FFCP PHASE1:Mm9::chr17:29627791..29627807,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18712 | |EntrezGene=18712 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=F6XDQ5 | |UniProt=F6XDQ5 | ||
|association_with_transcript=34bp_to_ENSMUST00000024811_5end | |association_with_transcript=34bp_to_ENSMUST00000024811_5end | ||
|cluster_id=chr17:29627791..29627807,+ | |||
|description=CAGE_peak_2_at_Pim1_5end | |description=CAGE_peak_2_at_Pim1_5end | ||
|id=chr17:29627791..29627807,+ | |id=chr17:29627791..29627807,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.91e-10!32;CL:0002032!1.91e-10!32;CL:0000037!1.91e-10!32;CL:0000566!1.91e-10!32;CL:0000837!1.91e-10!32;CL:0000063!5.12e-09!66;CL:0000838!1.07e-08!12;CL:0002320!2.27e-08!46;CL:0000134!2.27e-08!46;CL:0000084!4.21e-08!11;CL:0000827!4.21e-08!11;CL:0000542!6.81e-08!13;CL:0000051!6.81e-08!13;CL:0002031!1.30e-07!25;CL:0000738!2.45e-07!17;CL:0002087!2.45e-07!17;CL:0000791!7.67e-07!9;CL:0000789!7.67e-07!9;CL:0002420!7.67e-07!9;CL:0002419!7.67e-07!9;CL:0000790!7.67e-07!9 | |ontology_enrichment_celltype=CL:0000988!1.91e-10!32;CL:0002032!1.91e-10!32;CL:0000037!1.91e-10!32;CL:0000566!1.91e-10!32;CL:0000837!1.91e-10!32;CL:0000063!5.12e-09!66;CL:0000838!1.07e-08!12;CL:0002320!2.27e-08!46;CL:0000134!2.27e-08!46;CL:0000084!4.21e-08!11;CL:0000827!4.21e-08!11;CL:0000542!6.81e-08!13;CL:0000051!6.81e-08!13;CL:0002031!1.30e-07!25;CL:0000738!2.45e-07!17;CL:0002087!2.45e-07!17;CL:0000791!7.67e-07!9;CL:0000789!7.67e-07!9;CL:0002420!7.67e-07!9;CL:0002419!7.67e-07!9;CL:0000790!7.67e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.25e-10,32;CL:0002032,1.25e-10,32;CL:0000037,1.25e-10,32;CL:0000837,1.25e-10,32;CL:0000838,9.68e-09,12;CL:0002320,2.49e-08,46;CL:0000134,2.49e-08,46;CL:0000084,3.85e-08,11;CL:0000827,3.85e-08,11;CL:0000542,6.25e-08,13;CL:0000051,6.25e-08,13;CL:0002031,9.00e-08,25;CL:0000738,2.26e-07,17;CL:0002087,2.26e-07,17;CL:0000791,7.13e-07,9;CL:0000789,7.13e-07,9;CL:0002420,7.13e-07,9;CL:0002419,7.13e-07,9;CL:0000790,7.13e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.19e-14!70;UBERON:0002193!1.17e-10!48;UBERON:0002390!5.47e-10!45;UBERON:0003061!5.47e-10!45;UBERON:0003081!7.45e-10!88;UBERON:0005057!3.19e-09!51;UBERON:0000490!2.02e-08!66;UBERON:0002384!2.27e-08!46;UBERON:0003929!3.86e-08!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.99e-11,48;UBERON:0002405,7.99e-11,48;UBERON:0002390,3.78e-10,45;UBERON:0003061,3.78e-10,45;UBERON:0003081,7.40e-10,87;UBERON:0000926,1.48e-08,120;UBERON:0004120,1.48e-08,120;UBERON:0006603,1.48e-08,120;UBERON:0000490,1.64e-08,66;UBERON:0002384,2.49e-08,46;UBERON:0003929,3.08e-08,55;UBERON:0004119,6.88e-08,118;UBERON:0000925,6.88e-08,118;UBERON:0006595,6.88e-08,118;UBERON:0001007,3.15e-07,116;UBERON:0001555,3.15e-07,116;UBERON:0007026,3.15e-07,116;UBERON:0004921,9.29e-07,114 | |||
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| ||
|short_description=p2@Pim1 | |short_description=p2@Pim1 | ||
}} | }} |
Latest revision as of 05:11, 26 September 2015
Short description: | p2@Pim1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pim1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 34bp_to_ENSMUST00000024811_5end |
EntrezGene: | Pim1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.25e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.25e-10 | 32 |
hematopoietic stem cell | 1.25e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.25e-10 | 32 |
lymphoid lineage restricted progenitor cell | 9.68e-09 | 12 |
connective tissue cell | 2.49e-08 | 46 |
mesenchymal cell | 2.49e-08 | 46 |
T cell | 3.85e-08 | 11 |
pro-T cell | 3.85e-08 | 11 |
lymphocyte | 6.25e-08 | 13 |
common lymphoid progenitor | 6.25e-08 | 13 |
hematopoietic lineage restricted progenitor cell | 9.00e-08 | 25 |
leukocyte | 2.26e-07 | 17 |
nongranular leukocyte | 2.26e-07 | 17 |
mature alpha-beta T cell | 7.13e-07 | 9 |
alpha-beta T cell | 7.13e-07 | 9 |
immature T cell | 7.13e-07 | 9 |
mature T cell | 7.13e-07 | 9 |
immature alpha-beta T cell | 7.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.99e-11 | 48 |
immune system | 7.99e-11 | 48 |
hematopoietic system | 3.78e-10 | 45 |
blood island | 3.78e-10 | 45 |
lateral plate mesoderm | 7.40e-10 | 87 |
mesoderm | 1.48e-08 | 120 |
mesoderm-derived structure | 1.48e-08 | 120 |
presumptive mesoderm | 1.48e-08 | 120 |
unilaminar epithelium | 1.64e-08 | 66 |
connective tissue | 2.49e-08 | 46 |
gut epithelium | 3.08e-08 | 55 |
endoderm-derived structure | 6.88e-08 | 118 |
endoderm | 6.88e-08 | 118 |
presumptive endoderm | 6.88e-08 | 118 |
digestive system | 3.15e-07 | 116 |
digestive tract | 3.15e-07 | 116 |
primitive gut | 3.15e-07 | 116 |
subdivision of digestive tract | 9.29e-07 | 114 |