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FFCP PHASE1:Mm9::chr3:89083505..89083516,-: Difference between revisions

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{{FFCP|EntrezGene=13636|HGNC=|MCL_coexpression_id=1642|UniProt=D3Z7A6|association_with_transcript=46bp_to_ENSMUST00000118860_5end|description=CAGE_peak_3_at_Efna1_5end|id=chr3:89083505..89083516,-|ontology_enrichment_celltype=CL:0000066!4.48e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,1.91e-09,25;CL:0000223,2.21e-07,20;CL:0002563,4.59e-07,9;CL:0002251,4.59e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!3.63e-11!66;UBERON:0004119!2.08e-09!130;UBERON:0000925!2.08e-09!130;UBERON:0006595!2.08e-09!130;UBERON:0001007!2.30e-09!128;UBERON:0001555!2.30e-09!128;UBERON:0007026!2.30e-09!128;UBERON:0004921!3.77e-09!126;UBERON:0004185!3.77e-09!126;UBERON:0005177!4.05e-08!85;UBERON:0000160!6.49e-08!43;UBERON:0005178!2.13e-07!17;UBERON:0005181!2.13e-07!17;UBERON:0002224!2.13e-07!17;UBERON:0000915!2.13e-07!17;UBERON:0008947!2.13e-07!17;UBERON:0003258!2.13e-07!17;UBERON:0005153!3.13e-07!17;UBERON:0001242!3.45e-07!13;UBERON:0000060!3.45e-07!13;UBERON:0001262!3.45e-07!13;UBERON:0004786!3.45e-07!13;UBERON:0005409!4.74e-07!59;UBERON:0000344!4.99e-07!15;UBERON:0002048!8.65e-07!14;UBERON:0000117!8.65e-07!14;UBERON:0000171!8.65e-07!14;UBERON:0000170!8.65e-07!14;UBERON:0005597!8.65e-07!14;UBERON:0000118!8.65e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.31e-14,31;UBERON:0004119,5.05e-14,118;UBERON:0000925,5.05e-14,118;UBERON:0006595,5.05e-14,118;UBERON:0004921,1.04e-13,114;UBERON:0001007,1.11e-13,116;UBERON:0001555,1.11e-13,116;UBERON:0007026,1.11e-13,116;UBERON:0009569,1.38e-11,66;UBERON:0005409,2.04e-11,47;UBERON:0001242,1.15e-09,13;UBERON:0001262,1.15e-09,13;UBERON:0004786,1.15e-09,13;UBERON:0000344,8.31e-09,15;UBERON:0005177,1.06e-08,79;UBERON:0005178,1.27e-07,17;UBERON:0005181,1.27e-07,17;UBERON:0002224,1.27e-07,17;UBERON:0000915,1.27e-07,17;UBERON:0008947,1.27e-07,17;UBERON:0003258,1.27e-07,17;UBERON:0002048,2.69e-07,14;UBERON:0000117,2.69e-07,14;UBERON:0000171,2.69e-07,14;UBERON:0000170,2.69e-07,14;UBERON:0005597,2.69e-07,14;UBERON:0000118,2.69e-07,14;UBERON:0005153,2.69e-07,17;UBERON:0003350,4.59e-07,9;UBERON:0004808,4.59e-07,9;UBERON:0001277,4.59e-07,9;UBERON:0005911,6.22e-07,69|phase1_expression=0.80074423552397,9.42233600626275,8.18998630901165,6.35174843744343,8.5152274090879,1.17515490338323,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.11994695955385,0.68822784320151,9.18771142584032,3.87685796543167,3.878482188346,4.75058548640935,1.76421090831952,1.33038306393183,0,0,0,1.1554064790051,1.99481574430191,2.6542016314108,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0.218025156380447,1.5378032791413,0.58328969722285,0,1.43752564364972,0,0,0,0,0.85960031981627,0.515672092277442,0.404632921719196,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0.103689612308478,0.540023753326763,0.210324961351382,0.571301968807607,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0,0.395658863190582,0.0914876436024097,0,0,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0.151452386666368,0.0755715601067855,2.02905142091174,19.7897491705719,44.8781080247115,13.4925797909454,3.89865850468601,0.448026887097336,1.12355536105401,0.340860645156116,0.259786004602869,0,1.54927761754349,0,0,0,1.73192832808971,0.760079596425296,2.02209778005913,1.48439043634778,0.517875767294343,0.445326417194474,0.346970653532272,0.913396434936424,1.15307748628029,0.452167921657868,1.17588707135705,0,1.73036477414062,0.578397427679647,0,0.485300549842228,0,0,0,0,1.04723353406728,2.55457055208591,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0,0,1.12023300235348,0.622034853050465,1.0108910337347,1.47309299120532,0.390361328888111,0.459804208866946,0.540186389416048,0.90422890701429,0.408218994907967,0.512454881139399,0.374806898238915,0,0.862271971731369,0.756424320671277,0.527853372491847,1.31517439456545,0.834141747676794,1.39300866608867,2.05782136407943,1.59227413454795,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,1.77087808572663,0.617068451549513,0.930135779001631,0,1.75148013550754,0,0.985004784474571,1.54030738137126,1.75439984910399,0.878200461164203,1.20785776884335,0.210289948564127,0.102904612379284,6.93879444265976,5.55346189993443,0.639864751605702,0.928946687441754,1.67527699718721,1.81515172161008,2.00140239460383,2.47293313946327,0.949058123089023,3.78807595865225,2.26201687920243,6.36660710531683,3.31438948102504,0,2.59365659849633,4.97853183135918,1.70701110857774,0.685491075658373,1.1270773567308,1.62921062276251,1.35766741017338,1.61312385747733,2.15004226222475,1.03327103585722,1.09899109488962,1.48076596706161,1.77871576252289,0.333690211432188,0.196558995113203,0,0.405720242777006,0.482354319504834,0.50925170356284,1.43848068725405,2.91843408195064,0.823684239564244,2.87536413054709,5.95425516269605,1.24815069245824,2.27320990152401,2.33216637578486,4.82443521363367,2.40179147216586,0.947457058852424,1.14075483509418,1.01847051465113,0.9387609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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13636
|HGNC=
|MCL_coexpression_id=1642
|TSSclassifier=NA
|UniProt=D3Z7A6
|association_with_transcript=46bp_to_ENSMUST00000118860_5end
|cluster_id=chr3:89083505..89083516,-
|description=CAGE_peak_3_at_Efna1_5end
|id=chr3:89083505..89083516,-
|ontology_enrichment_celltype=CL:0000066!4.48e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,1.91e-09,25;CL:0000223,2.21e-07,20;CL:0002563,4.59e-07,9;CL:0002251,4.59e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.31e-14,31;UBERON:0004119,5.05e-14,118;UBERON:0000925,5.05e-14,118;UBERON:0006595,5.05e-14,118;UBERON:0004921,1.04e-13,114;UBERON:0001007,1.11e-13,116;UBERON:0001555,1.11e-13,116;UBERON:0007026,1.11e-13,116;UBERON:0009569,1.38e-11,66;UBERON:0005409,2.04e-11,47;UBERON:0001242,1.15e-09,13;UBERON:0001262,1.15e-09,13;UBERON:0004786,1.15e-09,13;UBERON:0000344,8.31e-09,15;UBERON:0005177,1.06e-08,79;UBERON:0005178,1.27e-07,17;UBERON:0005181,1.27e-07,17;UBERON:0002224,1.27e-07,17;UBERON:0000915,1.27e-07,17;UBERON:0008947,1.27e-07,17;UBERON:0003258,1.27e-07,17;UBERON:0002048,2.69e-07,14;UBERON:0000117,2.69e-07,14;UBERON:0000171,2.69e-07,14;UBERON:0000170,2.69e-07,14;UBERON:0005597,2.69e-07,14;UBERON:0000118,2.69e-07,14;UBERON:0005153,2.69e-07,17;UBERON:0003350,4.59e-07,9;UBERON:0004808,4.59e-07,9;UBERON:0001277,4.59e-07,9;UBERON:0005911,6.22e-07,69
|phase1_expression=0.80074423552397,9.42233600626275,8.18998630901165,6.35174843744343,8.5152274090879,1.17515490338323,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,1.11994695955385,0.68822784320151,9.18771142584032,3.87685796543167,3.878482188346,4.75058548640935,1.76421090831952,1.33038306393183,0,0,0,1.1554064790051,1.99481574430191,2.6542016314108,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0.218025156380447,1.5378032791413,0.58328969722285,0,1.43752564364972,0,0,0,0,0.85960031981627,0.515672092277442,0.404632921719196,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0.103689612308478,0.540023753326763,0.210324961351382,0.571301968807607,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0,0.395658863190582,0.0914876436024097,0,0,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0.151452386666368,0.0755715601067855,2.02905142091174,19.7897491705719,44.8781080247115,13.4925797909454,3.89865850468601,0.448026887097336,1.12355536105401,0.340860645156116,0.259786004602869,0,1.54927761754349,0,0,0,1.73192832808971,0.760079596425296,2.02209778005913,1.48439043634778,0.517875767294343,0.445326417194474,0.346970653532272,0.913396434936424,1.15307748628029,0.452167921657868,1.17588707135705,0,1.73036477414062,0.578397427679647,0,0.485300549842228,0,0,0,0,1.04723353406728,2.55457055208591,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0,0,1.12023300235348,0.622034853050465,1.0108910337347,1.47309299120532,0.390361328888111,0.459804208866946,0.540186389416048,0.90422890701429,0.408218994907967,0.512454881139399,0.374806898238915,0,0.862271971731369,0.756424320671277,0.527853372491847,1.31517439456545,0.834141747676794,1.39300866608867,2.05782136407943,1.59227413454795,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,1.77087808572663,0.617068451549513,0.930135779001631,0,1.75148013550754,0,0.985004784474571,1.54030738137126,1.75439984910399,0.878200461164203,1.20785776884335,0.210289948564127,0.102904612379284,6.93879444265976,5.55346189993443,0.639864751605702,0.928946687441754,1.67527699718721,1.81515172161008,2.00140239460383,2.47293313946327,0.949058123089023,3.78807595865225,2.26201687920243,6.36660710531683,3.31438948102504,0,2.59365659849633,4.97853183135918,1.70701110857774,0.685491075658373,1.1270773567308,1.62921062276251,1.35766741017338,1.61312385747733,2.15004226222475,1.03327103585722,1.09899109488962,1.48076596706161,1.77871576252289,0.333690211432188,0.196558995113203,0,0.405720242777006,0.482354319504834,0.50925170356284,1.43848068725405,2.91843408195064,0.823684239564244,2.87536413054709,5.95425516269605,1.24815069245824,2.27320990152401,2.33216637578486,4.82443521363367,2.40179147216586,0.947457058852424,1.14075483509418,1.01847051465113,0.938760993154008,2.68010011906905,3.33261097240419,3.90267295715598,2.36452716159286,3.10050565508285,2.87018583583477,2.62181303545181,2.59027472798843,3.7608755231193,0,0,1.96705709207614,1.10374698521893,0.321101179975584,0,1.63934945376675,1.26235463602186,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0.851640511249612,0.712262414669021,0.977321756121456,0.824850614862677,0,0.485561272309963,0.604647113929502,0.377210159511796,0.885905678642318,0.614870295887855,1.03371317267288,1.81766864738753,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,1.4229455216103,1.07168517515796,0.354680467284547,0.535106452806212,0.822745103010605,0.913394847343798,0,4.66030555900404,0.882113592219848,1.6488625294148,2.09903754704677,1.14594557363496,1.55184047204077,0.820704498725306,2.62332752966866,0,0,1.03193433981611,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0,0,1.42351197111511,0.406638934253697,0.972048067396211,0.418176592028937,0.436725127492355,1.61837215661785,1.73572257023205,1.83229159388821,4.66613903850454,0,0,0.598066184175915,1.32366792365678,0.583353565032143,0.258319646955462,0.168956125490778,0.469428954583016,0.13020438484395,0.104859344425711,0,0,0,0.810900861160657,0.308132871494482,0.389762468933385,0,0.596044064343795,0.120195449519969,0,0.201932899896295,0,0,0.194915761479505,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.965947970160952,1.12609485270709,0.73260649706906,1.2862102744744,2.00628841614145,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0.798049746802062,0.170733605754134,0.972426868273176,0,0,0.888986911206461,0.618105171716683,0.64183841918363,1.01078884705519,0.760437899670719,0.754505365544305,0.842773567228942,0.448176066834085,0.746661096422973,1.90517476513229,0.579421629724277,0.77163688185482,0.824171801606613,0.883193520806384,0.342869252385415,0.70990322463735,0,0.726732083161643,0.846984423737976,0.25384382367503,0.914639864363863,0.526139422875686,0.543216455383447,0.561142271657738,0.830445126869219,0.689531376628944,1.22769312950907,0.464810523557898,2.12197272079256,1.24905288968973,1.16965804222704,1.28922632428979,1.53030665655075,1.32354851471709,1.15933917810211
|short_description=p3@Efna1
}}

Latest revision as of 20:29, 25 September 2015

Short description:p3@Efna1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Efna1_5end
Coexpression cluster:MCL_coexpression_mm9:1642
Association with transcript: 46bp_to_ENSMUST00000118860_5end
EntrezGene:Efna1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Efna1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C444.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F26.37
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I14.67
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.91e-0925
endodermal cell2.21e-0720
intestinal epithelial cell4.59e-079
epithelial cell of alimentary canal4.59e-079

Uber anatomy
Ontology termp-valuen
intestine1.31e-1431
endoderm-derived structure5.05e-14118
endoderm5.05e-14118
presumptive endoderm5.05e-14118
subdivision of digestive tract1.04e-13114
digestive system1.11e-13116
digestive tract1.11e-13116
primitive gut1.11e-13116
subdivision of trunk1.38e-1166
gastrointestinal system2.04e-1147
intestinal mucosa1.15e-0913
wall of intestine1.15e-0913
gastrointestinal system mucosa1.15e-0913
mucosa8.31e-0915
trunk region element1.06e-0879
thoracic cavity element1.27e-0717
thoracic segment organ1.27e-0717
thoracic cavity1.27e-0717
thoracic segment of trunk1.27e-0717
respiratory primordium1.27e-0717
endoderm of foregut1.27e-0717
lung2.69e-0714
respiratory tube2.69e-0714
respiration organ2.69e-0714
pair of lungs2.69e-0714
lung primordium2.69e-0714
lung bud2.69e-0714
epithelial bud2.69e-0717
epithelium of mucosa4.59e-079
gastrointestinal system epithelium4.59e-079
intestinal epithelium4.59e-079
endo-epithelium6.22e-0769
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