FFCP PHASE1:Mm9::chr8:93837122..93837178,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=244585 | |EntrezGene=244585 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=813 | |||
|TSSclassifier=NA | |||
|UniProt=G3X958 | |UniProt=G3X958 | ||
|association_with_transcript=0bp_to_ENSMUST00000047783_5end | |association_with_transcript=0bp_to_ENSMUST00000047783_5end | ||
|cluster_id=chr8:93837122..93837178,- | |||
|description=CAGE_peak_1_at_Rpgrip1l_5end | |description=CAGE_peak_1_at_Rpgrip1l_5end | ||
|id=chr8:93837122..93837178,- | |id=chr8:93837122..93837178,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.05e-11!63;UBERON:0000153!6.02e-11!94;UBERON:0003056!7.03e-11!49;UBERON:0000955!1.55e-10!50;UBERON:0006238!1.55e-10!50;UBERON:0002616!4.29e-10!49;UBERON:0002346!4.75e-10!71;UBERON:0003075!4.75e-10!71;UBERON:0007284!4.75e-10!71;UBERON:0001049!2.96e-09!52;UBERON:0005068!2.96e-09!52;UBERON:0006241!2.96e-09!52;UBERON:0007135!2.96e-09!52;UBERON:0001017!7.58e-09!73;UBERON:0005743!7.58e-09!73;UBERON:0007811!7.77e-09!86;UBERON:0003080!1.97e-08!40;UBERON:0000073!2.35e-08!75;UBERON:0001016!2.35e-08!75;UBERON:0004121!2.98e-08!102;UBERON:0000924!2.98e-08!102;UBERON:0006601!2.98e-08!102;UBERON:0002780!6.85e-08!39;UBERON:0001890!6.85e-08!39;UBERON:0006240!6.85e-08!39;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10;UBERON:0000468!2.11e-07!333;UBERON:0000922!8.86e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.71e-12,64;UBERON:0003075,1.71e-12,64;UBERON:0007284,1.71e-12,64;UBERON:0010371,1.12e-11,73;UBERON:0003056,7.02e-11,49;UBERON:0004121,7.05e-10,95;UBERON:0000924,7.05e-10,95;UBERON:0006601,7.05e-10,95;UBERON:0000073,8.03e-10,54;UBERON:0000955,2.12e-09,47;UBERON:0006238,2.12e-09,47;UBERON:0001049,3.06e-09,52;UBERON:0005068,3.06e-09,52;UBERON:0006241,3.06e-09,52;UBERON:0007135,3.06e-09,52;UBERON:0002616,5.68e-09,46;UBERON:0001017,7.81e-09,73;UBERON:0003080,1.96e-08,40;UBERON:0001016,2.42e-08,75;UBERON:0002780,6.85e-08,39;UBERON:0001890,6.85e-08,39;UBERON:0006240,6.85e-08,39;UBERON:0002021,1.07e-07,10;UBERON:0000411,1.07e-07,10;UBERON:0001950,1.07e-07,10;UBERON:0010314,1.35e-07,92;UBERON:0000922,1.44e-07,320 | |||
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| ||
|short_description=p1@Rpgrip1l | |short_description=p1@Rpgrip1l | ||
}} | }} |
Latest revision as of 23:39, 25 September 2015
Short description: | p1@Rpgrip1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rpgrip1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:813 |
Association with transcript: | 0bp_to_ENSMUST00000047783_5end |
EntrezGene: | Rpgrip1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.71e-12 | 64 |
neural plate | 1.71e-12 | 64 |
presumptive neural plate | 1.71e-12 | 64 |
ecto-epithelium | 1.12e-11 | 73 |
pre-chordal neural plate | 7.02e-11 | 49 |
ectoderm-derived structure | 7.05e-10 | 95 |
ectoderm | 7.05e-10 | 95 |
presumptive ectoderm | 7.05e-10 | 95 |
regional part of nervous system | 8.03e-10 | 54 |
brain | 2.12e-09 | 47 |
future brain | 2.12e-09 | 47 |
neural tube | 3.06e-09 | 52 |
neural rod | 3.06e-09 | 52 |
future spinal cord | 3.06e-09 | 52 |
neural keel | 3.06e-09 | 52 |
regional part of brain | 5.68e-09 | 46 |
central nervous system | 7.81e-09 | 73 |
anterior neural tube | 1.96e-08 | 40 |
nervous system | 2.42e-08 | 75 |
regional part of forebrain | 6.85e-08 | 39 |
forebrain | 6.85e-08 | 39 |
future forebrain | 6.85e-08 | 39 |
occipital lobe | 1.07e-07 | 10 |
visual cortex | 1.07e-07 | 10 |
neocortex | 1.07e-07 | 10 |
structure with developmental contribution from neural crest | 1.35e-07 | 92 |
embryo | 1.44e-07 | 320 |