FFCP PHASE1:Mm9::chr19:55967614..55967621,+: Difference between revisions
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{{FFCP|EntrezGene=21416|HGNC=|MCL_coexpression_id=141|UniProt=|association_with_transcript=-220bp_to_ENSMUST00000145249_5end|description=CAGE_peak_61_at_Tcf7l2_5end|id=chr19:55967614..55967621,+|ontology_enrichment_celltype=CL:0002613!1.90e-17!3;CL:0002610!3.09e-08!3|ontology_enrichment_celltype_v019_2=CL:0002613,1.58e-86,3;CL:0000117,2.24e-12,23;CL:0000337,2.24e-12,23;CL:0000540,6.05e-09,33;CL:0000047,6.05e-09,33;CL:0000031,6.05e-09,33;CL:0000404,6.05e-09,33;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000369!1.10e-10!5;UBERON:0002435!1.10e-10!5;UBERON:0000204!1.10e-10!5;UBERON:0010082!1.10e-10!5;UBERON:0004684!3.09e-08!3;UBERON:0002275!3.09e-08!3;UBERON:0002420!7.62e-07!8;UBERON:0007245!7.62e-07!8;UBERON:0010009!7.62e-07!8;UBERON:0010011!7.62e-07!8;UBERON:0000454!7.62e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.64e-52,5;UBERON:0002435,1.64e-52,5;UBERON:0000204,1.64e-52,5;UBERON:0010082,1.64e-52,5;UBERON:0002420,2.45e-33,8;UBERON:0007245,2.45e-33,8;UBERON:0010009,2.45e-33,8;UBERON:0010011,2.45e-33,8;UBERON:0000454,2.45e-33,8;UBERON:0003528,4.90e-10,29;UBERON:0002791,4.90e-10,29;UBERON:0001893,4.90e-10,29;UBERON:0002020,1.04e-08,34;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766124028511126,0.46081959976873,2.1101806036831,4.66586982372289,2.08365348222704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p61@Tcf7l2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21416 | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-220bp_to_ENSMUST00000145249_5end | |||
|cluster_id=chr19:55967614..55967621,+ | |||
|description=CAGE_peak_61_at_Tcf7l2_5end | |||
|id=chr19:55967614..55967621,+ | |||
|ontology_enrichment_celltype=CL:0002613!1.90e-17!3;CL:0002610!3.09e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.58e-86,3;CL:0000117,2.24e-12,23;CL:0000337,2.24e-12,23;CL:0000540,6.05e-09,33;CL:0000047,6.05e-09,33;CL:0000031,6.05e-09,33;CL:0000404,6.05e-09,33;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!1.10e-10!5;UBERON:0002435!1.10e-10!5;UBERON:0000204!1.10e-10!5;UBERON:0010082!1.10e-10!5;UBERON:0004684!3.09e-08!3;UBERON:0002275!3.09e-08!3;UBERON:0002420!7.62e-07!8;UBERON:0007245!7.62e-07!8;UBERON:0010009!7.62e-07!8;UBERON:0010011!7.62e-07!8;UBERON:0000454!7.62e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.64e-52,5;UBERON:0002435,1.64e-52,5;UBERON:0000204,1.64e-52,5;UBERON:0010082,1.64e-52,5;UBERON:0002420,2.45e-33,8;UBERON:0007245,2.45e-33,8;UBERON:0010009,2.45e-33,8;UBERON:0010011,2.45e-33,8;UBERON:0000454,2.45e-33,8;UBERON:0003528,4.90e-10,29;UBERON:0002791,4.90e-10,29;UBERON:0001893,4.90e-10,29;UBERON:0002020,1.04e-08,34;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766124028511126,0.46081959976873,2.1101806036831,4.66586982372289,2.08365348222704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p61@Tcf7l2 | |||
}} |
Latest revision as of 23:54, 25 September 2015
Short description: | p61@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_61_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -220bp_to_ENSMUST00000145249_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.58e-86 | 3 |
CNS neuron (sensu Vertebrata) | 2.24e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.24e-12 | 23 |
neuron | 6.05e-09 | 33 |
neuronal stem cell | 6.05e-09 | 33 |
neuroblast | 6.05e-09 | 33 |
electrically signaling cell | 6.05e-09 | 33 |
electrically responsive cell | 1.01e-07 | 39 |
electrically active cell | 1.01e-07 | 39 |
neural cell | 4.30e-07 | 43 |
ectodermal cell | 5.93e-07 | 44 |
neurectodermal cell | 5.93e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.64e-52 | 5 |
striatum | 1.64e-52 | 5 |
ventral part of telencephalon | 1.64e-52 | 5 |
future corpus striatum | 1.64e-52 | 5 |
basal ganglion | 2.45e-33 | 8 |
nuclear complex of neuraxis | 2.45e-33 | 8 |
aggregate regional part of brain | 2.45e-33 | 8 |
collection of basal ganglia | 2.45e-33 | 8 |
cerebral subcortex | 2.45e-33 | 8 |
brain grey matter | 4.90e-10 | 29 |
regional part of telencephalon | 4.90e-10 | 29 |
telencephalon | 4.90e-10 | 29 |
gray matter | 1.04e-08 | 34 |
regional part of forebrain | 1.01e-07 | 39 |
forebrain | 1.01e-07 | 39 |
future forebrain | 1.01e-07 | 39 |
anterior neural tube | 1.49e-07 | 40 |