FFCP PHASE1:Mm9::chr2:156301243..156301297,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13821 | |EntrezGene=13821 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000141109_5end | |association_with_transcript=0bp_to_ENSMUST00000141109_5end | ||
|cluster_id=chr2:156301243..156301297,+ | |||
|description=CAGE_peak_1_at_Epb4.1l1_5end | |description=CAGE_peak_1_at_Epb4.1l1_5end | ||
|id=chr2:156301243..156301297,+ | |id=chr2:156301243..156301297,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.56e-09!50;CL:0000117!8.28e-09!23;CL:0000337!8.28e-09!23;CL:0002319!2.03e-08!43;CL:0000221!2.95e-08!44;CL:0000133!2.95e-08!44;CL:0000393!8.24e-08!39;CL:0000211!8.24e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.45e-09,23;CL:0000337,6.45e-09,23;CL:0002319,2.39e-08,43;CL:0000221,3.46e-08,44;CL:0000133,3.46e-08,44;CL:0000393,9.88e-08,39;CL:0000211,9.88e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.17e-25!102;UBERON:0000924!9.17e-25!102;UBERON:0006601!9.17e-25!102;UBERON:0000073!4.08e-23!75;UBERON:0001016!4.08e-23!75;UBERON:0001017!5.62e-22!73;UBERON:0005743!5.62e-22!73;UBERON:0002346!8.05e-20!71;UBERON:0003075!8.05e-20!71;UBERON:0007284!8.05e-20!71;UBERON:0001049!8.12e-20!52;UBERON:0005068!8.12e-20!52;UBERON:0006241!8.12e-20!52;UBERON:0007135!8.12e-20!52;UBERON:0000955!3.46e-19!50;UBERON:0006238!3.46e-19!50;UBERON:0002616!1.76e-18!49;UBERON:0000033!7.13e-18!63;UBERON:0002020!9.22e-15!34;UBERON:0003080!2.05e-14!40;UBERON:0003056!2.28e-14!49;UBERON:0002780!7.83e-14!39;UBERON:0001890!7.83e-14!39;UBERON:0006240!7.83e-14!39;UBERON:0002791!2.53e-12!29;UBERON:0003528!2.53e-12!29;UBERON:0001893!2.53e-12!29;UBERON:0000956!4.92e-09!21;UBERON:0001869!4.92e-09!21;UBERON:0000203!4.92e-09!21;UBERON:0000153!6.42e-09!94;UBERON:0007811!1.68e-08!86;UBERON:0002619!3.18e-08!17;UBERON:0002021!6.64e-08!10;UBERON:0000411!6.64e-08!10;UBERON:0001950!6.64e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.38e-23,75;UBERON:0004121,1.75e-22,95;UBERON:0000924,1.75e-22,95;UBERON:0006601,1.75e-22,95;UBERON:0001017,4.81e-22,73;UBERON:0000073,2.11e-21,54;UBERON:0001049,4.32e-20,52;UBERON:0005068,4.32e-20,52;UBERON:0006241,4.32e-20,52;UBERON:0007135,4.32e-20,52;UBERON:0002346,6.48e-18,64;UBERON:0003075,6.48e-18,64;UBERON:0007284,6.48e-18,64;UBERON:0000955,1.40e-17,47;UBERON:0006238,1.40e-17,47;UBERON:0010371,4.71e-17,73;UBERON:0002616,7.03e-17,46;UBERON:0010314,3.70e-16,92;UBERON:0002020,5.85e-15,34;UBERON:0003080,1.32e-14,40;UBERON:0003056,1.47e-14,49;UBERON:0002780,5.13e-14,39;UBERON:0001890,5.13e-14,39;UBERON:0006240,5.13e-14,39;UBERON:0003528,1.75e-12,29;UBERON:0002791,1.75e-12,29;UBERON:0001893,1.75e-12,29;UBERON:0000956,3.80e-09,21;UBERON:0001869,3.80e-09,21;UBERON:0000203,3.80e-09,21;UBERON:0002619,2.52e-08,17;UBERON:0002021,5.33e-08,10;UBERON:0000411,5.33e-08,10;UBERON:0001950,5.33e-08,10 | |||
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| ||
|short_description=p1@Epb4.1l1 | |short_description=p1@Epb4.1l1 | ||
}} | }} |
Latest revision as of 23:59, 25 September 2015
Short description: | p1@Epb4.1l1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Epb4.1l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000141109_5end |
EntrezGene: | Epb4.1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.45e-09 | 23 |
neuroblast (sensu Vertebrata) | 6.45e-09 | 23 |
neural cell | 2.39e-08 | 43 |
ectodermal cell | 3.46e-08 | 44 |
neurectodermal cell | 3.46e-08 | 44 |
electrically responsive cell | 9.88e-08 | 39 |
electrically active cell | 9.88e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.38e-23 | 75 |
ectoderm-derived structure | 1.75e-22 | 95 |
ectoderm | 1.75e-22 | 95 |
presumptive ectoderm | 1.75e-22 | 95 |
central nervous system | 4.81e-22 | 73 |
regional part of nervous system | 2.11e-21 | 54 |
neural tube | 4.32e-20 | 52 |
neural rod | 4.32e-20 | 52 |
future spinal cord | 4.32e-20 | 52 |
neural keel | 4.32e-20 | 52 |
neurectoderm | 6.48e-18 | 64 |
neural plate | 6.48e-18 | 64 |
presumptive neural plate | 6.48e-18 | 64 |
brain | 1.40e-17 | 47 |
future brain | 1.40e-17 | 47 |
ecto-epithelium | 4.71e-17 | 73 |
regional part of brain | 7.03e-17 | 46 |
structure with developmental contribution from neural crest | 3.70e-16 | 92 |
gray matter | 5.85e-15 | 34 |
anterior neural tube | 1.32e-14 | 40 |
pre-chordal neural plate | 1.47e-14 | 49 |
regional part of forebrain | 5.13e-14 | 39 |
forebrain | 5.13e-14 | 39 |
future forebrain | 5.13e-14 | 39 |
brain grey matter | 1.75e-12 | 29 |
regional part of telencephalon | 1.75e-12 | 29 |
telencephalon | 1.75e-12 | 29 |
cerebral cortex | 3.80e-09 | 21 |
cerebral hemisphere | 3.80e-09 | 21 |
pallium | 3.80e-09 | 21 |
regional part of cerebral cortex | 2.52e-08 | 17 |
occipital lobe | 5.33e-08 | 10 |
visual cortex | 5.33e-08 | 10 |
neocortex | 5.33e-08 | 10 |