FFCP PHASE1:Mm9::chr17:33084295..33084313,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170716 | |EntrezGene=170716 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=166 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q4L9,D6RH52,Q99N19,B8JK07 | |UniProt=E9Q4L9,D6RH52,Q99N19,B8JK07 | ||
|association_with_transcript=0bp_to_ENSMUST00000137222,ENSMUST00000145683,NM_130882,uc008bxt.1,uc012apd.1_5end | |association_with_transcript=0bp_to_ENSMUST00000137222,ENSMUST00000145683,NM_130882,uc008bxt.1,uc012apd.1_5end | ||
|cluster_id=chr17:33084295..33084313,- | |||
|description=CAGE_peak_2_at_Cyp4f13_5end | |description=CAGE_peak_2_at_Cyp4f13_5end | ||
|id=chr17:33084295..33084313,- | |id=chr17:33084295..33084313,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.13e-14!130;UBERON:0000925!7.13e-14!130;UBERON:0006595!7.13e-14!130;UBERON:0001007!3.29e-13!128;UBERON:0001555!3.29e-13!128;UBERON:0007026!3.29e-13!128;UBERON:0004921!2.71e-12!126;UBERON:0004185!2.71e-12!126;UBERON:0000160!1.37e-07!43;UBERON:0003929!1.51e-07!55;UBERON:0000490!1.98e-07!66;UBERON:0002405!4.73e-07!70;UBERON:0005911!5.64e-07!69 | |ontology_enrichment_uberon=UBERON:0004119!7.13e-14!130;UBERON:0000925!7.13e-14!130;UBERON:0006595!7.13e-14!130;UBERON:0001007!3.29e-13!128;UBERON:0001555!3.29e-13!128;UBERON:0007026!3.29e-13!128;UBERON:0004921!2.71e-12!126;UBERON:0004185!2.71e-12!126;UBERON:0000160!1.37e-07!43;UBERON:0003929!1.51e-07!55;UBERON:0000490!1.98e-07!66;UBERON:0002405!4.73e-07!70;UBERON:0005911!5.64e-07!69 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.90e-15,118;UBERON:0000925,1.90e-15,118;UBERON:0006595,1.90e-15,118;UBERON:0001007,9.49e-15,116;UBERON:0001555,9.49e-15,116;UBERON:0007026,9.49e-15,116;UBERON:0004921,9.00e-14,114;UBERON:0000160,1.24e-10,31;UBERON:0005409,4.85e-08,47;UBERON:0003929,8.28e-08,55;UBERON:0000490,1.42e-07,66;UBERON:0005911,4.10e-07,69;UBERON:0002530,6.51e-07,65 | |||
|phase1_expression=0.960893082628764,18.1467211972468,15.0149748998547,39.6228116811947,40.0716583957078,5.70789524500425,7.70921713965235,7.48915275961142,2.111830832275,3.04283884218592,3.08192342805909,1.7549874978974,11.2992481754596,8.91688104673774,1.99865857089398,2.83465374345756,1.39912375625629,7.41336088591859,6.7186072466812,5.94145512517242,3.14660173558958,2.58156473122302,3.13439746966722,12.9593862462659,15.3704218315004,10.3361753540704,13.3536218809313,12.2818602630957,44.8455269917042,29.235495052152,14.4124831925948,0.635030673459631,0.61506478758457,0,2.88851619751275,1.49611180822643,1.42918549383658,21.7636447983192,11.720030167857,12.0410461113974,14.7057872007754,11.6117732442936,7.76816564849846,2.39203954153597,2.02753862439029,3.85448179539531,1.56478268869608,1.09012578190223,2.41654801007919,0.58328969722285,1.39986421625363,0,6.20795642413625,5.80289713609076,11.0910953717013,2.05807548828758,1.71920063963254,1.03134418455488,0.606949382578793,0.528990979272033,0.633831403506179,1.35537812827653,0.889294796111139,6.29929802096979,3.9554654502679,4.9733608046227,0.599200221036809,2.30530983192933,0.207379224616955,0.135005938331691,0.210324961351382,1.14260393761521,0.662605622854841,0.61245399607477,0.383381884072945,0,1.10115880999389,0.255374676170375,1.0752457327937,0.263772575460388,0.182975287204819,0.52091337055676,0.558365998002762,1.12552522006336,0.61119299110724,0.589257170947335,0.284743361598206,0.745597783301202,1.36307147999731,1.20914496170857,6.95674772884027,24.9522924324602,8.15965600449301,18.8896117073236,37.6870322119648,38.0822854032735,11.6568868709354,0.852151612890289,0.779358013808606,0.35333957451034,1.40843419776681,2.56652954828636,0,0,2.16491041011214,2.78695852022608,2.02209778005913,14.9580882431969,12.1700805314171,4.60170631100957,1.04091196059682,1.82679286987285,3.68984795609694,4.82312449768392,5.76184664964954,3.26733137457156,10.1349936771093,3.90418263683761,2.65383165584962,1.45590164952668,1.98757366614354,2.42437626567611,11.1835056730873,1.75668478206928,1.04723353406728,22.9911349687732,1.43778149407104,1.19980546198682,0.381210681219194,1.79748767285787,2.74500361691176,1.13088916901578,2.60736480288415,2.04572365864264,2.0778804455956,1.62241263067758,2.24046600470696,2.98576729464223,4.29628689337247,2.52530227063769,0.780722657776222,0.459804208866946,0.540186389416048,1.20563854268572,2.38127747029647,1.40925092313335,1.40552586839593,2.58703370739016,0.431135985865684,0.756424320671277,1.05570674498369,0.43839146485515,1.66828349535359,2.43776516565517,1.4404749548556,2.58744546864041,0.702213187313235,1.28673953557358,1.98914449576915,1.24275463521301,1.64168241986767,1.08037236876609,0.473489471170421,0.787056926989615,1.69693824176116,1.62773761325285,0.804820204198858,1.40118410840603,0.987359099480883,1.80584210487005,1.54030738137126,1.75439984910399,1.3173006917463,2.95254121272818,1.05144974282064,1.13195073617213,38.6589976091044,17.982638533121,1.2797295032114,1.62565670302307,1.28867461322093,3.42861991859682,4.89231696458715,10.2721838100782,18.0321043386914,18.4462829290892,6.03204501120647,6.36660710531683,8.38345574612217,34.1551375288604,24.6397376857151,22.1046813312348,0.379335801906163,1.37098215131675,1.1270773567308,0.814605311381257,0.969762435838129,1.68325967736765,2.08680572510049,2.50937251565324,3.29697328466887,4.44229790118482,36.1672205046322,0.500535317148282,0.393117990226406,0.674586337154561,1.62288097110802,1.68824011826692,4.07401362850272,12.9463261852865,12.4844124616777,11.8061407670875,8.62609239164127,10.0478055870496,9.04909252032226,14.6495749209325,16.5045620440159,20.7450714186248,3.69506380333209,0.568474235311454,0.814824882210129,1.18821560042632,1.40814148973101,2.34508760418542,2.61848004974615,4.09780660501378,1.57635144106191,2.43611158613652,2.55127629851979,5.24362607090362,3.9717545829156,6.07526046042349,7.53956419696361,3.26343410291226,3.93411418415229,4.41498794087572,1.28440471990234,3.04750385139728,0.491804836130026,1.51482556322624,0,0,0,0.716906393857656,2.00518806674155,2.54768877709949,1.21443210502468,0.876767573733936,1.18586333383957,1.92792789853084,4.11626247103979,1.95872164033981,3.09485222771795,4.45419332025846,3.98235415019888,1.45668381692989,1.51161778482376,0.565815239267694,1.77181135728464,1.22974059177571,5.16856586336442,0.727067458955011,1.42598951353889,3.47640433729398,3.16255825724996,2.06271086496374,3.40439605753788,0.540183282093931,1.68166288917581,1.92903331528433,3.54680467284547,3.38900753443934,2.63278432963394,5.78483403317739,3.98941903708308,8.89694697628045,2.42581237860458,2.4732937941222,3.55221738730992,1.5078231232039,1.3130957840345,0.984845398470368,19.2377352175701,2.41052892613663,3.2465467351592,1.23832120777933,3.70389054739423,1.69531611304222,2.46049609897845,2.51655990527175,3.0596117398894,2.79902904647316,4.00779924032829,3.81868247206045,1.10717597753397,1.21991680276109,1.18805874903981,1.46361807210128,2.18362563746178,2.15782954215713,2.64491058321075,1.83229159388821,19.9607058869361,6.21339313086926,0,2.0932316446157,0.827292452285488,1.75006069509643,1.80823752868824,2.36538575687089,3.0512882047896,2.8644964665669,2.30690557736564,1.44950472495604,0.864090018773596,4.74016680942267,1.62180172232131,1.84879722896689,1.68897069871134,1.61124026100733,1.78813219303138,3.24527713703916,2.80610101631697,3.02899349844443,4.34378797933499,4.33552596088414,5.06780979846713,6.44619338990207,9.46702907670709,2.94749498699775,2.21985953374065,1.34570784914214,1.84673078000486,2.70465431645067,2.064507229963,3.6630324853453,2.57242054894879,1.50471631210609,1.6942555278512,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,1.19707462020309,1.53660245178721,1.70174701947806,0.419226325255965,0,4.00044110042907,1.85431551515005,3.20919209591815,2.52697211763797,2.28131369901216,3.01802146217722,2.24739617927718,1.98477972455095,2.98664438569189,0.476293691283074,1.73826488917283,1.54327376370964,1.23625770240992,2.94397840268795,1.71434626192708,2.8396128985494,2.14592570952589,3.0522747492789,1.97629698872194,2.70766745253365,2.56099162021882,2.89376682581627,2.03706170768793,2.80571135828869,1.77952527186261,2.46261205938909,2.86461730218783,2.16911577660352,2.50778594275484,1.24905288968973,2.33931608445408,4.08255002691767,3.06061331310149,1.32354851471709,1.39120701372253 | |phase1_expression=0.960893082628764,18.1467211972468,15.0149748998547,39.6228116811947,40.0716583957078,5.70789524500425,7.70921713965235,7.48915275961142,2.111830832275,3.04283884218592,3.08192342805909,1.7549874978974,11.2992481754596,8.91688104673774,1.99865857089398,2.83465374345756,1.39912375625629,7.41336088591859,6.7186072466812,5.94145512517242,3.14660173558958,2.58156473122302,3.13439746966722,12.9593862462659,15.3704218315004,10.3361753540704,13.3536218809313,12.2818602630957,44.8455269917042,29.235495052152,14.4124831925948,0.635030673459631,0.61506478758457,0,2.88851619751275,1.49611180822643,1.42918549383658,21.7636447983192,11.720030167857,12.0410461113974,14.7057872007754,11.6117732442936,7.76816564849846,2.39203954153597,2.02753862439029,3.85448179539531,1.56478268869608,1.09012578190223,2.41654801007919,0.58328969722285,1.39986421625363,0,6.20795642413625,5.80289713609076,11.0910953717013,2.05807548828758,1.71920063963254,1.03134418455488,0.606949382578793,0.528990979272033,0.633831403506179,1.35537812827653,0.889294796111139,6.29929802096979,3.9554654502679,4.9733608046227,0.599200221036809,2.30530983192933,0.207379224616955,0.135005938331691,0.210324961351382,1.14260393761521,0.662605622854841,0.61245399607477,0.383381884072945,0,1.10115880999389,0.255374676170375,1.0752457327937,0.263772575460388,0.182975287204819,0.52091337055676,0.558365998002762,1.12552522006336,0.61119299110724,0.589257170947335,0.284743361598206,0.745597783301202,1.36307147999731,1.20914496170857,6.95674772884027,24.9522924324602,8.15965600449301,18.8896117073236,37.6870322119648,38.0822854032735,11.6568868709354,0.852151612890289,0.779358013808606,0.35333957451034,1.40843419776681,2.56652954828636,0,0,2.16491041011214,2.78695852022608,2.02209778005913,14.9580882431969,12.1700805314171,4.60170631100957,1.04091196059682,1.82679286987285,3.68984795609694,4.82312449768392,5.76184664964954,3.26733137457156,10.1349936771093,3.90418263683761,2.65383165584962,1.45590164952668,1.98757366614354,2.42437626567611,11.1835056730873,1.75668478206928,1.04723353406728,22.9911349687732,1.43778149407104,1.19980546198682,0.381210681219194,1.79748767285787,2.74500361691176,1.13088916901578,2.60736480288415,2.04572365864264,2.0778804455956,1.62241263067758,2.24046600470696,2.98576729464223,4.29628689337247,2.52530227063769,0.780722657776222,0.459804208866946,0.540186389416048,1.20563854268572,2.38127747029647,1.40925092313335,1.40552586839593,2.58703370739016,0.431135985865684,0.756424320671277,1.05570674498369,0.43839146485515,1.66828349535359,2.43776516565517,1.4404749548556,2.58744546864041,0.702213187313235,1.28673953557358,1.98914449576915,1.24275463521301,1.64168241986767,1.08037236876609,0.473489471170421,0.787056926989615,1.69693824176116,1.62773761325285,0.804820204198858,1.40118410840603,0.987359099480883,1.80584210487005,1.54030738137126,1.75439984910399,1.3173006917463,2.95254121272818,1.05144974282064,1.13195073617213,38.6589976091044,17.982638533121,1.2797295032114,1.62565670302307,1.28867461322093,3.42861991859682,4.89231696458715,10.2721838100782,18.0321043386914,18.4462829290892,6.03204501120647,6.36660710531683,8.38345574612217,34.1551375288604,24.6397376857151,22.1046813312348,0.379335801906163,1.37098215131675,1.1270773567308,0.814605311381257,0.969762435838129,1.68325967736765,2.08680572510049,2.50937251565324,3.29697328466887,4.44229790118482,36.1672205046322,0.500535317148282,0.393117990226406,0.674586337154561,1.62288097110802,1.68824011826692,4.07401362850272,12.9463261852865,12.4844124616777,11.8061407670875,8.62609239164127,10.0478055870496,9.04909252032226,14.6495749209325,16.5045620440159,20.7450714186248,3.69506380333209,0.568474235311454,0.814824882210129,1.18821560042632,1.40814148973101,2.34508760418542,2.61848004974615,4.09780660501378,1.57635144106191,2.43611158613652,2.55127629851979,5.24362607090362,3.9717545829156,6.07526046042349,7.53956419696361,3.26343410291226,3.93411418415229,4.41498794087572,1.28440471990234,3.04750385139728,0.491804836130026,1.51482556322624,0,0,0,0.716906393857656,2.00518806674155,2.54768877709949,1.21443210502468,0.876767573733936,1.18586333383957,1.92792789853084,4.11626247103979,1.95872164033981,3.09485222771795,4.45419332025846,3.98235415019888,1.45668381692989,1.51161778482376,0.565815239267694,1.77181135728464,1.22974059177571,5.16856586336442,0.727067458955011,1.42598951353889,3.47640433729398,3.16255825724996,2.06271086496374,3.40439605753788,0.540183282093931,1.68166288917581,1.92903331528433,3.54680467284547,3.38900753443934,2.63278432963394,5.78483403317739,3.98941903708308,8.89694697628045,2.42581237860458,2.4732937941222,3.55221738730992,1.5078231232039,1.3130957840345,0.984845398470368,19.2377352175701,2.41052892613663,3.2465467351592,1.23832120777933,3.70389054739423,1.69531611304222,2.46049609897845,2.51655990527175,3.0596117398894,2.79902904647316,4.00779924032829,3.81868247206045,1.10717597753397,1.21991680276109,1.18805874903981,1.46361807210128,2.18362563746178,2.15782954215713,2.64491058321075,1.83229159388821,19.9607058869361,6.21339313086926,0,2.0932316446157,0.827292452285488,1.75006069509643,1.80823752868824,2.36538575687089,3.0512882047896,2.8644964665669,2.30690557736564,1.44950472495604,0.864090018773596,4.74016680942267,1.62180172232131,1.84879722896689,1.68897069871134,1.61124026100733,1.78813219303138,3.24527713703916,2.80610101631697,3.02899349844443,4.34378797933499,4.33552596088414,5.06780979846713,6.44619338990207,9.46702907670709,2.94749498699775,2.21985953374065,1.34570784914214,1.84673078000486,2.70465431645067,2.064507229963,3.6630324853453,2.57242054894879,1.50471631210609,1.6942555278512,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,1.19707462020309,1.53660245178721,1.70174701947806,0.419226325255965,0,4.00044110042907,1.85431551515005,3.20919209591815,2.52697211763797,2.28131369901216,3.01802146217722,2.24739617927718,1.98477972455095,2.98664438569189,0.476293691283074,1.73826488917283,1.54327376370964,1.23625770240992,2.94397840268795,1.71434626192708,2.8396128985494,2.14592570952589,3.0522747492789,1.97629698872194,2.70766745253365,2.56099162021882,2.89376682581627,2.03706170768793,2.80571135828869,1.77952527186261,2.46261205938909,2.86461730218783,2.16911577660352,2.50778594275484,1.24905288968973,2.33931608445408,4.08255002691767,3.06061331310149,1.32354851471709,1.39120701372253 | ||
|short_description=p2@Cyp4f13 | |short_description=p2@Cyp4f13 | ||
}} | }} |
Latest revision as of 06:37, 26 September 2015
Short description: | p2@Cyp4f13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cyp4f13_5end |
Coexpression cluster: | MCL_coexpression_mm9:166 |
Association with transcript: | 0bp_to_ENSMUST00000137222, ENSMUST00000145683, NM_130882, uc008bxt.1, uc012apd.1_5end |
EntrezGene: | Cyp4f13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.90e-15 | 118 |
endoderm | 1.90e-15 | 118 |
presumptive endoderm | 1.90e-15 | 118 |
digestive system | 9.49e-15 | 116 |
digestive tract | 9.49e-15 | 116 |
primitive gut | 9.49e-15 | 116 |
subdivision of digestive tract | 9.00e-14 | 114 |
intestine | 1.24e-10 | 31 |
gastrointestinal system | 4.85e-08 | 47 |
gut epithelium | 8.28e-08 | 55 |
unilaminar epithelium | 1.42e-07 | 66 |
endo-epithelium | 4.10e-07 | 69 |
gland | 6.51e-07 | 65 |