FFCP PHASE1:Mm9::chr10:62849298..62849324,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=30045 | |EntrezGene=30045 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9R022,Q9CWA0 | |UniProt=Q9R022,Q9CWA0 | ||
|association_with_transcript=0bp_to_ENSMUST00000043317,ENSMUST00000136832,NM_013888,uc007fkg.2_5end | |association_with_transcript=0bp_to_ENSMUST00000043317,ENSMUST00000136832,NM_013888,uc007fkg.2_5end | ||
|cluster_id=chr10:62849298..62849324,+ | |||
|description=CAGE_peak_3_at_Dnajc12_5end | |description=CAGE_peak_3_at_Dnajc12_5end | ||
|id=chr10:62849298..62849324,+ | |id=chr10:62849298..62849324,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.05e-13!200;UBERON:0000033!3.13e-12!63;UBERON:0004111!1.71e-11!122;UBERON:0002346!2.30e-11!71;UBERON:0003075!2.30e-11!71;UBERON:0007284!2.30e-11!71;UBERON:0004121!1.37e-10!102;UBERON:0000924!1.37e-10!102;UBERON:0006601!1.37e-10!102;UBERON:0000025!2.93e-10!114;UBERON:0001049!1.04e-09!52;UBERON:0005068!1.04e-09!52;UBERON:0006241!1.04e-09!52;UBERON:0007135!1.04e-09!52;UBERON:0000955!3.50e-09!50;UBERON:0006238!3.50e-09!50;UBERON:0003056!5.42e-09!49;UBERON:0002616!6.26e-09!49;UBERON:0001017!1.76e-08!73;UBERON:0005743!1.76e-08!73;UBERON:0000073!6.18e-08!75;UBERON:0001016!6.18e-08!75;UBERON:0003080!5.40e-07!40 | |ontology_enrichment_uberon=UBERON:0000475!4.05e-13!200;UBERON:0000033!3.13e-12!63;UBERON:0004111!1.71e-11!122;UBERON:0002346!2.30e-11!71;UBERON:0003075!2.30e-11!71;UBERON:0007284!2.30e-11!71;UBERON:0004121!1.37e-10!102;UBERON:0000924!1.37e-10!102;UBERON:0006601!1.37e-10!102;UBERON:0000025!2.93e-10!114;UBERON:0001049!1.04e-09!52;UBERON:0005068!1.04e-09!52;UBERON:0006241!1.04e-09!52;UBERON:0007135!1.04e-09!52;UBERON:0000955!3.50e-09!50;UBERON:0006238!3.50e-09!50;UBERON:0003056!5.42e-09!49;UBERON:0002616!6.26e-09!49;UBERON:0001017!1.76e-08!73;UBERON:0005743!1.76e-08!73;UBERON:0000073!6.18e-08!75;UBERON:0001016!6.18e-08!75;UBERON:0003080!5.40e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.53e-13,54;UBERON:0002346,1.96e-13,64;UBERON:0003075,1.96e-13,64;UBERON:0007284,1.96e-13,64;UBERON:0010371,3.37e-13,73;UBERON:0001049,3.03e-12,52;UBERON:0005068,3.03e-12,52;UBERON:0006241,3.03e-12,52;UBERON:0007135,3.03e-12,52;UBERON:0004121,3.46e-12,95;UBERON:0000924,3.46e-12,95;UBERON:0006601,3.46e-12,95;UBERON:0010314,3.88e-11,92;UBERON:0001017,6.29e-11,73;UBERON:0004111,9.78e-11,122;UBERON:0001016,3.12e-10,75;UBERON:0003056,4.21e-10,49;UBERON:0000955,1.14e-09,47;UBERON:0006238,1.14e-09,47;UBERON:0000025,1.68e-09,114;UBERON:0002616,2.41e-09,46;UBERON:0002020,6.88e-08,34;UBERON:0003080,1.01e-07,40;UBERON:0002780,4.03e-07,39;UBERON:0001890,4.03e-07,39;UBERON:0006240,4.03e-07,39 | |||
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| ||
|short_description=p3@Dnajc12 | |short_description=p3@Dnajc12 | ||
}} | }} |
Latest revision as of 04:54, 26 September 2015
Short description: | p3@Dnajc12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dnajc12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000043317, ENSMUST00000136832, NM_013888, uc007fkg.2_5end |
EntrezGene: | Dnajc12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.53e-13 | 54 |
neurectoderm | 1.96e-13 | 64 |
neural plate | 1.96e-13 | 64 |
presumptive neural plate | 1.96e-13 | 64 |
ecto-epithelium | 3.37e-13 | 73 |
neural tube | 3.03e-12 | 52 |
neural rod | 3.03e-12 | 52 |
future spinal cord | 3.03e-12 | 52 |
neural keel | 3.03e-12 | 52 |
ectoderm-derived structure | 3.46e-12 | 95 |
ectoderm | 3.46e-12 | 95 |
presumptive ectoderm | 3.46e-12 | 95 |
structure with developmental contribution from neural crest | 3.88e-11 | 92 |
central nervous system | 6.29e-11 | 73 |
anatomical conduit | 9.78e-11 | 122 |
nervous system | 3.12e-10 | 75 |
pre-chordal neural plate | 4.21e-10 | 49 |
brain | 1.14e-09 | 47 |
future brain | 1.14e-09 | 47 |
tube | 1.68e-09 | 114 |
regional part of brain | 2.41e-09 | 46 |
gray matter | 6.88e-08 | 34 |
anterior neural tube | 1.01e-07 | 40 |
regional part of forebrain | 4.03e-07 | 39 |
forebrain | 4.03e-07 | 39 |
future forebrain | 4.03e-07 | 39 |