FFCP PHASE1:Mm9::chr17:25182306..25182315,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=106633|HGNC=|MCL_coexpression_id=18|UniProt=Q3TA81|association_with_transcript=-134bp_to_uc008azo.2_5end|description=CAGE_peak_5_at_Ift140_5end|id=chr17:25182306..25182315,+|ontology_enrichment_celltype=CL:0000553!1.79e-08!6;CL:0000556!1.79e-08!6|ontology_enrichment_celltype_v019_2=CL:0000945,4.83e-16,1;CL:0000236,4.83e-16,1;CL:0000826,4.83e-16,1;CL:0000553,7.63e-11,6;CL:0000556,7.63e-11,6;CL:0000050,1.51e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!3.29e-08!6;UBERON:0004457!3.29e-08!6;UBERON:0000042!3.29e-08!6;UBERON:0004854!3.29e-08!6;UBERON:0009034!3.29e-08!6;UBERON:0002095!3.29e-08!6;UBERON:0004782!3.29e-08!6;UBERON:0003281!3.29e-08!6;UBERON:0009664!3.29e-08!6;UBERON:0002296!3.29e-08!6;UBERON:0005602!3.29e-08!6;UBERON:0001179!3.29e-08!6;UBERON:0006293!3.29e-08!6;UBERON:0003887!4.50e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000029,9.51e-16,1;UBERON:0001097,9.51e-16,1;UBERON:0003968,9.51e-16,1;UBERON:0001467,9.51e-16,1|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.404950534779652,0,2.36596624018678,3.83920414096069,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,3.18786951509699,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0.376736914009382,0.410082683163076,1.14389086603261,1.35982743995084,0.979660166265606,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p5@Ift140}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=106633 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TA81 | |||
|association_with_transcript=-134bp_to_uc008azo.2_5end | |||
|cluster_id=chr17:25182306..25182315,+ | |||
|description=CAGE_peak_5_at_Ift140_5end | |||
|id=chr17:25182306..25182315,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.79e-08!6;CL:0000556!1.79e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.83e-16,1;CL:0000236,4.83e-16,1;CL:0000826,4.83e-16,1;CL:0000553,7.63e-11,6;CL:0000556,7.63e-11,6;CL:0000050,1.51e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!3.29e-08!6;UBERON:0004457!3.29e-08!6;UBERON:0000042!3.29e-08!6;UBERON:0004854!3.29e-08!6;UBERON:0009034!3.29e-08!6;UBERON:0002095!3.29e-08!6;UBERON:0004782!3.29e-08!6;UBERON:0003281!3.29e-08!6;UBERON:0009664!3.29e-08!6;UBERON:0002296!3.29e-08!6;UBERON:0005602!3.29e-08!6;UBERON:0001179!3.29e-08!6;UBERON:0006293!3.29e-08!6;UBERON:0003887!4.50e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,9.51e-16,1;UBERON:0001097,9.51e-16,1;UBERON:0003968,9.51e-16,1;UBERON:0001467,9.51e-16,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.404950534779652,0,2.36596624018678,3.83920414096069,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,3.18786951509699,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0.376736914009382,0.410082683163076,1.14389086603261,1.35982743995084,0.979660166265606,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p5@Ift140 | |||
}} |
Latest revision as of 02:08, 26 September 2015
Short description: | p5@Ift140 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ift140_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -134bp_to_uc008azo.2_5end |
EntrezGene: | Ift140 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.83e-16 | 1 |
B cell | 4.83e-16 | 1 |
pro-B cell | 4.83e-16 | 1 |
megakaryocyte progenitor cell | 7.63e-11 | 6 |
megakaryocyte | 7.63e-11 | 6 |
megakaryocyte-erythroid progenitor cell | 1.51e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lymph node | 9.51e-16 | 1 |
axillary lymph node | 9.51e-16 | 1 |
peripheral lymph node | 9.51e-16 | 1 |
shoulder | 9.51e-16 | 1 |