476,5.44182402536552,0.943025398779491,3.54362271456927,2.76691633149535,3.10113951801865,2.18120237686503,4.63446591900138,3.79244109522979,2.10837217149998,2.06271086496374,1.70219802876894,3.42116078659489,4.65691261617916,3.64372959553707,3.72414490648775,3.21063871683727,2.96188237083818,2.13125464380219,5.16277757740163,6.77862626764225,0.882113592219848,3.79238381765404,4.68246837418126,4.22190474497091,4.05865969610664,3.77524069413641,1.45740418314925,4.07935664423121,4.44264290074417,5.98521917093345,4.8150577116125,5.46268525313604,6.15124024744613,5.94823250336959,6.79913719975421,7.83728133012485,7.87739850685216,6.68269432610579,4.9032079005076,3.04979200690273,4.10420295122845,5.43629569637619,3.27543845619266,4.31565908431426,6.36431609085087,7.0674104335688,1.16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| ||
|short_description=p3@Arhgef2 | |short_description=p3@Arhgef2 | ||
}} | }} |
Latest revision as of 20:03, 25 September 2015
Short description: | p3@Arhgef2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arhgef2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000029694, NM_008487, uc008pvw.2, uc008pvx.2_5end |
EntrezGene: | Arhgef2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.40e-14 | 45 |
blood island | 1.40e-14 | 45 |
hemolymphoid system | 4.66e-14 | 48 |
immune system | 4.66e-14 | 48 |
respiratory system | 2.25e-12 | 42 |
respiratory tract | 7.59e-12 | 41 |
lateral plate mesoderm | 3.64e-11 | 87 |
segment of respiratory tract | 2.22e-10 | 27 |
mixed endoderm/mesoderm-derived structure | 2.87e-10 | 35 |
gland of gut | 3.01e-10 | 24 |
hemopoietic organ | 4.73e-10 | 29 |
immune organ | 4.73e-10 | 29 |
thymus | 1.04e-09 | 23 |
neck | 1.04e-09 | 23 |
respiratory system epithelium | 1.04e-09 | 23 |
hemolymphoid system gland | 1.04e-09 | 23 |
pharyngeal epithelium | 1.04e-09 | 23 |
thymic region | 1.04e-09 | 23 |
pharyngeal gland | 1.04e-09 | 23 |
entire pharyngeal arch endoderm | 1.04e-09 | 23 |
thymus primordium | 1.04e-09 | 23 |
early pharyngeal endoderm | 1.04e-09 | 23 |
pharynx | 3.62e-09 | 24 |
upper respiratory tract | 3.62e-09 | 24 |
chordate pharynx | 3.62e-09 | 24 |
pharyngeal arch system | 3.62e-09 | 24 |
pharyngeal region of foregut | 3.62e-09 | 24 |