Personal tools

FFCP PHASE1:Mm9::chr3:95799859..95799878,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:95799859..95799878,-
|DHSsupport=NA
|short_description=p1@Plekho1
|DPIdataset=NA
|description=CAGE_peak_1_at_Plekho1_5end
|association_with_transcript=45bp_to_ENSMUST00000015889_5end
|EntrezGene=67220
|EntrezGene=67220
|HGNC=
|HGNC=
|MCL_coexpression_id=2387
|TSSclassifier=NA
|UniProt=Q9JIY0
|UniProt=Q9JIY0
|association_with_transcript=45bp_to_ENSMUST00000015889_5end
|cluster_id=chr3:95799859..95799878,-
|description=CAGE_peak_1_at_Plekho1_5end
|id=chr3:95799859..95799878,-
|ontology_enrichment_celltype=CL:0002319!2.38e-08!43;CL:0000221!3.24e-08!44;CL:0000133!3.24e-08!44
|ontology_enrichment_celltype_v019_2=CL:0002319,2.37e-08,43;CL:0000221,3.22e-08,44;CL:0000133,3.22e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!1.71e-07!18;UBERON:0000948!1.71e-07!18;UBERON:0005498!1.71e-07!18;UBERON:0004140!1.71e-07!18;UBERON:0009881!1.71e-07!18;UBERON:0004141!1.71e-07!18;UBERON:0003084!1.71e-07!18;UBERON:0007005!1.71e-07!18;UBERON:0004139!1.71e-07!18;UBERON:0004291!1.71e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.70e-07,18;UBERON:0000948,1.70e-07,18;UBERON:0005498,1.70e-07,18;UBERON:0004140,1.70e-07,18;UBERON:0009881,1.70e-07,18;UBERON:0004141,1.70e-07,18;UBERON:0003084,1.70e-07,18;UBERON:0007005,1.70e-07,18;UBERON:0004139,1.70e-07,18;UBERON:0004291,1.70e-07,18;UBERON:0010314,9.48e-07,92
|phase1_expression=12.8119077683835,0,1.36499771816861,0,0.500895729946347,0,0,0.645616617207881,1.68946466582,0.468129052643987,0.513653904676515,0.239316476986009,2.73921167889929,0.524522414513984,4.66353666541928,9.11138703254217,9.09430441566591,27.6029394688458,28.1084588891765,29.2828859740641,8.24919914465377,9.23405846168233,14.1047886135025,7.35965144849671,8.02932483735095,0,0,0,0,0.504060259519861,0.886922042621219,1.90509202037889,2.46025915033828,15.8481681015439,0,0,0.204169356262369,0.837063261473815,7.813353445238,4.71171369576418,1.17646297606203,0.683045484958446,0.971020706062307,0.503587271902309,0.405507724878058,3.48738829107195,12.5182615095686,23.9827672018491,17.1355222532888,13.9989527333484,12.0388322597812,15.8127820801469,64.7640859382862,4.35217285206807,17.1407837562657,8.7468208252222,14.0401385569991,9.7977697532714,28.3243045203437,31.2104677770499,29.7900759647904,12.1984031544888,7.11435836888911,110.687665225612,120.641696233171,115.808258736214,70.4060259718251,58.0169641035547,37.328260431052,43.8769299577995,43.1166170770333,11.1403883917483,8.61387309711293,40.05449134329,50.2230268135559,43.203282970671,6.60695285996332,5.10749352340751,4.14737639791857,25.7178261073878,29.6419965271807,21.8783615633839,5.02529398202486,3.37657566019008,4.27835093775068,7.95497180778903,9.681274294339,17.1487490159277,53.1597877198952,67.7121178556798,35.6533321103064,12.9063581547208,1.3599426674155,0,1.29955283489534,1.34408066129201,6.88177658645584,11.0779709675738,19.743736349818,19.0803370235584,10.7040999030277,5.13305909657271,2.54805239706646,0,3.68034769719064,3.54703811665138,2.52762222507392,4.22480354960522,12.6879562987114,6.82833839698194,12.8379141806941,8.8294988710521,8.99400439298628,7.38540938707851,8.11362079236363,4.27266410520897,7.66304399976559,5.06097749219691,15.9229899350977,13.426648545635,10.8212344045593,11.6370060752453,0,13.7606974595427,9.63454851341893,4.59822699375465,15.3363359367578,18.5969846607956,13.8506547509641,5.69204429738326,3.20250421973039,21.1099311549612,9.21268897019065,14.3200656104985,4.36354893575076,5.67844420737152,12.7299204812895,11.5698482667387,3.0326731012041,3.57751155007006,20.4289095451445,16.3230494147766,22.8678904852794,15.6733010549144,16.8730517895293,13.4519406299092,16.4915035225123,2.06962696591213,29.7483830247322,22.6927296201383,21.4660371480018,16.6588756644957,8.61946472599353,12.1888258282758,5.96768195583036,11.1459189418356,15.4486901208912,10.2939162845886,5.68326998791185,27.1334762021507,23.9216581180718,25.0286265430811,26.7521551211288,25.1858216636677,29.1564843357145,26.0438018120457,36.7534559917478,31.9937038086044,20.0763016894446,22.1626076506779,20.9968216723766,24.7077978748812,26.3460138349261,29.256999289761,5.88811855979556,13.5834088340655,0.660837565967596,2.3800550999719,19.8358072997768,12.5407802804637,9.40732467651281,8.47070803418039,6.67134131534611,6.27744566171445,4.74529061544512,8.39964669092456,5.27803938480566,7.16243299348143,5.45899443933536,7.19055526923377,4.10662294761919,5.77509692437665,23.139483916276,11.5390997735826,12.3978509240388,10.997171703647,8.92181440971078,9.18779240563173,7.90456714053216,5.01874503130647,3.92496819603437,5.55287237648102,3.85388415213294,4.17112764290235,5.30709286805648,3.82265591054251,4.66578279193557,6.27060615356284,4.32863948028414,7.48009957372108,7.45822043165163,4.11842119782122,5.75072826109418,11.5363693777236,5.92871578917665,5.30415643688935,3.76734568396016,3.37710464954357,17.5515530658274,18.5701583535075,13.0371981153621,10.5241953180617,10.3263709246941,11.0554129911598,10.7119638398706,17.3668946593441,19.8620281573801,18.3815692408483,17.6994793209811,17.0417847304368,17.6138681503213,22.4206040801343,149.28337109988,105.51770266083,3.44234991113325,2.75936746304733,7.22477654945064,5.39173758324135,5.57378814280696,11.1087207969924,19.8770178232242,23.4263246577983,16.5876016254255,23.6579109973027,23.171062104569,22.0799694015289,17.0020494703456,21.6269334854371,18.1832377855401,19.6006003017302,8.51640511249612,11.3961986347043,9.93610452056814,14.6823409445557,0,6.79785781233948,4.23252979750651,5.28094223316515,8.56375489354241,7.37844355065426,10.0787034335606,5.45300594216258,7.48644494607915,4.74055136903724,3.16255825724996,5.15677716240934,5.10659408630682,20.887086907632,20.9561067728062,16.289614662401,10.995094485821,11.9507107793387,11.3538824215463,10.656273219011,26.9872464273267,17.7938939525609,3.52845436887939,4.78170133530292,6.78150592122803,3.86002719540197,4.29740438411291,2.79039529566604,4.95517422270746,5.19190845629427,7.17657699350981,16.717336305021,9.4449208958553,6.02779062415011,7.24479406921433,8.92234875505438,12.0684685295637,14.5549510416604,12.1615976947893,6.68269432610579,19.770999598821,10.5726122905961,6.04829908602087,6.690825472463,10.9181281873089,9.44050424693745,8.10003866108292,9.16145796944104,5.18459893167171,6.21339313086926,16.3470952218415,8.37292657846281,9.43113395605456,5.05573089694524,9.81614658430756,7.60302564708502,8.21500670520278,4.4269490846943,6.18670132111694,3.62376181239009,8.3528701814781,5.68820017130721,19.6643458831459,15.3039326175593,13.6416864126685,12.1738153053887,12.715606706001,11.2983722548771,11.3720935924424,7.16861794631848,8.76378276532498,8.87270429204197,8.1864619821392,7.02346443974405,5.02570679380746,5.21479882314986,2.88581739386284,0.897138566094757,1.17519231454855,21.2508553435409,28.903101219482,12.0880072016395,5.35920947697665,8.02515366456581,13.5540442228096,11.0478056761722,14.3223878359849,12.5452823110892,15.7568979547248,14.3524840504043,14.8504950050997,13.5096360967266,7.70342095273148,20.7104124700728,28.7490952808169,24.3405172774629,18.4392294214465,10.4535888339366,13.4152424081909,19.1197248788015,17.335244768526,19.5733304376949,15.0832028508153,14.9091354940641,18.2505095920973,13.7697229211836,17.9791694342174,17.6069169113391,14.7609155215926,16.6702791949076,17.2667645657835,17.5547390621972,13.1867488257058,16.1918812147837,17.4863318716562,15.6178709420217,16.2136609164178,14.3892952466005,15.8103759097755,14.4690979494767,17.0123014771678,16.8364615320219,16.1606895476576,16.8342681497322,16.9648075917569,15.9577261448413,24.5538625901814,16.1134314833405,11.1885834369062,14.2392029424629,15.6734177658424,15.6855869455258,22.1894465199858,11.9119366324538,15.3032771509478
|phase1_expression=12.8119077683835,0,1.36499771816861,0,0.500895729946347,0,0,0.645616617207881,1.68946466582,0.468129052643987,0.513653904676515,0.239316476986009,2.73921167889929,0.524522414513984,4.66353666541928,9.11138703254217,9.09430441566591,27.6029394688458,28.1084588891765,29.2828859740641,8.24919914465377,9.23405846168233,14.1047886135025,7.35965144849671,8.02932483735095,0,0,0,0,0.504060259519861,0.886922042621219,1.90509202037889,2.46025915033828,15.8481681015439,0,0,0.204169356262369,0.837063261473815,7.813353445238,4.71171369576418,1.17646297606203,0.683045484958446,0.971020706062307,0.503587271902309,0.405507724878058,3.48738829107195,12.5182615095686,23.9827672018491,17.1355222532888,13.9989527333484,12.0388322597812,15.8127820801469,64.7640859382862,4.35217285206807,17.1407837562657,8.7468208252222,14.0401385569991,9.7977697532714,28.3243045203437,31.2104677770499,29.7900759647904,12.1984031544888,7.11435836888911,110.687665225612,120.641696233171,115.808258736214,70.4060259718251,58.0169641035547,37.328260431052,43.8769299577995,43.1166170770333,11.1403883917483,8.61387309711293,40.05449134329,50.2230268135559,43.203282970671,6.60695285996332,5.10749352340751,4.14737639791857,25.7178261073878,29.6419965271807,21.8783615633839,5.02529398202486,3.37657566019008,4.27835093775068,7.95497180778903,9.681274294339,17.1487490159277,53.1597877198952,67.7121178556798,35.6533321103064,12.9063581547208,1.3599426674155,0,1.29955283489534,1.34408066129201,6.88177658645584,11.0779709675738,19.743736349818,19.0803370235584,10.7040999030277,5.13305909657271,2.54805239706646,0,3.68034769719064,3.54703811665138,2.52762222507392,4.22480354960522,12.6879562987114,6.82833839698194,12.8379141806941,8.8294988710521,8.99400439298628,7.38540938707851,8.11362079236363,4.27266410520897,7.66304399976559,5.06097749219691,15.9229899350977,13.426648545635,10.8212344045593,11.6370060752453,0,13.7606974595427,9.63454851341893,4.59822699375465,15.3363359367578,18.5969846607956,13.8506547509641,5.69204429738326,3.20250421973039,21.1099311549612,9.21268897019065,14.3200656104985,4.36354893575076,5.67844420737152,12.7299204812895,11.5698482667387,3.0326731012041,3.57751155007006,20.4289095451445,16.3230494147766,22.8678904852794,15.6733010549144,16.8730517895293,13.4519406299092,16.4915035225123,2.06962696591213,29.7483830247322,22.6927296201383,21.4660371480018,16.6588756644957,8.61946472599353,12.1888258282758,5.96768195583036,11.1459189418356,15.4486901208912,10.2939162845886,5.68326998791185,27.1334762021507,23.9216581180718,25.0286265430811,26.7521551211288,25.1858216636677,29.1564843357145,26.0438018120457,36.7534559917478,31.9937038086044,20.0763016894446,22.1626076506779,20.9968216723766,24.7077978748812,26.3460138349261,29.256999289761,5.88811855979556,13.5834088340655,0.660837565967596,2.3800550999719,19.8358072997768,12.5407802804637,9.40732467651281,8.47070803418039,6.67134131534611,6.27744566171445,4.74529061544512,8.39964669092456,5.27803938480566,7.16243299348143,5.45899443933536,7.19055526923377,4.10662294761919,5.77509692437665,23.139483916276,11.5390997735826,12.3978509240388,10.997171703647,8.92181440971078,9.18779240563173,7.90456714053216,5.01874503130647,3.92496819603437,5.55287237648102,3.85388415213294,4.17112764290235,5.30709286805648,3.82265591054251,4.66578279193557,6.27060615356284,4.32863948028414,7.48009957372108,7.45822043165163,4.11842119782122,5.75072826109418,11.5363693777236,5.92871578917665,5.30415643688935,3.76734568396016,3.37710464954357,17.5515530658274,18.5701583535075,13.0371981153621,10.5241953180617,10.3263709246941,11.0554129911598,10.7119638398706,17.3668946593441,19.8620281573801,18.3815692408483,17.6994793209811,17.0417847304368,17.6138681503213,22.4206040801343,149.28337109988,105.51770266083,3.44234991113325,2.75936746304733,7.22477654945064,5.39173758324135,5.57378814280696,11.1087207969924,19.8770178232242,23.4263246577983,16.5876016254255,23.6579109973027,23.171062104569,22.0799694015289,17.0020494703456,21.6269334854371,18.1832377855401,19.6006003017302,8.51640511249612,11.3961986347043,9.93610452056814,14.6823409445557,0,6.79785781233948,4.23252979750651,5.28094223316515,8.56375489354241,7.37844355065426,10.0787034335606,5.45300594216258,7.48644494607915,4.74055136903724,3.16255825724996,5.15677716240934,5.10659408630682,20.887086907632,20.9561067728062,16.289614662401,10.995094485821,11.9507107793387,11.3538824215463,10.656273219011,26.9872464273267,17.7938939525609,3.52845436887939,4.78170133530292,6.78150592122803,3.86002719540197,4.29740438411291,2.79039529566604,4.95517422270746,5.19190845629427,7.17657699350981,16.717336305021,9.4449208958553,6.02779062415011,7.24479406921433,8.92234875505438,12.0684685295637,14.5549510416604,12.1615976947893,6.68269432610579,19.770999598821,10.5726122905961,6.04829908602087,6.690825472463,10.9181281873089,9.44050424693745,8.10003866108292,9.16145796944104,5.18459893167171,6.21339313086926,16.3470952218415,8.37292657846281,9.43113395605456,5.05573089694524,9.81614658430756,7.60302564708502,8.21500670520278,4.4269490846943,6.18670132111694,3.62376181239009,8.3528701814781,5.68820017130721,19.6643458831459,15.3039326175593,13.6416864126685,12.1738153053887,12.715606706001,11.2983722548771,11.3720935924424,7.16861794631848,8.76378276532498,8.87270429204197,8.1864619821392,7.02346443974405,5.02570679380746,5.21479882314986,2.88581739386284,0.897138566094757,1.17519231454855,21.2508553435409,28.903101219482,12.0880072016395,5.35920947697665,8.02515366456581,13.5540442228096,11.0478056761722,14.3223878359849,12.5452823110892,15.7568979547248,14.3524840504043,14.8504950050997,13.5096360967266,7.70342095273148,20.7104124700728,28.7490952808169,24.3405172774629,18.4392294214465,10.4535888339366,13.4152424081909,19.1197248788015,17.335244768526,19.5733304376949,15.0832028508153,14.9091354940641,18.2505095920973,13.7697229211836,17.9791694342174,17.6069169113391,14.7609155215926,16.6702791949076,17.2667645657835,17.5547390621972,13.1867488257058,16.1918812147837,17.4863318716562,15.6178709420217,16.2136609164178,14.3892952466005,15.8103759097755,14.4690979494767,17.0123014771678,16.8364615320219,16.1606895476576,16.8342681497322,16.9648075917569,15.9577261448413,24.5538625901814,16.1134314833405,11.1885834369062,14.2392029424629,15.6734177658424,15.6855869455258,22.1894465199858,11.9119366324538,15.3032771509478
|short_description=p1@Plekho1
}}
}}

Latest revision as of 00:06, 26 September 2015

Short description:p1@Plekho1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Plekho1_5end
Coexpression cluster:MCL_coexpression_mm9:2387
Association with transcript: 45bp_to_ENSMUST00000015889_5end
EntrezGene:Plekho1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Plekho1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.11
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A227.60
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A629.28
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.03
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C223.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.14
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A264.76
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.14
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.04
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C328.32
Mouse Granule cells, donor2.CNhs12357.11731-123E331.21
Mouse Granule cells, donor3.CNhs12108.11636-122C729.79
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.20
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7110.69
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7120.64
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2115.81
Mouse Microglia, donor1.CNhs12629.11718-123C870.41
Mouse Microglia, donor2.CNhs12634.11736-123E858.02
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D537.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F543.88
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D943.12
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D240.05
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F250.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D643.20
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.72
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.88
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E117.15
Mouse Schwann, donor1.CNhs12507.11728-123D953.16
Mouse Schwann, donor2.CNhs12573.11746-123F967.71
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G335.65
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E319.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.08
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.22
accessory axillary lymph node, adult.CNhs10475.1063-29H912.69
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C512.84
adrenal gland, embryo E16.CNhs11004.1254-43D68.83
adrenal gland, embryo E17.CNhs11043.1263-45I18.99
adrenal gland, embryo E18.CNhs11026.1262-18F57.39
adrenal gland, neonate N00.CNhs11191.1311-23C18.11
adrenal gland, neonate N25.CNhs11223.1377-27I34.27
amnion, adult pregnant day17.5.CNhs10488.583-22A87.66
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F513.43
bone (os femoris), neonate N16.CNhs11225.1525-43A610.82
bone (os femoris), neonate N20.CNhs11195.1350-25C311.64
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.76
cerebellum, neonate N30.CNhs11135.1395-42I29.63
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D118.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.85
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F121.11
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F214.32
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.57
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C620.43
eyeball, embryo E14.CNhs10521.399-16E216.32
eyeball, embryo E15.CNhs10593.426-16C922.87
eyeball, embryo E17.CNhs11023.1261-18D415.67
eyeball, neonate N00.CNhs11207.633-15C616.87
eyeball, neonate N01.CNhs11140.1532-43E713.45
eyeball, neonate N02.CNhs11205.1551-44G816.49
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E229.75
forelimb, embryo E12.CNhs10600.359-14H222.69
forelimb, embryo E13.CNhs10589.384-1E221.47
forelimb, embryo E14.CNhs10577.413-26A816.66
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I611.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C815.45
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.68
heart, embryo E11.CNhs10586.331-24E927.13
heart, embryo E12.CNhs11015.353-12F523.92
heart, embryo E13.CNhs11013.376-3I925.03
heart, embryo E14.CNhs10597.403-26D426.75
heart, embryo E15.CNhs11017.431-16C825.19
heart, embryo E16.CNhs11021.457-17C629.16
heart, embryo E17.CNhs11025.479-18E526.04
heart, embryo E18.CNhs11030.1283-20G336.75
heart, neonate N00.CNhs11213.639-21E331.99
heart, neonate N03.CNhs11221.1349-25I220.08
heart, neonate N10.CNhs11118.749-24G122.16
heart, neonate N16.CNhs11209.782-15G121.00
heart, neonate N20.CNhs11127.821-26I624.71
heart, neonate N25.CNhs11196.1351-25D326.35
heart, neonate N30.CNhs11202.1390-42D229.26
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G113.58
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I519.84
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D89.41
intestine, embryo E16.CNhs10585.463-22H48.47
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F76.28
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E98.40
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G15.78
kidney, embryo E14.CNhs10606.411-4I923.14
kidney, embryo E15.CNhs10997.434-16F811.54
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I211.00
kidney, embryo E18.CNhs11001.1288-20C78.92
kidney, neonate N00.CNhs11214.646-21G79.19
kidney, neonate N10.CNhs11206.758-6D57.90
kidney, neonate N20.CNhs11113.832-19I15.02
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H15.55
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F84.17
liver, embryo E13.CNhs10524.378-3H65.31
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F56.27
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F47.46
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B117.55
lung, embryo E12.CNhs10522.354-16G218.57
lung, embryo E14.CNhs10604.404-26F813.04
lung, embryo E15.CNhs11020.432-17C510.52
lung, embryo E16.CNhs10998.458-17B610.33
lung, embryo E17.CNhs10605.480-44A611.06
lung, embryo E18.CNhs10583.1287-20I610.71
lung, neonate N00.CNhs11224.640-42C617.37
lung, neonate N06.CNhs11212.683-20E519.86
lung, neonate N07.CNhs11111.715-19A318.38
lung, neonate N10.CNhs11219.750-23E617.70
lung, neonate N20.CNhs11109.822-18A417.04
lung, neonate N25.CNhs11119.1359-25C717.61
lung, neonate N30.CNhs11133.1394-42H222.42
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1149.28
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1105.52
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.57
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.11
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E223.43
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.66
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.17
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.18
olfactory brain, adult.CNhs10489.18-22I919.60
ovary, adult.CNhs10507.91-2I78.52
ovary, embryo E18.CNhs11040.505-44H711.40
ovary, neonate N00.CNhs11217.1299-22I49.94
oviduct, adult pregnant day01.CNhs10500.988-6G614.68
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F46.80
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G38.56
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G910.08
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E620.89
pituitary gland, embryo E13.CNhs11009.370-44C720.96
pituitary gland, embryo E14.CNhs11037.398-44A516.29
pituitary gland, embryo E15.CNhs10592.427-16B911.00
pituitary gland, embryo E16.CNhs11036.449-43F611.95
pituitary gland, embryo E17.CNhs11039.1265-44F511.35
pituitary gland, neonate N00.CNhs11190.1308-22E910.66
placenta, adult pregnant day10.CNhs10472.539-13I726.99
placenta, adult pregnant day17.CNhs10464.577-18G317.79
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G46.78
skin, neonate N03.CNhs11215.662-22H33.86
skin, neonate N06.CNhs11097.693-20I54.30
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G27.18
spleen, embryo E16.CNhs11035.461-43C116.72
spleen, embryo E18.CNhs11011.1271-21F29.44
spleen, neonate N10.CNhs11116.752-24D16.03
spleen, neonate N20.CNhs11112.824-19H17.24
spleen, neonate N25.CNhs11099.1354-25G38.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.16
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E319.77
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D46.05
stomach, embryo E17.CNhs11006.1035-18D56.69
stomach, embryo E18.CNhs10999.1286-20C610.92
stomach, neonate N03.CNhs11193.1340-24B89.44
stomach, neonate N07.CNhs11210.718-18A98.10
stomach, neonate N25.CNhs11104.1355-25E49.16
stomach, neonate N30.CNhs11134.1386-42I15.18
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G516.35
testis, embryo E13.CNhs11031.389-23F58.37
testis, embryo E15.CNhs11034.443-27C59.43
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I59.82
testis, embryo E18.CNhs11027.503-18G57.60
testis, neonate N00.CNhs11189.1300-22B78.22
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D96.19
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E28.35
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I419.66
thymus, embryo E15.CNhs11005.430-45I215.30
thymus, embryo E16.CNhs11002.456-26C513.64
thymus, embryo E17.CNhs10581.478-18C112.17
thymus, embryo E18.CNhs10595.1273-19G412.72
thymus, neonate N02.CNhs11181.1541-43F811.30
thymus, neonate N03.CNhs11137.2104-43C711.37
thymus, neonate N06.CNhs11197.681-26C47.17
thymus, neonate N07.CNhs11211.713-19D38.76
thymus, neonate N10.CNhs11194.748-24E48.87
thymus, neonate N20.CNhs11186.820-7A28.19
thymus, neonate N25.CNhs11125.1362-25G77.02
thymus, neonate N30.CNhs11132.1393-42G25.03
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E421.25
uterus, adult pregnant day19.CNhs10497.590-15F528.90
uterus, adult.CNhs10509.92-27E512.09
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.51
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.71
whole body, embryo E11.CNhs11014.324-5I828.75
whole body, embryo E12.CNhs10587.857-27C924.34
whole body, embryo E13.CNhs10512.372-23H218.44
whole body, embryo E14.5.CNhs10578.420-27D210.45
whole body, embryo E14.CNhs10519.395-14B113.42
whole body, embryo E16.CNhs10514.453-14F219.12
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.98
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.55
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.62
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.21
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.39
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.81
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.96
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.11
whole body, embryo E17.5.CNhs10513.490-9F911.19
whole body, embryo E17.CNhs10517.475-3I514.24
whole body, embryo E18.CNhs10516.493-3B315.67
whole body, neonate N00.CNhs10525.657-19C215.69
whole body, neonate N01.CNhs10576.659-23C622.19
whole body, neonate N06.CNhs10515.692-21D111.91
whole body, neonate N10.CNhs10518.761-6B415.30





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell2.37e-0843
ectodermal cell3.22e-0844
neurectodermal cell3.22e-0844
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:95799859..95799878,-&oldid=4222150"